Download MendeleyCrystal Structure of Dihydrofolate Reductase from Yersinia pestis
Maltseva, N., Kim, Y., Makowska-Grzyska, M., Mulligan, R., Papazisi, L., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)To be published.
3Q1H | pdb_00003q1h
Crystal Structure of Dihydrofolate Reductase from Yersinia pestis
- PDB DOI: https://doi.org/10.2210/pdb3Q1H/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Yersinia pestis CO92
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2010-12-17 Released: 2011-01-12
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.80 Å
- R-Value Free: 0.200 (Depositor), 0.190 (DCC)
- R-Value Work: 0.166 (Depositor), 0.160 (DCC)
- R-Value Observed: 0.167 (Depositor)
Starting Model: experimental
View more details
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Dihydrofolate reductase | 163 | Yersinia pestis CO92 | Mutation(s): 0 Gene Names: folA, y3688, YPO0486, YP_3693 EC: 1.5.1.3 |  | |
UniProt | |||||
Find proteins for A0A3N4BLI0 (Yersinia pestis) Explore A0A3N4BLI0 Go to UniProtKB: A0A3N4BLI0 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A3N4BLI0 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| SO4 Query on SO4 | B [auth A], C [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.80 Å
- R-Value Free: 0.200 (Depositor), 0.190 (DCC)
- R-Value Work: 0.166 (Depositor), 0.160 (DCC)
- R-Value Observed: 0.167 (Depositor)
Diffraction Data: https://doi.org/10.18430/m33q1h
Space Group: C 2 2 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 60.477 | α = 90 |
| b = 79.152 | β = 90 |
| c = 64.685 | γ = 90 |
| Software Name | Purpose |
|---|---|
| SBC-Collect | data collection |
| HKL-3000 | data collection |
| BALBES | phasing |
| PHENIX | refinement |
| HKL-3000 | data reduction |
| HKL-3000 | data scaling |
Entry History
Deposition Data
- Released Date: 2011-01-12 Deposition Author(s): Maltseva, N., Kim, Y., Makowska-Grzyska, M., Mulligan, R., Papazisi, L., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
Revision History (Full details and data files)
- Version 1.0: 2011-01-12
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2023-09-13
Changes: Data collection, Database references, Derived calculations, Refinement description
