6SM7

Crystal structure of SLA Reductase YihU from E. Coli

PDB DOI: https://doi.org/10.2210/pdb6SM7/pdb

Classification: OXIDOREDUCTASE
Organism(s): Escherichia coli
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2019-08-21 Released: 2020-08-12
Deposition Author(s): Sharma, M., Davies, G.J.
Funding Organization(s): Leverhulme Trust

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.88 Å
R-Value Free: 0.216
R-Value Work: 0.180
R-Value Observed: 0.182

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Dynamic Structural Changes Accompany the Production of Dihydroxypropanesulfonate by Sulfolactaldehyde Reductase

Sharma, M., Abayakoon, P., Lingford, J.P., Epa, R., John, A., Jin, Y., Goddard-Borger, E.D., Davies, G.J., Williams, S.J.

(2020) ACS Catal

DOI: https://doi.org/10.1021/acscatal.9b04427

Macromolecule Content

Total Structure Weight: 129.28 kDa
Atom Count: 9,141
Modelled Residue Count: 1,179
Deposited Residue Count: 1,224
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
3-sulfolactaldehyde reductase	A, B, C [auth D], D [auth C]	306	Escherichia coli	Mutation(s): 0 Gene Names: yihU, garR_1, garR_2, garR_3, mmsB, A8C65_00150, AML07_00060, APZ14_22310, AUQ13_20575, AUS26_20040... yihU, garR_1, garR_2, garR_3, mmsB, A8C65_00150, AML07_00060, APZ14_22310, AUQ13_20575, AUS26_20040, AW106_21710, BANRA_02548, BANRA_03067, BET08_12475, BHS81_23180, BUE81_09905, BvCms12BK_03464, BvCms2454_03851, BvCmsA75A_01696, BvCmsH15A_04687, BvCmsKSP039_00778, BvCmsNSNP006_03738, BvCmsNSNP036_00183, BvCmsOUP014_01268, BvCmsSINP012_03704, BvCmsSINP036_03005, BvCmsSIP019_01210, BvCmsSIP044_01085, C2U48_13500, C4J69_10130, C5N07_19050, C5P01_22840, CA593_06580, COD30_17900, CV83915_02180, D0X26_17330, D3821_15280, D9I97_17995, D9J11_11940, DIV22_13840, DL800_27080, DNQ41_00720, E2855_04886, E2863_04195, E4Z89_22515, EAI42_02715, EAI52_23825, EC1094V2_4430, EC3234A_72c00280, EC3426_00187, EC95NR1_03333, ED600_18125, EEP23_19010, EKI52_16085, EL75_4302, EL79_4554, EL80_4461, EPS71_08590, EPS97_11270, ERS150876_03348, EXX32_12725, EYD11_22365, FORC28_5901, NCTC10090_02897, NCTC10865_06042, NCTC13462_03726, NCTC8500_05456, NCTC8960_02460, NCTC9037_04932, NCTC9045_05673, NCTC9058_02032, NCTC9062_03294, NCTC9706_02118, RK56_017955, SAMEA3484427_03349, SAMEA3484429_03464, SAMEA3752557_02792, SAMEA3752559_05062, SAMEA3753300_04042, WQ89_24850 EC: 1.1.1.373 (PDB Primary Data), 1.1.1.61 (UniProt)
UniProt
Find proteins for P0A9V8 (Escherichia coli (strain K12)) Explore P0A9V8 Go to UniProtKB: P0A9V8
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P0A9V8
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
BO3 Query on BO3 Download Ideal Coordinates CCD File SDF format, chain E [auth A] SDF format, chain F [auth B] SDF format, chain G [auth D] SDF format, chain H [auth C] MOL2 format, chain E [auth A] MOL2 format, chain F [auth B] MOL2 format, chain G [auth D] MOL2 format, chain H [auth C] mmCIF format, chain E [auth A] mmCIF format, chain F [auth B] mmCIF format, chain G [auth D] mmCIF format, chain H [auth C]	E [auth A], F [auth B], G [auth D], H [auth C]	BORIC ACID B H₃ O₃ KGBXLFKZBHKPEV-UHFFFAOYSA-N		Interactions Focus chain E [auth A] Focus chain F [auth B] Focus chain G [auth D] Focus chain H [auth C] Interactions & Density Focus chain E [auth A] Focus chain F [auth B] Focus chain G [auth D] Focus chain H [auth C]