Ligand validation:2GBC

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 2GBC designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
2GBC_NAG_A_1521	25%	56%	0.163	0.794	0.7	1	-	1	0	0	100%	0.9333
2GBC_NAG_A_1319	23%	45%	0.131	0.752	0.66	1.46	-	1	0	0	100%	0.9333
2GBC_NAG_A_1227	22%	57%	0.139	0.755	0.65	1.01	-	1	3	1	100%	0.9333
2GBC_NAG_B_1319	21%	37%	0.152	0.757	0.75	1.69	1	3	0	0	100%	0.9333
2GBC_NAG_B_1521	5%	66%	0.181	0.597	0.55	0.77	-	-	0	0	100%	0.9333
2GBC_NAG_B_1227	5%	56%	0.192	0.594	0.64	1.04	-	1	2	1	100%	0.9333
2GBC_NAG_B_1090	3%	58%	0.191	0.514	0.87	0.75	1	-	0	0	100%	0.9333
2GBC_NAG_A_1083	2%	60%	0.221	0.463	0.79	0.75	-	-	0	0	100%	0.9333
2GBC_NAG_A_1090	1%	34%	0.201	0.375	1.35	1.28	2	2	0	1	100%	0.9333
2GBC_NAG_B_1083	1%	50%	0.234	0.375	1.17	0.79	1	-	0	1	100%	0.9333
5VTA_NAG_C_804	100%	51%	0.027	0.99	0.33	1.53	-	3	0	0	100%	0.9333
3H0C_NAG_A_794	100%	56%	0.021	0.995	0.61	1.08	-	1	0	0	100%	0.9333
5F9W_NAG_A_510	100%	88%	0.023	0.994	0.24	0.43	-	-	0	0	100%	0.9333
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	0	100%	0.9333
5O5D_NAG_A_601	100%	65%	0.022	0.994	0.32	0.99	-	1	0	0	100%	0.9333
6MUG_NAG_G_629	100%	76%	0.022	0.994	0.35	0.58	-	-	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.