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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Space Group = "P 63"

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Search Summary

This query matches 1,453 Structures.

Refinements

Structure Determination Methodology

experimental (1,453)

Scientific Name of Source Organism

	Homo sapiens (331)
	Escherichia coli (98)
	Halorhodospira halophila (75)
	Halobacterium salinarum NRC-1 (55)
	Halobacterium salinarum (50)
	Severe acute respiratory syndrome coronavirus 2 (42)
	synthetic construct (42)
	Human immunodeficiency virus 1 (41)
	Mus musculus (29)
	Escherichia coli K-12 (25)

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Taxonomy

	Bacteria (642)
	Eukaryota (509)
	Archaea (158)
	Riboviria (142)
	other sequences (42)
	Varidnaviria (20)
	Duplodnaviria (15)
	Eukaryota (eukaryotes) (2)
	unclassified sequences (1)

Experimental Method

	X-RAY DIFFRACTION (1,451)
	NEUTRON DIFFRACTION (3)

Polymer Entity Type

	Protein (1,433)
	DNA (32)
	RNA (6)

Refinement Resolution (Å)

	0.5 - 1.0 (9)
	1.0 - 1.5 (136)
	1.5 - 2.0 (483)
	2.0 - 2.5 (433)
	2.5 - 3.0 (239)
	3.0 - 3.5 (98)
	3.5 - 4.0 (26)
	4.0 - 4.5 (8)
	> 4.5 (22)

Release Date

	1985 - 1989 (3)
	1990 - 1994 (7)
	1995 - 1999 (46)
	2000 - 2004 (131)
	2005 - 2009 (202)
	2010 - 2014 (314)
	2015 - 2019 (317)
	2020 - 2024 (404)
	2025 - 2029 (29)

Enzyme Classification Name

	Transferases (237)
	Hydrolases (246)
	Oxidoreductases (119)
	Lyases (103)
	Isomerases (14)
	Ligases (13)
	Translocases (3)

Membrane Protein Annotation

	PDBTM (178)
	MemProtMD (165)
	mpstruc (114)
	OPM (41)

Symmetry Type

	Cyclic (814)
	Asymmetric (568)
	Dihedral (142)
	Tetrahedral (14)
	Icosahedral (2)

SCOP Classification

	All beta proteins (222)
	Alpha and beta proteins (a+b) (254)
	Alpha and beta proteins (a/b) (161)
	Artifacts (143)
	Membrane and cell surface proteins and peptides (126)
	All alpha proteins (56)
	Coiled coil proteins (33)
	Multi-domain proteins (alpha and beta) (10)
	Small proteins (7)
	Low resolution protein structures (1)

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AllSelected

1 to 25 of 1,453 Structures

Page 1 of 59

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174L \| pdb_0000174l	Download File View File

PROTEIN FLEXIBILITY AND ADAPTABILITY SEEN IN 25 CRYSTAL FORMS OF T4 LYSOZYME

Zhang, X.-J., Matthews, B.W.

(1995) J Mol Biology 250: 527-552

Released	1995-07-10
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Tequatrovirus T4
Macromolecule	T4 LYSOZYME (protein)
Unique Ligands	SO4

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1A8Q \| pdb_00001a8q	Download File View File

BROMOPEROXIDASE A1

Hofmann, B., Toelzer, S., Pelletier, I., Altenbuchner, J., Van Pee, K.-H., Hecht, H.-J.

(1998) J Mol Biology 279: 889-900

Released	1998-06-17
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Kitasatospora aureofaciens
Macromolecule	BROMOPEROXIDASE A1 (protein)

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1AIQ \| pdb_00001aiq	Download File View File

CRYSTAL STRUCTURE OF THYMIDYLATE SYNTHASE R126E MUTANT

Strop, P., Montfort, W.R.

(1997) Protein Sci 6: 2504-2511

Released	1997-11-12
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Escherichia coli
Macromolecule	THYMIDYLATE SYNTHASE (protein)
Unique Ligands	CB3, UMP

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1AN5 \| pdb_00001an5	Download File View File

E. COLI THYMIDYLATE SYNTHASE IN COMPLEX WITH CB3717

Stout, T.J., Sage, C.R., Stroud, R.M.

(1998) Structure 6: 839-848

Released	1998-07-01
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Escherichia coli
Macromolecule	THYMIDYLATE SYNTHASE (protein)
Unique Ligands	CB3, PO4

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1AP9 \| pdb_00001ap9	Download File View File

X-RAY STRUCTURE OF BACTERIORHODOPSIN FROM MICROCRYSTALS GROWN IN LIPIDIC CUBIC PHASES

Pebay-Peyroula, E., Rummel, G., Rosenbusch, J.P., Landau, E.M.

(1997) Science 277: 1676-1681

Released	1998-09-16
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Halobacterium salinarum
Macromolecule	BACTERIORHODOPSIN (protein)
Unique Ligands	RET

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1AVH \| pdb_00001avh	Download File View File

CRYSTAL AND MOLECULAR STRUCTURE OF HUMAN ANNEXIN V AFTER REFINEMENT. IMPLICATIONS FOR STRUCTURE, MEMBRANE BINDING AND ION CHANNEL FORMATION OF THE ANNEXIN FAMILY OF PROTEINS

Huber, R., Berendes, R., Burger, A., Schneider, M., Karshikov, A., Luecke, H., Roemisch, J., Paques, E.

