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234,785 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Snell, G."

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Search Summary

This query matches 68 Structures.

Refinements

Structure Determination Methodology

experimental (68)

Scientific Name of Source Organism

	Homo sapiens (64)
	Severe acute respiratory syndrome coronavirus 2 (19)
	Influenza A virus (9)
	Escherichia phage T7 (6)
	Mannheimia haemolytica (3)
	Escherichia coli K-12 (1)
	Influenza B virus (1)
	Tequatrovirus T4 (1)

Taxonomy

	Eukaryota (64)
	Riboviria (29)
	Duplodnaviria (7)
	Bacteria (4)

Experimental Method

	X-RAY DIFFRACTION (50)
	ELECTRON MICROSCOPY (18)

Polymer Entity Type

Protein (68)

Refinement Resolution (Å)

	1.0 - 1.5 (10)
	1.5 - 2.0 (16)
	2.0 - 2.5 (17)
	2.5 - 3.0 (12)
	3.0 - 3.5 (9)
	3.5 - 4.0 (3)
	4.0 - 4.5 (1)

Release Date

	2000 - 2004 (7)
	2010 - 2014 (1)
	2015 - 2019 (24)
	2020 - 2024 (36)

Enzyme Classification Name

	Hydrolases (22)
	Oxidoreductases (4)

Membrane Protein Annotation

	MemProtMD (2)
	OPM (2)
	PDBTM (2)
	mpstruc (2)

Symmetry Type

	Asymmetric (47)
	Cyclic (23)

SCOP Classification

	All beta proteins (11)
	Alpha and beta proteins (a/b) (16)
	Alpha and beta proteins (a+b) (13)
	Artifacts (11)
	All alpha proteins (4)

AllSelected

1 to 25 of 68 Structures

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1Q35 \| pdb_00001q35	Download File View File

Crystal Structure of Pasteurella haemolytica Apo Ferric ion-Binding Protein A

Shouldice, S.R., Dougan, D.R., Skene, R.J., Snell, G., Scheibe, D., Williams, P.A., Kirby, S., McRee, D.E., Schryvers, A.B., Tari, L.W.

(2003) J Biological Chem 278: 41093-41098

Released	2003-11-11
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Mannheimia haemolytica
Macromolecule	iron binding protein FbpA (protein)
Unique Ligands	EDO, FMT

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1SI0 \| pdb_00001si0	Download File View File

Crystal Structure of Mannheimia haemolytica Ferric iron-Binding Protein A in a closed conformation

Shouldice, S.R., Skene, R.J., Dougan, D.R., Snell, G., McRee, D.E., Schryvers, A.B., Tari, L.W.

(2004) J Bacteriol 186: 3903-3910

Released	2004-06-08
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Mannheimia haemolytica
Macromolecule	iron binding protein FbpA (protein)
Unique Ligands	CO3, EDO, FE

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1SI1 \| pdb_00001si1	Download File View File

Crystal Structure of Mannheimia haemolytica Ferric iron-Binding Protein A in an open conformation

Shouldice, S.R., Skene, R.J., Dougan, D.R., Snell, G., McRee, D.E., Schryvers, A.B., Tari, L.W.

(2004) J Bacteriol 186: 3903-3910

Released	2004-06-08
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Mannheimia haemolytica
Macromolecule	iron binding protein FbpA (protein)
Unique Ligands	FE

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1T64 \| pdb_00001t64	Download File View File

Crystal Structure of human HDAC8 complexed with Trichostatin A

Somoza, J.R., Skene, R.J., Katz, B.A., Mol, C., Ho, J.D., Jennings, A.J., Luong, C., Arvai, A., Buggy, J.J., Chi, E., Tang, J., Sang, B.-C., Verner, E., Wynands, R., Leahy, E.M., Dougan, D.R., Snell, G., Navre, M., Knuth, M.W., Swanson, R.V., McRee, D.E., Tari, L.W.

(2004) Structure 12: 1325-1334

Released	2004-07-27
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Histone deacetylase 8 (protein)
Unique Ligands	CA, NA, TSN, ZN

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1T67 \| pdb_00001t67	Download File View File

Crystal Structure of Human HDAC8 complexed with MS-344

(2004) Structure 12: 1325-1334

Released	2004-07-27
Method	X-RAY DIFFRACTION 2.31 Å
Organisms	Homo sapiens
Macromolecule	Histone deacetylase 8 (protein)
Unique Ligands	B3N, NA, ZN

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1T69 \| pdb_00001t69	Download File View File

Crystal Structure of human HDAC8 complexed with SAHA

(2004) Structure 12: 1325-1334

Released	2004-07-27
Method	X-RAY DIFFRACTION 2.91 Å
Organisms	Homo sapiens
Macromolecule	Histone deacetylase 8 (protein)
Unique Ligands	SHH, ZN

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1VKG \| pdb_00001vkg	Download File View File

Crystal Structure of Human HDAC8 complexed with CRA-19156

(2004) Structure 12: 1325-1334

Released	2004-07-27
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	Histone deacetylase 8 (protein)
Unique Ligands	CRI, NA, ZN

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4PHU \| pdb_00004phu	Download File View File

Crystal structure of Human GPR40 bound to allosteric agonist TAK-875

Srivastava, A., Yano, J.K., Hirozane, Y., Kefala, G., Snell, G., Lane, W., Gruswitz, F., Ivetac, A., Aertgeerts, K., Nguyen, J., Jennings, A., Okada, K.

