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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Jaeger, K.E."

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Search Summary

This query matches 49 Structures.

Refinements

Structure Determination Methodology

experimental (49)

Scientific Name of Source Organism

	Chloroflexus aggregans DSM 9485 (7)
	unidentified (7)
	Dinoroseobacter shibae DFL 12 = DSM 16493 (6)
	Pseudomonas putida KT2440 (5)
	Acidihalobacter (4)
	Pseudomonas aeruginosa (3)
	Pseudomonas aeruginosa PAO1 (3)
	Halopseudomonas aestusnigri (2)
	Pseudomonas fluorescens (2)
	Pseudonocardia thermophila (2)

More...

Taxonomy

	Bacteria (39)
	unclassified sequences (7)
	Archaea (2)
	Eukaryota (1)

Experimental Method

	X-RAY DIFFRACTION (47)
	SOLUTION NMR (2)

Polymer Entity Type

Protein (49)

Refinement Resolution (Å)

	1.0 - 1.5 (7)
	1.5 - 2.0 (22)
	2.0 - 2.5 (3)
	2.5 - 3.0 (9)
	3.0 - 3.5 (3)
	3.5 - 4.0 (3)

Release Date

	2000 - 2004 (2)
	2005 - 2009 (3)
	2010 - 2014 (6)
	2015 - 2019 (18)
	2020 - 2024 (20)

Enzyme Classification Name

	Transferases (12)
	Hydrolases (6)
	Oxidoreductases (1)

Membrane Protein Annotation

OPM (1)

Symmetry Type

	Cyclic (30)
	Asymmetric (14)
	Dihedral (5)

SCOP Classification

	Alpha and beta proteins (a+b) (18)
	Artifacts (9)
	Alpha and beta proteins (a/b) (5)
	All beta proteins (1)

AllSelected

1 to 25 of 49 Structures

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1EX9 \| pdb_00001ex9	Download File View File

CRYSTAL STRUCTURE OF THE PSEUDOMONAS AERUGINOSA LIPASE COMPLEXED WITH RC-(RP,SP)-1,2-DIOCTYLCARBAMOYL-GLYCERO-3-O-OCTYLPHOSPHONATE

Nardini, M., Lang, D.A., Liebeton, K., Jaeger, K.-E., Dijkstra, B.W.

(2000) J Biological Chem 275: 31219-31225

Released	2000-10-18
Method	X-RAY DIFFRACTION 2.54 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	LACTONIZING LIPASE (protein)
Unique Ligands	CA, OCP

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1I6W \| pdb_00001i6w	Download File View File

THE CRYSTAL STRUCTURE OF BACILLUS SUBTILIS LIPASE: A MINIMAL ALPHA/BETA HYDROLASE ENZYME

van Pouderoyen, G., Eggert, T., Jaeger, K.-E., Dijkstra, B.W.

(2001) J Mol Biology 309: 215-226

Released	2001-05-23
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Bacillus subtilis
Macromolecule	LIPASE A (protein)
Unique Ligands	CD

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2QUA \| pdb_00002qua	Download File View File

Crystal structure of LipA from Serratia marcescens

Meier, R., Baumann, U.

(2007) J Biological Chem 282: 31477-31483

Released	2007-08-28
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Serratia marcescens
Macromolecule	Extracellular lipase (protein)
Unique Ligands	CA

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2QUB \| pdb_00002qub	Download File View File

Crystal structure of extracellular lipase LipA from Serratia marcescens

Meier, R., Baumann, U.

(2007) J Biological Chem 282: 31477-31483

Released	2007-08-28
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Serratia marcescens
Macromolecule	Extracellular lipase (protein)
Unique Ligands	CA

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3DCQ \| pdb_00003dcq	Download File View File

LECB (PA-LII) in complex with the synthetic ligand 2G0

Johansson, E.M., Crusz, S.A., Kolomiets, E., Buts, L., Kadam, R.U., Cacciarini, M., Bartels, K.M., Diggle, S.P., Camara, M., Williams, P., Loris, R., Nativi, C., Rosenau, F., Jaeger, K.E., Darbre, T., Reymond, J.L.

(2008) Chem Biol 15: 1249-1257

Released	2009-01-13
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	Fucose-binding lectin PA-IIL (protein)
Unique Ligands	2G0, CA

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3SW1 \| pdb_00003sw1	Download File View File

Structure of a full-length bacterial LOV protein

Granzin, J., Batra-Safferling, R., Jaeger, K.-E., Drepper, T., Krauss, U.

