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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Kamariah, N."

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Search Summary

This query matches 327 Structures.

Refinements

Structure Determination Methodology

experimental (327)

Scientific Name of Source Organism

	Methanothermobacter thermautotrophicus str. Delta H (61)
	Methanothermobacter thermautotrophicus (14)
	Escherichia coli (9)
	Halalkalibacterium halodurans C-125 (9)
	Saccharomyces cerevisiae (9)
	Enterococcus faecalis V583 (8)
	Escherichia coli K-12 (7)
	Homo sapiens (7)
	Streptomyces coelicolor (7)
	Mycobacterium tuberculosis H37Rv (6)

More...

Taxonomy

	Bacteria (205)
	Archaea (86)
	Eukaryota (32)
	unclassified sequences (4)

Experimental Method

X-RAY DIFFRACTION (327)

Polymer Entity Type

Protein (327)

Refinement Resolution (Å)

	1.0 - 1.5 (73)
	1.5 - 2.0 (147)
	2.0 - 2.5 (77)
	2.5 - 3.0 (24)
	3.0 - 3.5 (6)

Release Date

	1995 - 1999 (8)
	2000 - 2004 (21)
	2005 - 2009 (105)
	2010 - 2014 (171)
	2015 - 2019 (22)

Enzyme Classification Name

	Lyases (154)
	Isomerases (45)
	Hydrolases (27)
	Oxidoreductases (6)
	Transferases (6)
	Ligases (2)

Symmetry Type

	Cyclic (243)
	Asymmetric (92)
	Dihedral (66)

SCOP Classification

	Alpha and beta proteins (a/b) (189)
	Alpha and beta proteins (a+b) (92)
	Artifacts (40)
	All beta proteins (19)
	All alpha proteins (1)

AllSelected

1 to 25 of 327 Structures

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1CFY \| pdb_00001cfy	Download File View File

YEAST COFILIN, MONOCLINIC CRYSTAL FORM

Fedorov, A.A., Lappalainen, P., Fedorov, E.V., Drubin, D.G., Almo, S.C.

(1997) Nat Struct Biol 4: 366-369

Released	1997-04-01
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	COFILIN (protein)

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1COF \| pdb_00001cof	Download File View File

YEAST COFILIN, ORTHORHOMBIC CRYSTAL FORM

Fedorov, A.A., Lappalainen, P., Fedorov, E.V., Drubin, D.G., Almo, S.C.

(1997) Nat Struct Biol 4: 366-369

Released	1997-04-01
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	COFILIN (protein)

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1DFC \| pdb_00001dfc	Download File View File

CRYSTAL STRUCTURE OF HUMAN FASCIN, AN ACTIN-CROSSLINKING PROTEIN

Fedorov, A.A., Fedorov, E.V., Ono, S., Matsumura, F., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2010) J Mol Biology 400: 589-604

Released	2000-11-22
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens
Macromolecule	FASCIN (protein)

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1F2K \| pdb_00001f2k	Download File View File

CRYSTAL STRUCTURE OF ACANTHAMOEBA CASTELLANII PROFILIN II, CUBIC CRYSTAL FORM

Fedorov, A.A., Shi, W., Mahoney, N., Kaiser, D.A., Almo, S.C.

To be published

Released	2000-06-08
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Acanthamoeba castellanii
Macromolecule	PROFILIN II (protein)

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1G5U \| pdb_00001g5u	Download File View File

LATEX PROFILIN HEVB8

Fedorov, A.A., Fedorov, E.V., Ganglberger, E., Breiteneder, H., Almo, S.C.

To be published

Released	2000-11-22
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Hevea brasiliensis
Macromolecule	PROFILIN (protein)
Unique Ligands	NA

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1HQZ \| pdb_00001hqz	Download File View File

Cofilin homology domain of a yeast actin-binding protein ABP1P

Strokopytov, B.V., Fedorov, A.A., Mahoney, N., Drubin, D.G., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2005) Acta Crystallogr D Biol Crystallogr 61: 285-293

Released	2001-12-21
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	ACTIN-BINDING PROTEIN (protein)

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1NLX \| pdb_00001nlx	Download File View File

Crystal Structure of PHL P 6, A Major Timothy Grass Pollen Allergen Co-Crystallized with Zinc

