Ligand validation:8OTL


NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE

NAD is a Ligand Of Interest in 8OTL designated by the Author


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8OTL_NAD_F_301Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8OTL_NAD_F_301Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8OTL_NAD_F_301Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
8OTL_NAD_F_301 68% 65% 0.133 0.9430.58 0.76 - 100100%0.91
8OTL_NAD_C_301 67% 66% 0.147 0.9560.58 0.74 - 100100%0.88
8OTL_NAD_D_301 66% 65% 0.135 0.9390.6 0.75 - 100100%0.81
8OTL_NAD_A_301 54% 62% 0.167 0.9330.59 0.84 - 200100%0.74
8OTL_NAD_E_302 37% 65% 0.194 0.8930.58 0.76 - 100100%0.66
8OTL_NAD_B_301 19% 64% 0.251 0.8470.58 0.78 - 210100%0.66
2X23_NAD_A_1270 100% 24% 0.045 0.9921.42 1.68 5 900100%1
4TZK_NAD_A_500 99% 63% 0.058 0.9880.64 0.79 - 100100%0.99
4D0S_NAD_C_1270 99% 62% 0.054 0.9820.69 0.76 - 100100%1
5MTR_NAD_E_301 99% 37% 0.057 0.9841.39 1.11 3 510100%1
5MTP_NAD_A_301 98% 47% 0.062 0.9860.86 1.18 2 500100%1
3CMC_NAD_R_408 100% 20% 0.016 0.9981.63 1.74 4 900100%1
4RQU_NAD_B_403 100% 3% 0.019 0.9973.51 2.61 13 18 00100%1
3EC7_NAD_A_400 100% 18% 0.025 0.9951.8 1.74 5 810100%1
4URF_NAD_A_1249 100% 44% 0.034 0.9950.96 1.2 2 400100%1
2C5A_NAD_B_1374 100% 23% 0.039 0.9921.34 1.84 6 710100%1