(2012) J Mol Biology 417: 362-374

Released	2012-02-15
Method	X-RAY DIFFRACTION 2.63 Å
Organisms	Pseudomonas putida KT2440
Macromolecule	Sensory box protein (protein)
Unique Ligands	FMN

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4FBL \| pdb_00004fbl	Download File View File

LipS and LipT, two metagenome-derived lipolytic enzymes increase the diversity of known lipase and esterase families

Chow, J., Krauss, U., Dall Antonia, Y., Fersini, F., Schmeisser, C., Schmidt, M., Menyes, I., Bornscheuer, U., Lauinger, B., Bongen, P., Pietruszka, J., Eckstein, M., Thum, O., Liese, A., Mueller-Dieckmann, J., Jaeger, K.-E., Kovacic, F., Streit, W.R., Structural Proteomics in Europe (SPINE)

(2012) PLoS One 7: e47665-e47665

Released	2012-10-10
Method	X-RAY DIFFRACTION 1.99 Å
Organisms	unidentified
Macromolecule	LipS lipolytic enzyme (protein)
Unique Ligands	CL, SPD

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4FBM \| pdb_00004fbm	Download File View File

LipS and LipT, two metagenome-derived lipolytic enzymes increase the diversity of known lipase and esterase families

Chow, J., Krauss, U., Dall Antonia, Y., Fersini, F., Schmeisser, C., Schmidt, M., Menyes, I., Bornscheuer, U., Lauinger, B., Bongen, P., Pietruszka, J., Eckstein, M., Thum, O., Liese, A., Mueller-Dieckmann, J., Jaeger, K.-E., Kovavic, F., Streit, W.R., Structural Proteomics in Europe (SPINE)

(2012) PLoS One 7: e47665-e47665

Released	2012-10-10
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	unidentified
Macromolecule	LipS lipolytic enzyme (protein)
Unique Ligands	BR

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4JGG \| pdb_00004jgg	Download File View File

Crystal Structure of TesA

Kovacic, F., Granzin, J., Batra-Safferling, R., Jaeger, K.-E.

(2013) PLoS One 8: e69125-e69125

Released	2013-08-14
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	Esterase TesA (protein)

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4KUK \| pdb_00004kuk	Download File View File

A superfast recovering full-length LOV protein from the marine phototrophic bacterium Dinoroseobacter shibae (Dark state)

Circolone, F., Granzin, J., Stadler, A., Krauss, U., Drepper, T., Endres, S., Knieps-Gruenhagen, E., Wirtz, A., Willbold, D., Batra-Safferling, R., Jaeger, K.-E.

(2015) BMC Microbiol 15: 30-30

Released	2014-11-26
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Dinoroseobacter shibae DFL 12 = DSM 16493
Macromolecule	blue-light photoreceptor (protein)
Unique Ligands	ACY, RBF

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4KUO \| pdb_00004kuo	Download File View File

A superfast recovering full-length LOV protein from the marine phototrophic bacterium Dinoroseobacter shibae (Photoexcited state)

Circolone, F., Granzin, J., Stadler, A., Krauss, U., Drepper, T., Endres, S., Knieps-Gruenhagen, E., Wirtz, A., Willbold, D., Batra-Safferling, R., Jaeger, K.-E.

(2015) BMC Microbiol 15: 30-30

Released	2014-11-26
Method	X-RAY DIFFRACTION 2 Å
Organisms	Dinoroseobacter shibae DFL 12 = DSM 16493
Macromolecule	blue-light photoreceptor (protein)
Unique Ligands	RBF

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4Q3K \| pdb_00004q3k	Download File View File

Crystal structure of MGS-M1, an alpha/beta hydrolase enzyme from a Medee basin deep-sea metagenome library

Stogios, P.J., Xu, X., Cui, H., Alcaide, M., Ferrer, M., Savchenko, A.

(2015) Environ Microbiol 17: 332-345

Released	2015-02-25
Method	X-RAY DIFFRACTION 1.57 Å
Organisms	unidentified
Macromolecule	MGS-M1 (protein)
Unique Ligands	CL, F, PGE

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4Q3L \| pdb_00004q3l	Download File View File

Crystal structure of MGS-M2, an alpha/beta hydrolase enzyme from a Medee basin deep-sea metagenome library

Stogios, P.J., Xu, X., Cui, H., Alcaide, M., Ferrer, M., Savchenko, A.

(2015) Environ Microbiol 17: 332-345

Released	2015-02-25
Method	X-RAY DIFFRACTION 3.01 Å
Organisms	unidentified
Macromolecule	MGS-M2 (protein)
Unique Ligands	GOL

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4Q3M \| pdb_00004q3m	Download File View File

Crystal structure of MGS-M4, an aldo-keto reductase enzyme from a Medee basin deep-sea metagenome library

Stogios, P.J., Xu, X., Cui, H., Alcaide, M., Ferrer, M., Savchenko, A.

(2015) Environ Microbiol 17: 332-345

Released	2015-02-25
Method	X-RAY DIFFRACTION 2.552 Å
Organisms	unidentified
Macromolecule	MGS-M4 (protein)
Unique Ligands	NA, SO4

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4Q3N \| pdb_00004q3n	Download File View File

Crystal structure of MGS-M5, a lactate dehydrogenase enzyme from a Medee basin deep-sea metagenome library

Stogios, P.J., Xu, X., Cui, H., Alcaide, M., Ferrer, M., Savchenko, A.