(2014) Nature 513: 124-127

Released	2014-07-16
Method	X-RAY DIFFRACTION 2.332 Å
Organisms	Homo sapiens Tequatrovirus T4
Macromolecule	Free fatty acid receptor 1,Lysozyme (protein)
Unique Ligands	1PE, 2YB, DMS, OLC

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4ZYO \| pdb_00004zyo	Download File View File

Crystal Structure of Human Integral Membrane Stearoyl-CoA Desaturase with Substrate

Wang, H., Klein, M.G., Lane, W., Snell, G., Levin, I., Li, K., Zou, H., Sang, B.-C.

(2015) Nat Struct Mol Biol 22: 581-585

Released	2015-06-17
Method	X-RAY DIFFRACTION 3.25 Å
Organisms	Homo sapiens
Macromolecule	Acyl-CoA desaturase (protein)
Unique Ligands	LMT, ST9, ZN

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5B25 \| pdb_00005b25	Download File View File

Crystal structure of human PDE1B with inhibitor 3

Ida, K., Lane, W., Snell, G., Sogabe, S.

(2016) J Med Chem 59: 1149-1164

Released	2016-02-03
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B (protein)
Unique Ligands	4QJ, GOL, MG, SO4, ZN

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5H5Q \| pdb_00005h5q	Download File View File

Crystal structure of human GPX4 in complex with GXpep-1

Sogabe, S., Kadotani, A., Lane, W., Snell, G.

(2017) Biochem Biophys Res Commun 482: 195-201

Released	2016-12-07
Method	X-RAY DIFFRACTION 1.1 Å
Organisms	Escherichia phage T7 Homo sapiens
Macromolecule	GXpep-1 (protein) Phospholipid hydroperoxide glutathione peroxidase, mitochondrial (protein)
Unique Ligands	GOL

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5H5R \| pdb_00005h5r	Download File View File

Crystal structure of human GPX4 in complex with GXpep-2

Sogabe, S., Kadotani, A., Lane, W., Snell, G.

(2017) Biochem Biophys Res Commun 482: 195-201

Released	2016-12-07
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Escherichia phage T7 Homo sapiens
Macromolecule	GXpep-2 (protein) Phospholipid hydroperoxide glutathione peroxidase, mitochondrial (protein)
Unique Ligands	GOL

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5H5S \| pdb_00005h5s	Download File View File

Crystal structure of human GPX4 in complex with GXpep-3

Sogabe, S., Kadotani, A., Lane, W., Snell, G.

(2017) Biochem Biophys Res Commun 482: 195-201

Released	2016-12-07
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Escherichia phage T7 Homo sapiens
Macromolecule	GXpep-3 (protein) Phospholipid hydroperoxide glutathione peroxidase, mitochondrial (protein)
Unique Ligands	GOL

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5H7G \| pdb_00005h7g	Download File View File

Crystal structure of the BCL6 BTB domain in complex with F1324

Sogabe, S., Ida, K., Lane, W., Snell, G.

(2017) Biochem Biophys Res Commun 482: 310-316

Released	2016-12-07
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Escherichia phage T7 Homo sapiens
Macromolecule	B-cell lymphoma 6 protein (protein) F1324 peptide (protein)
Unique Ligands	SO4

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5H7H \| pdb_00005h7h	Download File View File

Crystal structure of the BCL6 BTB domain in complex with F1324(10-13)

Sogabe, S., Ida, K., Lane, W., Snell, G.

(2017) Biochem Biophys Res Commun 482: 310-316

Released	2016-12-07
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Escherichia phage T7 Homo sapiens
Macromolecule	B-cell lymphoma 6 protein (protein) F1324 peptide residues 10-13 (protein)
Unique Ligands	EDO

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5X4M \| pdb_00005x4m	Download File View File

Crystal structure of the BCL6 BTB domain in complex with Compound 1

Sogabe, S., Ida, K., Lane, W., Snell, G.

(2017) J Med Chem 60: 4358-4368

Released	2017-05-24
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Homo sapiens
Macromolecule	B-cell lymphoma 6 protein (protein)
Unique Ligands	7ZF

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5X4N \| pdb_00005x4n	Download File View File

Crystal structure of the BCL6 BTB domain in complex with Compound 4

Sogabe, S., Ida, K., Lane, W., Snell, G.

