Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
G [auth I]d2ba0i1 Alpha and beta proteins (a+b) Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribonuclease PH domain 1-like Exosome complex exonuclease 2,ECX2 (Archaeoglobus fulgidus ) [TaxId: 2234 ], SCOPe (2.08)
G [auth I]d2ba0i2 Alpha and beta proteins (a+b) Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like Exosome complex exonuclease 2, ECX2 (Archaeoglobus fulgidus ) [TaxId: 2234 ], SCOPe (2.08)
Hd2ba0h1 Alpha and beta proteins (a+b) Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribonuclease PH domain 1-like Exosome complex exonuclease 2,ECX2 (Archaeoglobus fulgidus ) [TaxId: 2234 ], SCOPe (2.08)
Hd2ba0h2 Alpha and beta proteins (a+b) Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like Exosome complex exonuclease 2, ECX2 (Archaeoglobus fulgidus ) [TaxId: 2234 ], SCOPe (2.08)
I [auth G]d2ba0g1 Alpha and beta proteins (a+b) Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribonuclease PH domain 1-like Exosome complex exonuclease 2,ECX2 (Archaeoglobus fulgidus ) [TaxId: 2234 ], SCOPe (2.08)
I [auth G]d2ba0g2 Alpha and beta proteins (a+b) Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like Exosome complex exonuclease 2, ECX2 (Archaeoglobus fulgidus ) [TaxId: 2234 ], SCOPe (2.08)
Ad2ba0a1 All beta proteins OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like S1-domain of exosome complex RNA-binding protein 1, ECR1 (Archaeoglobus fulgidus ) [TaxId: 2234 ], SCOPe (2.08)
Ad2ba0a2 All beta proteins Barrel-sandwich hybrid Ribosomal L27 protein-like ECR1 N-terminal domain-like Exosome complex RNA-binding protein 1, ECR1 (Archaeoglobus fulgidus ) [TaxId: 2234 ], SCOPe (2.08)
Ad2ba0a3 Alpha and beta proteins (a+b) Eukaryotic type KH-domain (KH-domain type I) Eukaryotic type KH-domain (KH-domain type I) Eukaryotic type KH-domain (KH-domain type I) Exosome complex RNA-binding protein 1, ECR1 (Archaeoglobus fulgidus ) [TaxId: 2234 ], SCOPe (2.08)
Bd2ba0b1 All beta proteins OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like S1-domain of exosome complex RNA-binding protein 1, ECR1 (Archaeoglobus fulgidus ) [TaxId: 2234 ], SCOPe (2.08)
Bd2ba0b2 All beta proteins Barrel-sandwich hybrid Ribosomal L27 protein-like ECR1 N-terminal domain-like Exosome complex RNA-binding protein 1, ECR1 (Archaeoglobus fulgidus ) [TaxId: 2234 ], SCOPe (2.08)
Bd2ba0b3 Alpha and beta proteins (a+b) Eukaryotic type KH-domain (KH-domain type I) Eukaryotic type KH-domain (KH-domain type I) Eukaryotic type KH-domain (KH-domain type I) Exosome complex RNA-binding protein 1, ECR1 (Archaeoglobus fulgidus ) [TaxId: 2234 ], SCOPe (2.08)
Cd2ba0c1 All beta proteins OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like S1-domain of exosome complex RNA-binding protein 1, ECR1 (Archaeoglobus fulgidus ) [TaxId: 2234 ], SCOPe (2.08)
Cd2ba0c2 All beta proteins Barrel-sandwich hybrid Ribosomal L27 protein-like ECR1 N-terminal domain-like Exosome complex RNA-binding protein 1, ECR1 (Archaeoglobus fulgidus ) [TaxId: 2234 ], SCOPe (2.08)
Cd2ba0c3 Alpha and beta proteins (a+b) Eukaryotic type KH-domain (KH-domain type I) Eukaryotic type KH-domain (KH-domain type I) Eukaryotic type KH-domain (KH-domain type I) Exosome complex RNA-binding protein 1, ECR1 (Archaeoglobus fulgidus ) [TaxId: 2234 ], SCOPe (2.08)
D [auth F]d2ba0f1 Alpha and beta proteins (a+b) Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribonuclease PH domain 1-like Exosome complex exonuclease 1, ECX1 (Archaeoglobus fulgidus ) [TaxId: 2234 ], SCOPe (2.08)
D [auth F]d2ba0f2 Alpha and beta proteins (a+b) Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like Exosome complex exonuclease 1, ECX1 (Archaeoglobus fulgidus ) [TaxId: 2234 ], SCOPe (2.08)
Ed2ba0e1 Alpha and beta proteins (a+b) Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribonuclease PH domain 1-like Exosome complex exonuclease 1, ECX1 (Archaeoglobus fulgidus ) [TaxId: 2234 ], SCOPe (2.08)