(2015) Environ Microbiol 17: 332-345

Released	2015-02-25
Method	X-RAY DIFFRACTION 1.97 Å
Organisms	unidentified
Macromolecule	MGS-M5 (protein)
Unique Ligands	ACT, CL, GOL, NA, PGE, TRS

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4Q3O \| pdb_00004q3o	Download File View File

Crystal structure of MGS-MT1, an alpha/beta hydrolase enzyme from a Lake Matapan deep-sea metagenome library

Stogios, P.J., Xu, X., Cui, H., Alcaide, M., Ferrer, M., Savchenko, A.

(2015) Environ Microbiol 17: 332-345

Released	2015-03-04
Method	X-RAY DIFFRACTION 1.74 Å
Organisms	unidentified
Macromolecule	MGS-MT1 (protein)
Unique Ligands	CL, GOL, MES

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5J3W \| pdb_00005j3w	Download File View File

Crystal structures reveal signaling states of a short blue light photoreceptor protein PpSB1-LOV (dark state)

Granzin, J., Batra-Safferling, R.

(2016) J Mol Biology 428: 3721-3736

Released	2016-06-22
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Pseudomonas putida KT2440
Macromolecule	Sensory box protein (protein)
Unique Ligands	FMN

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5J4E \| pdb_00005j4e	Download File View File

Crystal structures reveal signaling states of a short blue light photoreceptor protein PpSB1-LOV (Photoexcited state)

Granzin, J., Batra-Safferling, R.

(2016) J Mol Biology 428: 3721-3736

Released	2016-06-22
Method	X-RAY DIFFRACTION 2.67 Å
Organisms	Pseudomonas putida
Macromolecule	Sensory box protein (protein)
Unique Ligands	FMN

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5LUV \| pdb_00005luv	Download File View File

Short LOV protein W619_1 in apo-state

Arinkin, V., Granzin, J., Batra-Safferling, R.

(2017) Sci Rep 7: 42971-42971

Released	2017-02-22
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Pseudomonas putida W619
Macromolecule	Putative PAS/PAC sensor protein (protein)
Unique Ligands	CL, SO4

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5OVM \| pdb_00005ovm	Download File View File

Solution structure of lipase binding domain LID1 of foldase from Pseudomonas aeruginosa

Viegas, A., Jaeger, K.-E., Etzkorn, M., Gohlke, H., Verma, N., Dollinger, P., Kovacic, F.

(2020) Sci Rep 10: 3578-3578

Released	2018-12-12
Method	SOLUTION NMR
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	Lipase chaperone (protein)

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6GAY \| pdb_00006gay	Download File View File

A fast recovering full-length LOV protein (DsLOV) from the marine phototrophic bacterium Dinoroseobacter shibae (Dark state) - M49I mutant

Granzin, J., Batra-Safferling, R., Roellen, K.

(2018) Biochemistry 57: 4833-4847

Released	2018-07-18
Method	X-RAY DIFFRACTION 1.86 Å
Organisms	Dinoroseobacter shibae DFL 12 = DSM 16493
Macromolecule	Putative blue-light photoreceptor (protein)
Unique Ligands	FMN, SO4

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6GB3 \| pdb_00006gb3	Download File View File

A fast recovering full-length LOV protein (DsLOV) from the marine phototrophic bacterium Dinoroseobacter shibae (Dark state) - M49S mutant

Granzin, J., Batra-Safferling, R., Roellen, K.

(2018) Biochemistry 57: 4833-4847

Released	2018-07-18
Method	X-RAY DIFFRACTION 1.752 Å
Organisms	Dinoroseobacter shibae DFL 12 = DSM 16493
Macromolecule	Putative blue-light photoreceptor (protein)
Unique Ligands	FMN

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6GBA \| pdb_00006gba	Download File View File

A fast recovering full-length LOV protein (DsLOV) from the marine phototrophic bacterium Dinoroseobacter shibae (Dark state) - M49A mutant

Granzin, J., Batra-Safferling, R., Roellen, K.

(2018) Biochemistry 57: 4833-4847

Released	2018-07-18
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Dinoroseobacter shibae DFL 12 = DSM 16493
Macromolecule	Putative blue-light photoreceptor (protein)
Unique Ligands	FMN

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6GBV \| pdb_00006gbv	Download File View File

A fast recovering full-length LOV protein (DsLOV) from the marine phototrophic bacterium Dinoroseobacter shibae (Dark state) - M49T mutant

Granzin, J., Batra-Safferling, R., Roellen, K.

(2018) Biochemistry 57: 4833-4847

Released	2018-07-18
Method	X-RAY DIFFRACTION 1.63 Å
Organisms	Dinoroseobacter shibae DFL 12 = DSM 16493
Macromolecule	Putative blue-light photoreceptor (protein)
Unique Ligands	FMN, PO4