Ligand validation:7NJC


6MD: N-methyladenosine

6MD is a Ligand Of Interest in 7NJC designated by the Author


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter7NJC_6MD_B_101Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter7NJC_6MD_B_101Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
7NJC_6MD_B_101 83% 4% 0.085 0.9432.34 3.24 3 1000100%1
4RDN_6MD_A_601 79% 23% 0.103 0.9480.95 2.19 1 300100%1
6ZDA_6MD_B_601 74% 13% 0.094 0.9221.39 2.51 2 200100%1
6ZD7_6MD_B_606 71% 16% 0.095 0.9141.37 2.27 2 410100%1
6ZD5_6MD_A_606 65% 18% 0.143 0.9461.26 2.21 2 300100%1
4LMP_6MD_A_401 46% 3% 0.158 0.8941.98 3.91 1 700100%1