Ed2ba0e2 Alpha and beta proteins (a+b) Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like Exosome complex exonuclease 1, ECX1 (Archaeoglobus fulgidus ) [TaxId: 2234 ], SCOPe (2.08)
F [auth D]d2ba0d1 Alpha and beta proteins (a+b) Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribonuclease PH domain 1-like Exosome complex exonuclease 1, ECX1 (Archaeoglobus fulgidus ) [TaxId: 2234 ], SCOPe (2.08)
F [auth D]d2ba0d2 Alpha and beta proteins (a+b) Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like Exosome complex exonuclease 1, ECX1 (Archaeoglobus fulgidus ) [TaxId: 2234 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
G [auth I]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8033526 3000100 SCOP2B (2022-06-29)
G [auth I]SCOP2B SuperfamilyRibonuclease PH domain 2-like 8033527 3000346 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyRibonuclease PH domain 2-like 8033527 3000346 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8033526 3000100 SCOP2B (2022-06-29)
I [auth G]SCOP2 FamilyRibonuclease PH domain 1-like 8021146 4000958 SCOP2 (2022-06-29)
I [auth G]SCOP2 FamilyRibonuclease PH domain 2-like 8021147 4001767 SCOP2 (2022-06-29)
I [auth G]SCOP2 SuperfamilyRibosomal protein S5 domain 2-like 8033526 3000100 SCOP2 (2022-06-29)
I [auth G]SCOP2 SuperfamilyRibonuclease PH domain 2-like 8033527 3000346 SCOP2 (2022-06-29)
ASCOP2 FamilyCold shock DNA-binding domain-like 8021140 4001909 SCOP2 (2022-06-29)
ASCOP2 FamilyECR1 N-terminal domain-like 8021142 4001938 SCOP2 (2022-06-29)
ASCOP2 FamilyEukaryotic type KH-domain (KH-domain type I) 8021144 4001190 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyNucleic acid-binding proteins 8033520 3000135 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyRibosomal L27 protein-like 8033522 3000539 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyEukaryotic type KH-domain (KH-domain type I) 8033524 3001023 SCOP2 (2022-06-29)
BSCOP2B SuperfamilyRibosomal L27 protein-like 8033522 3000539 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyEukaryotic type KH-domain (KH-domain type I) 8033524 3001023 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyNucleic acid-binding proteins 8033520 3000135 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyNucleic acid-binding proteins 8033520 3000135 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyRibosomal L27 protein-like 8033522 3000539 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyEukaryotic type KH-domain (KH-domain type I) 8033524 3001023 SCOP2B (2022-06-29)
D [auth F]SCOP2B SuperfamilyRibonuclease PH domain 2-like 8033521 3000346 SCOP2B (2022-06-29)
D [auth F]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8033518 3000100 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8033518 3000100 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyRibonuclease PH domain 2-like 8033521 3000346 SCOP2B (2022-06-29)
F [auth D]SCOP2 FamilyRibonuclease PH domain 1-like 8021138 4000958 SCOP2 (2022-06-29)
F [auth D]SCOP2 FamilyRibonuclease PH domain 2-like 8021141 4001767 SCOP2 (2022-06-29)
F [auth D]SCOP2 SuperfamilyRibosomal protein S5 domain 2-like 8033518 3000100 SCOP2 (2022-06-29)
F [auth D]SCOP2 SuperfamilyRibonuclease PH domain 2-like 8033521 3000346 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
G [auth I]RNase_PH_2e2ba0I4 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: RNase_PH_2ECOD (1.6)
G [auth I]RNase_PH_C_1e2ba0I3 A: a+b two layersX: Ribonuclease PH domain 2-likeH: Ribonuclease PH domain 2 (From Topology)T: Ribonuclease PH domain 2F: RNase_PH_C_1ECOD (1.6)
HRNase_PH_2e2ba0H2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: RNase_PH_2ECOD (1.6)
HRNase_PH_C_1e2ba0H1 A: a+b two layersX: Ribonuclease PH domain 2-likeH: Ribonuclease PH domain 2 (From Topology)T: Ribonuclease PH domain 2F: RNase_PH_C_1ECOD (1.6)
