Ligand validation:6DJ5


GOL: GLYCEROL



Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter6DJ5_GOL_A_104Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter6DJ5_GOL_A_104Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter6DJ5_GOL_A_104Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
6DJ5_GOL_A_104 20% 89% 0.239 0.840.27 0.37 - -20100%0.5
6DJ5_GOL_B_208 9% 88% 0.243 0.7350.33 0.34 - -10100%0.5
6DJ5_GOL_B_207 9% 92% 0.357 0.8510.33 0.18 - -10100%0.5
6DJ5_GOL_A_103 4% 91% 0.438 0.8350.35 0.23 - -10100%0.5
3A2O_GOL_B_803 97% 26% 0.069 0.9851.89 1.13 1 -00100%0.63
3CYX_GOL_A_801 88% 39% 0.089 0.9630.9 1.47 - 100100%1
3FX5_GOL_B_902 82% 18% 0.109 0.9651.84 1.67 1 100100%0.59
2AOG_GOL_A_701 82% 54% 0.122 0.9780.89 0.89 - -00100%0.43
3NU3_GOL_B_802 80% 55% 0.108 0.9560.4 1.31 - 120100%0.3
2YOQ_GOL_A_1196 100% 35% 0.024 0.9960.38 2.12 - 200100%1
4KFD_GOL_D_806 100% 57% 0.024 0.9950.41 1.21 - -00100%1
4KFE_GOL_E_803 100% 63% 0.024 0.9950.31 1.07 - -00100%1
1M5Q_GOL_W_4006 100% 0% 0.027 0.9924.89 6.2 5 300100%1
2Y3G_GOL_A_1150 100% 85% 0.029 0.9950.36 0.39 - -00100%1