RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

234,440 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Structure Author = "Beis, K."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 52 Structures.

Refinements

Structure Determination Methodology

experimental (52)

Scientific Name of Source Organism

	Klebsiella pneumoniae (16)
	Escherichia coli (10)
	Escherichia coli K-12 (7)
	Streptococcus suis (4)
	Escherichia coli str. K-12 substr. MG1655 (3)
	Bos taurus (2)
	Rattus norvegicus (2)
	Salmonella enterica subsp. enterica serovar Typhimurium (2)
	Dermatophagoides farinae (1)
	Escherichia coli str. K-12 substr. MC4100 (1)

More...

Taxonomy

	Bacteria (45)
	Eukaryota (7)

Experimental Method

	X-RAY DIFFRACTION (45)
	ELECTRON MICROSCOPY (7)

Polymer Entity Type

Protein (52)

Refinement Resolution (Å)

	1.0 - 1.5 (4)
	1.5 - 2.0 (15)
	2.0 - 2.5 (15)
	2.5 - 3.0 (5)
	3.0 - 3.5 (10)
	3.5 - 4.0 (2)
	> 4.5 (1)

Release Date

	2000 - 2004 (6)
	2005 - 2009 (5)
	2010 - 2014 (6)
	2015 - 2019 (12)
	2020 - 2024 (22)
	2025 - 2029 (1)

Enzyme Classification Name

	Lyases (8)
	Translocases (3)
	Isomerases (4)
	Transferases (2)

Membrane Protein Annotation

	PDBTM (27)
	MemProtMD (15)
	mpstruc (15)
	OPM (9)

Symmetry Type

	Cyclic (30)
	Asymmetric (22)

SCOP Classification

	Alpha and beta proteins (a/b) (11)
	Artifacts (4)
	Membrane and cell surface proteins and peptides (3)
	Alpha and beta proteins (a+b) (4)
	Peptides (1)

AllSelected

1 to 25 of 52 Structures

Page 1 of 3

Sort by

Explore in 3D

1KEP \| pdb_00001kep	Download File View File

The crystal structure of dTDP-D-glucose 4,6-dehydratase (RmlB) from Streptococcus suis with dTDP-xylose bound

Allard, S.T.M., Beis, K., Giraud, M.-F., Hegeman, A.D., Gross, J.W., Whitfield, C., Graninger, M., Messner, P., Allen, A.G., Naismith, J.H.

(2002) Structure 10: 81-92

Released	2002-01-25
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Streptococcus suis
Macromolecule	dTDP-D-glucose 4,6-dehydratase (protein)
Unique Ligands	NAD, SO4, TDX

Explore in 3D

1KER \| pdb_00001ker	Download File View File

The crystal structure of dTDP-D-glucose 4,6-dehydratase (RmlB) from Streptococcus suis with dTDP-D-glucose bound

Allard, S.T.M., Beis, K., Giraud, M.-F., Hegeman, A.D., Gross, J.W., Whitfield, C., Graninger, M., Messner, P., Allen, A.G., Naismith, J.H.

(2002) Structure 10: 81-92

Released	2002-01-25
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Streptococcus suis
Macromolecule	dTDP-D-glucose 4,6-dehydratase (protein)
Unique Ligands	DAU, NAD, SO4

Explore in 3D

1KET \| pdb_00001ket	Download File View File

The crystal structure of dTDP-D-glucose 4,6-dehydratase (RmlB) from Streptococcus suis with thymidine diphosphate bound

Allard, S.T.M., Beis, K., Giraud, M.-F., Hegeman, A.D., Gross, J.W., Whitfield, C., Graninger, M., Messner, P., Allen, A.G., Naismith, J.H.

(2002) Structure 10: 81-92

Released	2002-01-25
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Streptococcus suis
Macromolecule	dTDP-D-glucose 4,6-dehydratase (protein)
Unique Ligands	NAD, TYD

Explore in 3D

1KEU \| pdb_00001keu	Download File View File

The crystal structure of dTDP-D-glucose 4,6-dehydratase (RmlB) from Salmonella enterica serovar Typhimurium with dTDP-D-glucose bound

Allard, S.T.M., Beis, K., Giraud, M.-F., Hegeman, A.D., Gross, J.W., Whitfield, C., Graninger, M., Messner, P., Allen, A.G., Naismith, J.H.