Fedorov, A.A., Ball, T., Fedorov, E.V., Vrtala, S., Valenta, R., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2003-01-21
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Phleum pratense
Macromolecule	Pollen allergen Phl p 6 (protein)
Unique Ligands	ARS, ZN

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1Q2Y \| pdb_00001q2y	Download File View File

Crystal structure of the protein YJCF from Bacillus subtilis: a member of the GCN5-related N-acetyltransferase superfamily fold

Fedorov, A.A., Ramagopal, U.A., Fedorov, E.V., Thirumuruhan, R., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2003-08-19
Method	X-RAY DIFFRACTION 2 Å
Organisms	Bacillus subtilis
Macromolecule	similar to hypothetical proteins (protein)

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1Q6W \| pdb_00001q6w	Download File View File

X-Ray structure of Monoamine oxidase regulatory protein from Archaeoglobus fulgius

Fedorov, A.A., Fedorov, E.V., Thirumuruhan, R., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2003-11-18
Method	X-RAY DIFFRACTION 2.81 Å
Organisms	Archaeoglobus fulgidus DSM 4304
Macromolecule	monoamine oxidase regulatory protein, putative (protein)

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1QPV \| pdb_00001qpv	Download File View File

YEAST COFILIN

Fedorov, A.A., Lappalainen, P., Fedorov, E.V., Drubin, D.G., Almo, S.C.

(1997) Nat Struct Biol 4: 366-369

Released	1999-06-08
Method	X-RAY DIFFRACTION 3 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	YEAST COFILIN (protein)

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1RC6 \| pdb_00001rc6	Download File View File

Crystal structure of protein Ylba from E. coli, Pfam DUF861

Fedorov, A.A., Fedorov, E.V., Thirumuruhan, R., Ramagopal, U.A., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2003-11-18
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Escherichia coli
Macromolecule	Hypothetical protein ylbA (protein)

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1RNM \| pdb_00001rnm	Download File View File

RIBONUCLEASE A COMPLEX WITH CYTIDYLIC ACID (5'CMP) CRYSTALLIZED FROM 80% AMMONIUM SULPHATE

Fedorov, A.A., Almo, S.C.

To be published

Released	1996-04-03
Method	X-RAY DIFFRACTION 2 Å
Organisms	Bos taurus
Macromolecule	RIBONUCLEASE A (protein)
Unique Ligands	C5P, SO4

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1RNN \| pdb_00001rnn	Download File View File

RIBONUCLEASE A COMPLEX WITH CYTIDYLIC ACID (5'CMP) CRYSTALLIZED FROM 8M SODIUM FORMATE

Fedorov, A.A., Almo, S.C.

To be published

Released	1996-04-03
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Bos taurus
Macromolecule	RIBONUCLEASE A (protein)
Unique Ligands	C5P, FMT

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1RVK \| pdb_00001rvk	Download File View File

Crystal structure of enolase AGR_L_2751 from Agrobacterium Tumefaciens

Fedorov, A.A., Fedorov, E.V., Thirumuruhan, R., Zencheck, W., Millikin, C., Gerlt, J.A., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2003-12-23
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Agrobacterium fabrum str. C58
Macromolecule	isomerase/lactonizing enzyme (protein)
Unique Ligands	MG

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1SEF \| pdb_00001sef	Download File View File

Crystal structure of cupin domain protein EF2996 from Enterococcus faecalis

Fedorov, A.A., Fedorov, E.V., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2004-06-22
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Enterococcus faecalis V583
Macromolecule	conserved hypothetical protein (protein)

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1SFN \| pdb_00001sfn	Download File View File

Crystal structure of protein DR1152 from Deinococcus radiodurans R1, Pfam DUF861

Fedorov, A.A., Fedorov, E.V., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2004-06-22
Method	X-RAY DIFFRACTION 2.46 Å
Organisms	Deinococcus radiodurans
Macromolecule	conserved hypothetical protein (protein)

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1SV6 \| pdb_00001sv6	Download File View File

Crystal structure of 2-hydroxypentadienoic acid hydratase from Escherichia Coli

Fedorov, A.A., Fedorov, E.V., Sharp, A., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2004-06-22
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Escherichia coli
Macromolecule	2-keto-4-pentenoate hydratase (protein)

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1SVY \| pdb_00001svy	Download File View File

SEVERIN DOMAIN 2, 1.75 ANGSTROM CRYSTAL STRUCTURE

Puius, Y.A., Fedorov, E.V., Eichinger, L., Sullivan, M., Schleicher, M., Almo, S.C.