I [auth G]RNase_PH_2e2ba0G2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: RNase_PH_2ECOD (1.6)
I [auth G]RNase_PH_C_1e2ba0G1 A: a+b two layersX: Ribonuclease PH domain 2-likeH: Ribonuclease PH domain 2 (From Topology)T: Ribonuclease PH domain 2F: RNase_PH_C_1ECOD (1.6)
AS1_5e2ba0A1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: S1_5ECOD (1.6)
AKH_6_2e2ba0A2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Eukaryotic type KH-domain (KH-domain type I)F: KH_6_2ECOD (1.6)
AECR1_N_2e2ba0A3 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: ECR1_N_2ECOD (1.6)
BS1_5e2ba0B1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: S1_5ECOD (1.6)
BKH_6_2e2ba0B2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Eukaryotic type KH-domain (KH-domain type I)F: KH_6_2ECOD (1.6)
BECR1_N_2e2ba0B3 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: ECR1_N_2ECOD (1.6)
CS1_5e2ba0C1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: S1_5ECOD (1.6)
CKH_6_2e2ba0C2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Eukaryotic type KH-domain (KH-domain type I)F: KH_6_2ECOD (1.6)
CECR1_N_2e2ba0C3 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: ECR1_N_2ECOD (1.6)
D [auth F]RNase_PHe2ba0F2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: RNase_PHECOD (1.6)
D [auth F]RNase_PH_C_3e2ba0F1 A: a+b two layersX: Ribonuclease PH domain 2-likeH: Ribonuclease PH domain 2 (From Topology)T: Ribonuclease PH domain 2F: RNase_PH_C_3ECOD (1.6)
ERNase_PHe2ba0E2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: RNase_PHECOD (1.6)
ERNase_PH_C_3e2ba0E1 A: a+b two layersX: Ribonuclease PH domain 2-likeH: Ribonuclease PH domain 2 (From Topology)T: Ribonuclease PH domain 2F: RNase_PH_C_3ECOD (1.6)
F [auth D]RNase_PHe2ba0D2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: RNase_PHECOD (1.6)
F [auth D]RNase_PH_C_3e2ba0D1 A: a+b two layersX: Ribonuclease PH domain 2-likeH: Ribonuclease PH domain 2 (From Topology)T: Ribonuclease PH domain 2F: RNase_PH_C_3ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
G [auth I]3.30.230.70 Alpha Beta 2-Layer Sandwich Ribosomal Protein S5 domain 2CATH (4.3.0)
H3.30.230.70 Alpha Beta 2-Layer Sandwich Ribosomal Protein S5 domain 2CATH (4.3.0)
I [auth G]3.30.230.70 Alpha Beta 2-Layer Sandwich Ribosomal Protein S5 domain 2CATH (4.3.0)
A2.40.50.100 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domainCATH (4.3.0)
A2.40.50.140 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Nucleic acid-binding proteinsCATH (4.3.0)
A3.30.1370.10 Alpha Beta 2-Layer Sandwich Ribosomal Protein S8 Chain: A, domain 1CATH (4.3.0)
B2.40.50.100 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domainCATH (4.3.0)
B2.40.50.140 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Nucleic acid-binding proteinsCATH (4.3.0)
B3.30.1370.10 Alpha Beta 2-Layer Sandwich Ribosomal Protein S8 Chain: A, domain 1CATH (4.3.0)
C2.40.50.100 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domainCATH (4.3.0)
C2.40.50.140 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Nucleic acid-binding proteinsCATH (4.3.0)
C3.30.1370.10 Alpha Beta 2-Layer Sandwich Ribosomal Protein S8 Chain: A, domain 1CATH (4.3.0)
D [auth F]3.30.230.70 Alpha Beta 2-Layer Sandwich Ribosomal Protein S5 domain 2CATH (4.3.0)
E3.30.230.70 Alpha Beta 2-Layer Sandwich Ribosomal Protein S5 domain 2CATH (4.3.0)
F [auth D]3.30.230.70 Alpha Beta 2-Layer Sandwich Ribosomal Protein S5 domain 2CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
G [auth I],
H,
I [auth G]