(2002) Structure 10: 81-92

Released	2002-01-25
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	dTDP-D-glucose 4,6-dehydratase (protein)
Unique Ligands	DAU, NAD

Explore in 3D

1KEW \| pdb_00001kew	Download File View File

The crystal structure of dTDP-D-glucose 4,6-dehydratase (RmlB) from Salmonella enterica serovar Typhimurium with thymidine diphosphate bound

Allard, S.T.M., Beis, K., Giraud, M.-F., Hegeman, A.D., Gross, J.W., Whitfield, C., Graninger, M., Messner, P., Allen, A.G., Naismith, J.H.

(2002) Structure 10: 81-92

Released	2002-01-25
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	dTDP-D-glucose 4,6-dehydratase (protein)
Unique Ligands	GOL, NAD, TYD

Explore in 3D

1OC2 \| pdb_00001oc2	Download File View File

The structure of NADH in the dTDP-D-glucose dehydratase (RmlB) enzyme

Beis, K., Naismith, J.H.

(2003) J Am Chem Soc 125: 11872

Released	2003-10-02
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Streptococcus suis
Macromolecule	DTDP-GLUCOSE 4,6-DEHYDRATASE (protein)
Unique Ligands	NAD, SO4, TDX

Explore in 3D

1V0J \| pdb_00001v0j	Download File View File

Udp-galactopyranose mutase from Mycobacterium tuberculosis

Beis, K., Naismith, J.H.

(2005) J Mol Biology 348: 971-982

Released	2005-01-26
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	UDP-GALACTOPYRANOSE MUTASE (protein)
Unique Ligands	BCN, FAD

Explore in 3D

1WAM \| pdb_00001wam	Download File View File

Structure of UDP-galactopyranose mutase from Klebsiella Pneumoniae with FADH-

Beis, K., Srikannathasan, V., Naismith, J.H.

(2005) J Mol Biology 348: 971

Released	2006-05-24
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Klebsiella pneumoniae
Macromolecule	UDP-GALACTOPYRANOSE MUTASE (protein)
Unique Ligands	FAD

Explore in 3D

2BI7 \| pdb_00002bi7	Download File View File

udp-galactopyranose mutase from Klebsiella pneumoniae oxidised FAD

Beis, K., Srikannathasan, V., Naismith, J.

(2005) J Mol Biology 348: 971

Released	2005-05-05
Method	X-RAY DIFFRACTION 2 Å
Organisms	Klebsiella pneumoniae
Macromolecule	UDP-GALACTOPYRANOSE MUTASE (protein)
Unique Ligands	FAD

Explore in 3D

2BI8 \| pdb_00002bi8	Download File View File

udp-galactopyranose mutase from Klebsiella pneumoniae with reduced FAD

Beis, K., Srikannathasan, V., Naismith, J.H.

(2005) J Mol Biology 348: 971

Released	2005-05-05
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Klebsiella pneumoniae
Macromolecule	UDP-GALACTOPYRANOSE MUTASE (protein)
Unique Ligands	FAD

Explore in 3D

2W1B \| pdb_00002w1b	Download File View File

The structure of the efflux pump AcrB in complex with bile acid

Drew, D., Klepsch, M.M., Newstead, S., Flaig, R., De Gier, J.W., Iwata, S., Beis, K.

(2008) Mol Membr Biol 25: 677

Released	2008-12-09
Method	X-RAY DIFFRACTION 3.85 Å
Organisms	Escherichia coli K-12
Macromolecule	ACRIFLAVIN RESISTANCE PROTEIN B (protein)
Unique Ligands	DXC

Explore in 3D

2X26 \| pdb_00002x26	Download File View File

Crystal structure of the periplasmic aliphatic sulphonate binding protein SsuA from Escherichia coli

Beale, J., Lee, S., Iwata, S., Beis, K.

(2010) Acta Crystallogr Sect F Struct Biol Cryst Commun 66: 391

Released	2010-04-14
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Escherichia coli K-12
Macromolecule	PERIPLASMIC ALIPHATIC SULPHONATES-BINDING PROTEIN (protein)
Unique Ligands	GOL

Explore in 3D

2XVA \| pdb_00002xva	Download File View File

Crystal structure of the tellurite detoxification protein TehB from E. coli in complex with sinefungin

Choudhury, H.G., Cameron, A.D., Iwata, S., Beis, K.