(2000) Biochemistry 39: 5322-5331

Released	1999-08-10
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Dictyostelium discoideum
Macromolecule	SEVERIN (protein)
Unique Ligands	CA, NA

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1T62 \| pdb_00001t62	Download File View File

Crystal structure of protein EF3133 from Enterococcus faecalis V583, Pfam DUF984

Fedorov, A.A., Fedorov, E.V., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2004-06-22
Method	X-RAY DIFFRACTION 3 Å
Organisms	Enterococcus faecalis V583
Macromolecule	conserved hypothetical protein (protein)

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1TEL \| pdb_00001tel	Download File View File

Crystal structure of a RubisCO-like protein from Chlorobium tepidum

Fedorov, A.A., Fedorov, E.V., Imker, H.J., Gerlt, J.A., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2004-10-05
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Chlorobaculum tepidum TLS
Macromolecule	ribulose bisphosphate carboxylase, large subunit (protein)

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1TZZ \| pdb_00001tzz	Download File View File

Crystal structure of the protein L1841, unknown member of enolase superfamily from Bradyrhizobium japonicum

Fedorov, A.A., Fedorov, E.V., Yew, W.S., Gerlt, J.A., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2004-10-05
Method	X-RAY DIFFRACTION 1.86 Å
Organisms	Bradyrhizobium japonicum
Macromolecule	Hypothetical protein L1841 (protein)
Unique Ligands	MG

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1WHO \| pdb_00001who	Download File View File

ALLERGEN PHL P 2

Fedorov, A.A., Fedorov, E.V., Dolecek, C., Susani, M., Valenta, R., Almo, S.C.

To be published

Released	1997-07-07
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Phleum pratense
Macromolecule	ALLERGEN PHL P 2 (protein)

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1WHP \| pdb_00001whp	Download File View File

ALLERGEN PHL P 2

Fedorov, A.A., Fedorov, E.V., Dolecek, C., Susani, M., Valenta, R., Almo, S.C.

To be published

Released	1997-07-07
Method	X-RAY DIFFRACTION 3 Å
Organisms	Phleum pratense
Macromolecule	ALLERGEN PHL P 2 (protein)

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1WUE \| pdb_00001wue	Download File View File

Crystal structure of protein GI:29375081, unknown member of enolase superfamily from enterococcus faecalis V583

Fedorov, A.A., Fedorov, E.V., Yew, W.S., Gerlt, J.A., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2014) Proc Natl Acad Sci U S A 111: 8535-8540

Released	2004-12-21
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Enterococcus faecalis V583
Macromolecule	mandelate racemase/muconate lactonizing enzyme family protein (protein)

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1WUF \| pdb_00001wuf	Download File View File

Crystal structure of protein GI:16801725, member of Enolase superfamily from Listeria innocua Clip11262

Fedorov, A.A., Fedorov, E.V., Yew, W.S., Gerlt, J.A., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2014) Proc Natl Acad Sci U S A 111: 8535-8540

Released	2004-12-21
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Listeria innocua Clip11262
Macromolecule	hypothetical protein lin2664 (protein)
Unique Ligands	MG

1 to 25 of 327 Structures

Page 1 of 14

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1CFY | pdb_00001cfy

1COF | pdb_00001cof

1DFC | pdb_00001dfc

1F2K | pdb_00001f2k

1G5U | pdb_00001g5u

1HQZ | pdb_00001hqz

1NLX | pdb_00001nlx

1Q2Y | pdb_00001q2y

1Q6W | pdb_00001q6w

1QPV | pdb_00001qpv

1RC6 | pdb_00001rc6

1RNM | pdb_00001rnm

1RNN | pdb_00001rnn

1RVK | pdb_00001rvk

1SEF | pdb_00001sef

1SFN | pdb_00001sfn

1SV6 | pdb_00001sv6

1SVY | pdb_00001svy

1T62 | pdb_00001t62

1TEL | pdb_00001tel

1TZZ | pdb_00001tzz

1WHO | pdb_00001who

1WHP | pdb_00001whp

1WUE | pdb_00001wue

1WUF | pdb_00001wuf