PF037253' exoribonuclease family, domain 2 (RNase_PH_C)3' exoribonuclease family, domain 2This family includes 3'-5' exoribonucleases. Ribonuclease PH contains a single copy of this domain, and removes nucleotide residues following the -CCA terminus of tRNA. Polyribonucleotide nucleotidyltransferase (PNPase) contains two tandem copies of ...This family includes 3'-5' exoribonucleases. Ribonuclease PH contains a single copy of this domain, and removes nucleotide residues following the -CCA terminus of tRNA. Polyribonucleotide nucleotidyltransferase (PNPase) contains two tandem copies of the domain. PNPase is involved in mRNA degradation in a 3'-5' direction. The exosome is a 3'-5' exoribonuclease complex that is required for 3' processing of the 5.8S rRNA. Three of its five protein components, Swiss:P46948 Swiss:Q12277 and Swiss:P25359 contain a copy of this domain [1]. Swiss:Q10205, a hypothetical protein from S. pombe appears to belong to an uncharacterised subfamily. This subfamily is found in both eukaryotes and archaebacteria.
Domain
G [auth I],
H,
I [auth G]
PF011383' exoribonuclease family, domain 1 (RNase_PH)3' exoribonuclease family, domain 1This family includes 3'-5' exoribonucleases. Ribonuclease PH contains a single copy of this domain, and removes nucleotide residues following the -CCA terminus of tRNA. Polyribonucleotide nucleotidyltransferase (PNPase) contains two tandem copies of ...This family includes 3'-5' exoribonucleases. Ribonuclease PH contains a single copy of this domain, and removes nucleotide residues following the -CCA terminus of tRNA. Polyribonucleotide nucleotidyltransferase (PNPase) contains two tandem copies of the domain. PNPase is involved in mRNA degradation in a 3'-5' direction. The exosome is a 3'-5' exoribonuclease complex that is required for 3' processing of the 5.8S rRNA. Three of its five protein components, Swiss:P46948 Swiss:Q12277 and Swiss:P25359 contain a copy of this domain [1]. Swiss:Q10205, a hypothetical protein from S. pombe appears to belong to an uncharacterised subfamily. This subfamily is found in both eukaryotes and archaebacteria.
Domain
A, B, C
PF21266RRP4, S1 domain (RRP4_S1)RRP4, S1 domainExosome complex component RRP4 is a non-catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. It consists of a N-terminal beta-sandw ...Exosome complex component RRP4 is a non-catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. It consists of a N-terminal beta-sandwich hybrid domain (Pfam:PF14382), a central S1 domain and a C-terminal KH domain (Pfam:PF15985). This entry represents the S1 RNA binding domain, which has an OB fold [1,2].
Domain
A, B, C
PF00013KH domain (KH_1)KH domainKH motifs bind RNA in vitro. Autoantibodies to Nova, a KH domain protein, cause paraneoplastic opsoclonus ataxia.Domain
A, B, C
PF22625Exosome RNA binding protein RRP4 N-terminal domain (ECR1_N_2)Exosome RNA binding protein RRP4 N-terminal domainThis domain is found N-terminal in exosome RNA binding protein RRP4 and related proteins [1-5]. RRP4 is a part of the exosome regulatory substrate recognition platform. This domain is structurally similar to ribosomal L27 protein.Domain
D [auth F],
E,
F [auth D]
PF037253' exoribonuclease family, domain 2 (RNase_PH_C)3' exoribonuclease family, domain 2This family includes 3'-5' exoribonucleases. Ribonuclease PH contains a single copy of this domain, and removes nucleotide residues following the -CCA terminus of tRNA. Polyribonucleotide nucleotidyltransferase (PNPase) contains two tandem copies of ...This family includes 3'-5' exoribonucleases. Ribonuclease PH contains a single copy of this domain, and removes nucleotide residues following the -CCA terminus of tRNA. Polyribonucleotide nucleotidyltransferase (PNPase) contains two tandem copies of the domain. PNPase is involved in mRNA degradation in a 3'-5' direction. The exosome is a 3'-5' exoribonuclease complex that is required for 3' processing of the 5.8S rRNA. Three of its five protein components, Swiss:P46948 Swiss:Q12277 and Swiss:P25359 contain a copy of this domain [1]. Swiss:Q10205, a hypothetical protein from S. pombe appears to belong to an uncharacterised subfamily. This subfamily is found in both eukaryotes and archaebacteria.
