3DK5
Crystal Structure of Apo-GlmU from Mycobacterium tuberculosis
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3dk5a2 | All beta proteins | Single-stranded left-handed beta-helix | Trimeric LpxA-like enzymes | automated matches | automated matches | (Mycobacterium tuberculosis H37Ra ) [TaxId: 419947 ], | SCOPe (2.08) |
A | d3dk5a1 | Alpha and beta proteins (a/b) | Nucleotide-diphospho-sugar transferases | Nucleotide-diphospho-sugar transferases | automated matches | automated matches | (Mycobacterium tuberculosis H37Ra ) [TaxId: 419947 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Hexapep_2_1 | e3dk5A4 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Trimeric LpxA-like enzymes (From Topology) | T: Trimeric LpxA-like enzymes | F: Hexapep_2_1 | ECOD (1.6) |
A | NTP_transferase_1 | e3dk5A3 | A: a/b three-layered sandwiches | X: Nucleotide-diphospho-sugar transferases (From Topology) | H: Nucleotide-diphospho-sugar transferases (From Topology) | T: Nucleotide-diphospho-sugar transferases | F: NTP_transferase_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.90.550.10 | Alpha Beta | Alpha-Beta Complex | Spore Coat Polysaccharide Biosynthesis Protein SpsA | Chain A | CATH (4.3.0) |
A | 2.160.10.10 | Mainly Beta | 3 Solenoid | UDP N-Acetylglucosamine Acyltransferase | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00132 | Bacterial transferase hexapeptide (six repeats) (Hexapep) | Bacterial transferase hexapeptide (six repeats) | - | Repeat | |
PF12804 | MobA-like NTP transferase domain (NTP_transf_3) | MobA-like NTP transferase domain | This family includes the MobA protein (Molybdopterin-guanine dinucleotide biosynthesis protein A). The family also includes a wide range of other NTP transferase domain. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR050065 | Bifunctional protein GlmU-like | Family | |
IPR025877 | MobA-like NTP transferase | Domain | |
IPR038009 | GlmU, C-terminal LbH domain | Domain | |
IPR005882 | Bifunctional protein GlmU | Family | |
IPR001451 | Hexapeptide repeat | Repeat | |
IPR011004 | Trimeric LpxA-like superfamily | Homologous Superfamily | |
IPR029044 | Nucleotide-diphospho-sugar transferases | Homologous Superfamily |