THM: THYMIDINE

THM is a Ligand Of Interest in 1P6X designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter1P6X_THM_B_702Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter1P6X_THM_B_702Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter1P6X_THM_B_702Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
1P6X_THM_B_702 91% 15% 0.079 0.9641.29 2.41 3 600100%1
1P6X_THM_A_701 88% 15% 0.088 0.9631.6 2.14 6 500100%1
1P72_THM_B_702 79% 18% 0.103 0.9471.4 2.11 5 700100%1
4HO4_THM_B_302 97% 9% 0.068 0.9861.51 2.97 4 1000100%1
4HO2_THM_A_301 96% 14% 0.066 0.9731.65 2.16 3 600100%1
4LZW_THM_A_301 95% 9% 0.065 0.9682.36 2.1 8 610100%1
1KIM_THM_B_2 95% 24% 0.07 0.9721.62 1.47 4 310100%1
2QQ0_THM_A_501 94% 21% 0.071 0.971.55 1.75 3 500100%1