Ligand validation:5O42


BGC: beta-D-glucopyranose

BGC is a Ligand Of Interest in 5O42 designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5O42_BGC_A_303Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5O42_BGC_A_303Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5O42_BGC_A_303Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5O42_BGC_A_303 31% 91% 0.161 0.830.19 0.39 - -00100%0.63
5O6X_BGC_A_303 90% 91% 0.073 0.9550.19 0.38 - -00100%1
5O6Z_BGC_A_303 68% 90% 0.098 0.9080.16 0.44 - -00100%0.76
6G4L_BGC_A_303 58% 85% 0.1 0.8770.2 0.54 - -00100%0.8
6QCK_BGC_A_405 51% 91% 0.125 0.8790.18 0.38 - -00100%0.89
5O6O_BGC_A_303 50% 91% 0.113 0.8610.21 0.34 - -00100%0.72
5DVI_BGC_B_501 100% 57% 0.027 0.9910.74 0.9 - -00100%1
1HHU_BGC_C_8 100% 67% 0.037 0.9970.6 0.68 - -00100%0.9167
9G11_BGC_A_601 100% 46% 0.037 0.9951.24 0.84 1 -10100%1
4IIG_BGC_B_950 100% 50% 0.035 0.9870.78 1.13 - 210100%1
2V3G_BGC_A_1281 100% 68% 0.051 0.9940.52 0.69 - -00100%1