(2011) Biochem J 435: 85

Released	2011-02-16
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Escherichia coli str. K-12 substr. MG1655
Macromolecule	TELLURITE RESISTANCE PROTEIN TEHB (protein)
Unique Ligands	SFG, ZN

Explore in 3D

2XVM \| pdb_00002xvm	Download File View File

Crystal structure of the tellurite detoxification protein TehB from E. coli in complex with SAH

Choudhury, H.G., Cameron, A.D., Iwata, S., Beis, K.

(2011) Biochem J 435: 85

Released	2011-02-16
Method	X-RAY DIFFRACTION 1.48 Å
Organisms	Escherichia coli
Macromolecule	TELLURITE RESISTANCE PROTEIN TEHB (protein)
Unique Ligands	SAH

Explore in 3D

4B09 \| pdb_00004b09	Download File View File

Structure of unphosphorylated BaeR dimer

Choudhury, H., Beis, K.

(2013) Protein Sci 22: 1287

Released	2013-07-10
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Escherichia coli str. K-12 substr. MG1655
Macromolecule	TRANSCRIPTIONAL REGULATORY PROTEIN BAER (protein)
Unique Ligands	TBR

Explore in 3D

4CU4 \| pdb_00004cu4	Download File View File

FhuA from E. coli in complex with the lasso peptide microcin J25 (MccJ25)

Mathavan, I., Rebuffat, S., Beis, K.

(2014) Nat Chem Biol 10: 340

Released	2014-04-09
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli str. K-12 substr. MC4100 Escherichia coli str. K-12 substr. MG1655
Macromolecule	FERRICHROME-IRON RECEPTOR (protein) MICROCIN J25 (protein)
Unique Ligands	3PH, DAO, DPO, FTT, LDA, MYR, PO4
Unique branched monosaccharides	GCS, GMH, KDO, PA1

Explore in 3D

4PL0 \| pdb_00004pl0	Download File View File

Crystal structure of the antibacterial peptide ABC transporter McjD in an outward occluded state

Choudhury, H.G., Beis, K.

(2014) Proc Natl Acad Sci U S A 111: 9145

Released	2014-06-18
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Escherichia coli
Macromolecule	Microcin-J25 export ATP-binding/permease protein McjD (protein)
Unique Ligands	ANP, BNG, MG

Explore in 3D

4YCR \| pdb_00004ycr	Download File View File

Structure determination of an integral membrane protein at room temperature from crystals in situ

Axford, D., Hu, N.J., Foadi, J., Choudhury, H.G., Iwata, S., Beis, K., Evans, G., Alguel, Y.

(2015) Acta Crystallogr D Biol Crystallogr 71: 1228-1237

Released	2015-06-03
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Haemophilus influenzae Rd KW20
Macromolecule	Tellurite resistance protein TehA homolog (protein)
Unique Ligands	BOG

Explore in 3D

5EG1 \| pdb_00005eg1	Download File View File

Antibacterial peptide ABC transporter McjD with a resolved lipid

Choudhury, H.G., Beis, K.

(2016) J Biological Chem 291: 21656-21668

Released	2016-08-31
Method	X-RAY DIFFRACTION 3.42 Å
Organisms	Escherichia coli
Macromolecule	Microcin-J25 export ATP-binding/permease protein McjD (protein)
Unique Ligands	ANP, MG, P6L

Explore in 3D

5OFP \| pdb_00005ofp	Download File View File

Structure of the antibacterial peptide ABC transporter McjD in an apo inward occluded conformation

Beis, K., Choudhury, H.G.

(2017) EMBO J 36: 3062-3079

Released	2017-09-06
Method	X-RAY DIFFRACTION 4.71 Å
Organisms	Escherichia coli
Macromolecule	Microcin-J25 export ATP-binding/permease protein McjD (protein)

Explore in 3D

5OFR \| pdb_00005ofr	Download File View File

Structure of the antibacterial peptide ABC transporter McjD in a high energy outward occluded intermediate state

Beis, K., Bountra, K.

(2017) EMBO J 36: 3062-3079

Released	2017-09-06
Method	X-RAY DIFFRACTION 3.4 Å
Organisms	Escherichia coli
Macromolecule	Microcin-J25 export ATP-binding/permease protein McjD (protein)
Unique Ligands	ADP, MG, VO4