(2017) J Med Chem 60: 4358-4368

Released	2017-05-24
Method	X-RAY DIFFRACTION 1.94 Å
Organisms	Homo sapiens
Macromolecule	B-cell lymphoma 6 protein (protein)
Unique Ligands	7ZL, EDO

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5X4O \| pdb_00005x4o	Download File View File

Crystal structure of the BCL6 BTB domain in complex with Compound 5

Sogabe, S., Ida, K., Lane, W., Snell, G.

(2017) J Med Chem 60: 4358-4368

Released	2017-05-24
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Homo sapiens
Macromolecule	B-cell lymphoma 6 protein (protein)
Unique Ligands	YAM

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5X4P \| pdb_00005x4p	Download File View File

Crystal structure of the BCL6 BTB domain in complex with Compound 6

Sogabe, S., Ida, K., Lane, W., Snell, G.

(2017) J Med Chem 60: 4358-4368

Released	2017-05-24
Method	X-RAY DIFFRACTION 2.06 Å
Organisms	Homo sapiens
Macromolecule	B-cell lymphoma 6 protein (protein)
Unique Ligands	7ZO

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5X4Q \| pdb_00005x4q	Download File View File

Crystal structure of the BCL6 BTB domain in complex with Compound 7

Sogabe, S., Ida, K., Lane, W., Snell, G.

(2017) J Med Chem 60: 4358-4368

Released	2017-05-24
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	B-cell lymphoma 6 protein (protein)
Unique Ligands	7Z6, EDO, K

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5X54 \| pdb_00005x54	Download File View File

Crystal structure of the Keap1 Kelch domain in complex with a tetrapeptide

Sogabe, S., Kadotani, A., Lane, W., Snell, G.

(2017) Biochem Biophys Res Commun 486: 620-625

Released	2017-03-29
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia phage T7 Homo sapiens
Macromolecule	ACE-GLU-TRP-TRP-TRP (protein) Kelch-like ECH-associated protein 1 (protein)
Unique Ligands	ACT

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5X9O \| pdb_00005x9o	Download File View File

Crystal structure of the BCL6 BTB domain in complex with Compound 1a

Sogabe, S., Ida, K., Lane, W., Snell, G.

(2017) Bioorg Med Chem 25: 4876-4886

Released	2017-08-16
Method	X-RAY DIFFRACTION 1.58 Å
Organisms	Homo sapiens
Macromolecule	B-cell lymphoma 6 protein (protein)
Unique Ligands	80R, EDO, K

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5X9P \| pdb_00005x9p	Download File View File

Crystal structure of the BCL6 BTB domain in complex with Compound 5

Sogabe, S., Ida, K., Lane, W., Snell, G.

(2017) Bioorg Med Chem 25: 4876-4886

Released	2017-08-16
Method	X-RAY DIFFRACTION 1.86 Å
Organisms	Homo sapiens
Macromolecule	B-cell lymphoma 6 protein (protein)
Unique Ligands	80L

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5XKM \| pdb_00005xkm	Download File View File

Crystal structure of human phosphodiesterase 2A in complex with 6-methyl-N-(1-(4-(trifluoromethoxy)phenyl)propyl)pyrazolo[1,5-a]pyrimidine-3-carboxamide

Oki, H., Kondo, M., Snell, G., Lane, W.

(2017) J Med Chem 60: 7658-7676

Released	2017-08-16
Method	X-RAY DIFFRACTION 2.16 Å
Organisms	Homo sapiens
Macromolecule	cGMP-dependent 3',5'-cyclic phosphodiesterase (protein)
Unique Ligands	87R, MG, ZN

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5YBF \| pdb_00005ybf	Download File View File

Crystal structure of the GluA2o LBD in complex with glutamate and HBT1

Sogabe, S., Igaki, S., Hirokawa, A., Zama, Y., Lane, W., Snell, G.

(2018) J Pharmacol Exp Ther 364: 377-389

Released	2018-01-17
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Homo sapiens
Macromolecule	Glutamate receptor 2,Glutamate receptor 2 (protein)
Unique Ligands	8SR, ACT, GLU, ZN

1 to 25 of 68 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1Q35 | pdb_00001q35

1SI0 | pdb_00001si0

1SI1 | pdb_00001si1

1T64 | pdb_00001t64

1T67 | pdb_00001t67

1T69 | pdb_00001t69

1VKG | pdb_00001vkg

4PHU | pdb_00004phu

4ZYO | pdb_00004zyo

5B25 | pdb_00005b25

5H5Q | pdb_00005h5q

5H5R | pdb_00005h5r

5H5S | pdb_00005h5s

5H7G | pdb_00005h7g

5H7H | pdb_00005h7h

5X4M | pdb_00005x4m

5X4N | pdb_00005x4n

5X4O | pdb_00005x4o

5X4P | pdb_00005x4p

5X4Q | pdb_00005x4q

5X54 | pdb_00005x54

5X9O | pdb_00005x9o

5X9P | pdb_00005x9p

5XKM | pdb_00005xkm

5YBF | pdb_00005ybf