Download MendeleyBiocatalytic Cleavage of Para-Acetoxy Benzyl Ethers: Application to Protecting Group Chemistry
Ashley, B., Demingo, C., Rozeboom, H.J., Bianciardi, N., Fraaije, M.W.To be published.
9GJ0
Eugenol Oxidase (EUGO)from Rhodococcus jostii RHA1, mutant B1
- PDB DOI: https://doi.org/10.2210/pdb9GJ0/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Rhodococcus jostii RHA1
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2024-08-20 Released: 2024-12-18
- Funding Organization(s): Not funded
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.76 Å
- R-Value Free: 0.266
- R-Value Work: 0.206
- R-Value Observed: 0.209
Starting Model: experimental
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This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Probable vanillyl-alcohol oxidase | 552 | Rhodococcus jostii RHA1 | Mutation(s): 11 Gene Names: RHA1_ro03282 EC: 1.1.3.38 |  | |
UniProt | |||||
Find proteins for Q0SBK1 (Rhodococcus jostii (strain RHA1)) Explore Q0SBK1 Go to UniProtKB: Q0SBK1 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q0SBK1 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| FAD Query on FAD | D [auth A], E [auth B] | FLAVIN-ADENINE DINUCLEOTIDE C27 H33 N9 O15 P2 VWWQXMAJTJZDQX-UYBVJOGSSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.76 Å
- R-Value Free: 0.266
- R-Value Work: 0.206
- R-Value Observed: 0.209
- Space Group: P 32 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 109.77 | α = 90 |
| b = 109.77 | β = 90 |
| c = 244.985 | γ = 120 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| Aimless | data scaling |
| XDS | data reduction |
| PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2024-12-18 Deposition Author(s): Rozeboom, H.J., Fraaije, M.W.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Not funded | -- |
Revision History (Full details and data files)
- Version 1.0: 2024-12-18
Type: Initial release
