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RCSB Protein Data Bank (RCSB PDB) enables breakthroughs in science and education by providing access and tools for exploration, visualization, and analysis of:
Experimentally-determined 3D structures from the Protein Data Bank (PDB) archive | |
Computed Structure Models (CSM) from AlphaFold DB and ModelArchive |
These data can be explored in context of external annotations providing a structural view of biology.
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PanDDA analysis group deposition -- Crystal structure of HRP-2 PWWP domain in complex with Z285782452
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Crystal structure of human NUAK1-MARK3 kinase domain chimera bound with azepane (R)-#50 small molecule inhibitor
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Structure of a solute binding protein from Desulfonauticus sp. bound to L-tryptophan
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RIP2K kinase domain dimer with bound compound 37 (N399), a speific NOD1 pathway inhibitor
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Read about Accelerating protein structure volume analysis through vectorized 3D Zernike moments and Python-based GPU integration
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This virtual course introduces life scientists to the power and flexibility of Python Scripting for Molecular Docking
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Read about Using augmented reality in molecular case studies to enhance biomolecular structure-function explorations in undergraduate classrooms
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Please take this brief survey and be entered into a drawing for a mug featuring the artwork of David S. Goodsell.
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wwPDB to deprecate FTP download protocol in the PDB archive
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The wwPDB Foundation made an award to Aubrey Putansu at The Protein Society meeting for An Expanded Integrator Sensor Motif for GPCR Ligand Detection
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Join us for free upcoming virtual events: Mol* Office Hour (Nov 4), BCIF Webinar (Nov 4), and Extended PDB ID Office Hour (Nov 9)
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The wwPDB Foundation awarded Zaighum Abbas at the Latin American Crystallographic Association Meeting for The Role of SEPT7 in Magnaporthe oryzae: Structural Insights and Functional Implications
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Congratulations to David Baker, who was recognized for computational protein design, and to Demis Hassabis and John M. Jumper, who were recognized for protein structure prediction. These achievements also celebrate the work of the PDB depositor community and the PDB archive that underpinned development of their prediction methods.
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PDB-101 materials explore the structural biology of athletics and well-being. Explore how supersweet proteins trick our taste receptors in Monellin» 12/17/2024
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This image of Bacteriophage T4 Infection was selected as a National Jury's Choice Award: United States in the 2023 Wiki Science Competition in the United States.» 12/10/2024
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Attention High School Teachers and Students: Protein Modeling Event is back as a Trial Event» 11/26/2024
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Cassandra Hayne and Phoebe Rice (The University of Chicago) describe downloadable Paper Nucleic Acid Models for Hands-on Education» 11/25/2024
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Open access to the PDB facilitated discovery/development of 100% of the 34 new low molecular weight, protein-targeted, antineoplastic agents approved by the US FDA 2019–2023.» 11/21/2024
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PDB-101 materials explore the structural biology of athletics and well-being. Learn about the molecular switch that responds to changing oxygen levels in Hypoxia-Inducible Factors» 11/21/2024
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PDB structures help us understand resistance to antibiotics and develop new ways to fight infection» 11/17/2024
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PDB structures reveal how glucose levels are regulated in the body and provide new hope for combating the disease.» 11/13/2024
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Visit the poster Streamlining Programmatic Access to Structural Biology Data with Python to learn about recent software development; meet Rutgers members in booth #1740 to learn about the summer internships and gap year opportunities» 11/10/2024
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Read about An Extension of the PDBx/mmCIF Data Standard for Integrative Structure Determination Methods» 11/05/2024
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The parasite that causes malaria exports hundreds of proteins to remodel the cells that it infects.
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In this Issue: Fall Training Opportunities; A Biocurator Milestone of >10,000 Depositions Processed; Influenza Virus painting; and more.
Education Corner: Paper Nucleic Acid Models for Hands-on Education by Cassandra K. Hayne and Phoebe A. Rice, The University of Chicago
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Download the 2023 Annual Report (PDF) for an overview of recent activities, including RCSB PDB APIs and pairwise alignment tools.