Domain
D [auth F],
E,
F [auth D]
PF011383' exoribonuclease family, domain 1 (RNase_PH)3' exoribonuclease family, domain 1This family includes 3'-5' exoribonucleases. Ribonuclease PH contains a single copy of this domain, and removes nucleotide residues following the -CCA terminus of tRNA. Polyribonucleotide nucleotidyltransferase (PNPase) contains two tandem copies of ...This family includes 3'-5' exoribonucleases. Ribonuclease PH contains a single copy of this domain, and removes nucleotide residues following the -CCA terminus of tRNA. Polyribonucleotide nucleotidyltransferase (PNPase) contains two tandem copies of the domain. PNPase is involved in mRNA degradation in a 3'-5' direction. The exosome is a 3'-5' exoribonuclease complex that is required for 3' processing of the 5.8S rRNA. Three of its five protein components, Swiss:P46948 Swiss:Q12277 and Swiss:P25359 contain a copy of this domain [1]. Swiss:Q10205, a hypothetical protein from S. pombe appears to belong to an uncharacterised subfamily. This subfamily is found in both eukaryotes and archaebacteria.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
G [auth I],
H,
I [auth G]
Archaeal exosome RNA binding protein RRP42-
A, B, C
Archaeal exosome RNA binding protein RRP4
D [auth F],
E,
F [auth D]
Archaeal exosome RNA binding protein RRP41

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
G [auth I],
H,
I [auth G]
IPR027408PNPase/RNase PH domain superfamilyHomologous Superfamily
G [auth I],
H,
I [auth G]
IPR001247Exoribonuclease, phosphorolytic domain 1Domain
G [auth I],
H,
I [auth G]
IPR050590Exosome complex component Rrp42 subfamilyFamily
G [auth I],
H,
I [auth G]
IPR036345Exoribonuclease, PH domain 2 superfamilyHomologous Superfamily
G [auth I],
H,
I [auth G]
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
G [auth I],
H,
I [auth G]
IPR015847Exoribonuclease, phosphorolytic domain 2Domain
G [auth I],
H,
I [auth G]
IPR020869Exosome complex component Rrp42, archaeaFamily
A, B, C
IPR054371Exosome RNA binding protein RRP4, N-terminal domainDomain
A, B, C
IPR003029S1 domainDomain
A, B, C
IPR023474Exosome complex component Rrp4Family
A, B, C
IPR004087K Homology domainDomain
A, B, C
IPR048565RRP4, S1 domainDomain
A, B, C
IPR036612K Homology domain, type 1 superfamilyHomologous Superfamily
A, B, C
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
A, B, C
IPR026699Exosome complex RNA-binding protein 1/RRP40/RRP4Family
A, B, C
IPR004088K Homology domain, type 1Domain
D [auth F],
E,
F [auth D]
IPR011807Exosome complex component Rrp41Family
D [auth F],
E,
F [auth D]
IPR027408PNPase/RNase PH domain superfamilyHomologous Superfamily
D [auth F],
E,
F [auth D]
IPR001247Exoribonuclease, phosphorolytic domain 1Domain
D [auth F],
E,
F [auth D]
IPR036345Exoribonuclease, PH domain 2 superfamilyHomologous Superfamily
D [auth F],
E,
F [auth D]
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
D [auth F],
E,
F [auth D]
IPR015847Exoribonuclease, phosphorolytic domain 2Domain
D [auth F],
E,
F [auth D]
IPR050080Ribonuclease PHFamily