(1992) J Mol Biology 223: 683-704

Released	1994-01-31
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	ANNEXIN V (protein)
Unique Ligands	CA, SO4

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1AX8 \| pdb_00001ax8	Download File View File

Human obesity protein, leptin

Zhang, F., Beals, J.M., Briggs, S.L., Clawson, D.K., Wery, J.-P., Schevitz, R.W.

(1997) Nature 387: 206-209

Released	1998-11-25
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	OBESITY PROTEIN (protein)

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1AXW \| pdb_00001axw	Download File View File

E. COLI THYMIDYLATE SYNTHASE IN COMPLEX WITH METHOTREXATE (MTX) AND 2'-DEOXYURIDINE 5'-MONOPHOSPHATE (DUMP)

Stout, T.J., Sage, C.R., Stroud, R.M.

To be published

Released	1998-10-28
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Escherichia coli
Macromolecule	THYMIDYLATE SYNTHASE (protein)
Unique Ligands	MTX, UMP

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1BQ1 \| pdb_00001bq1	Download File View File

E. COLI THYMIDYLATE SYNTHASE MUTANT N177A IN COMPLEX WITH CB3717 AND 2'-DEOXYURIDINE 5'-MONOPHOSPHATE (DUMP)

Reyes, C.L., Sage, C.R., Rutenber, E.E., Finer-Moore, J.S., Stroud, R.M.

(1998) J Mol Biology 284: 699-712

Released	1999-05-18
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Escherichia coli
Macromolecule	THYMIDYLATE SYNTHASE (protein)
Unique Ligands	CB3, UMP

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1BQ5 \| pdb_00001bq5	Download File View File

NITRITE REDUCTASE FROM ALCALIGENES XYLOSOXIDANS GIFU 1051

Inoue, T., Gotowda, M., Deligeer, Suzuki, S., Kataoka, K., Yamaguchi, K., Watanabe, H., Goho, M., Yasushi, K.A.I.

(1998) J Biochem 124: 876-879

Released	1999-08-21
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	NITRITE REDUCTASE (protein)
Unique Ligands	CU

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1BRX \| pdb_00001brx	Download File View File

BACTERIORHODOPSIN/LIPID COMPLEX

Luecke, H., Richter, H.T., Lanyi, J.

(1998) Science 280: 1934-1937

Released	1999-01-27
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Halobacterium salinarum
Macromolecule	BACTERIORHODOPSIN (protein)
Unique Ligands	RET

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1C3W \| pdb_00001c3w	Download File View File

BACTERIORHODOPSIN/LIPID COMPLEX AT 1.55 A RESOLUTION

Luecke, H.

(1999) J Mol Biology 291: 899-911

Released	1999-09-15
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Halobacterium salinarum
Macromolecule	BACTERIORHODOPSIN (GROUND STATE WILD TYPE "BR") (protein)
Unique Ligands	LI1, RET, SQU

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1C51 \| pdb_00001c51	Download File View File

PHOTOSYNTHETIC REACTION CENTER AND CORE ANTENNA SYSTEM (TRIMERIC), ALPHA CARBON ONLY

Klukas, O., Schubert, W.D., Jordan, P., Krauss, N., Fromme, P., Witt, H.T., Saenger, W.

(1999) J Biological Chem 274: 7351-7360

Released	2000-03-31
Method	X-RAY DIFFRACTION 4 Å
Organisms	Synechococcus elongatus
Macromolecule	Unique protein chains: 8
Unique Ligands	CLA, PQN, SF4

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1C8R \| pdb_00001c8r	Download File View File

BACTERIORHODOPSIN D96N BR STATE AT 2.0 A RESOLUTION

Luecke, H.

(1999) Science 286: 255-260

Released	1999-10-20
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Halobacterium salinarum
Macromolecule	PROTEIN (BACTERIORHODOPSIN) (protein)
Unique Ligands	LI1, RET, SQU

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1C8S \| pdb_00001c8s	Download File View File

BACTERIORHODOPSIN D96N LATE M STATE INTERMEDIATE

Luecke, H.

(1999) Science 286: 255-260

Released	1999-10-20
Method	X-RAY DIFFRACTION 2 Å
Organisms	Halobacterium salinarum
Macromolecule	BACTERIORHODOPSIN ("M" STATE INTERMEDIATE) (protein)
Unique Ligands	LI1, RET, SQU

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1CAV \| pdb_00001cav	Download File View File

THE THREE-DIMENSIONAL STRUCTURE OF CANAVALIN FROM JACK BEAN (CANAVALIA ENSIFORMIS)

Ko, T-P., Ng, J.D., McPherson, A.

(1993) Acta Crystallogr D Biol Crystallogr 49: 478-489

Released	1993-10-31
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Canavalia ensiformis
Macromolecule	CANAVALIN (protein)

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1CKE \| pdb_00001cke	Download File View File

CMP KINASE FROM ESCHERICHIA COLI FREE ENZYME STRUCTURE

Briozzo, P., Golinelli-Pimpaneau, B.

(1998) Structure 6: 1517-1527

Released	1999-09-20
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Escherichia coli
Macromolecule	PROTEIN (CYTIDINE MONOPHOSPHATE KINASE) (protein)
Unique Ligands	SO4

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1CWQ \| pdb_00001cwq	Download File View File

M INTERMEDIATE STRUCTURE OF THE WILD TYPE BACTERIORHODOPSIN IN COMBINATION WITH THE GROUND STATE STRUCTURE

Sass, H.J., Berendzen, J., Neff, D., Gessenich, R., Ormos, P., Bueldt, G.

(2000) Nature 406: 649-653

Released	1999-10-20
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Halobacterium salinarum
Macromolecule	BACTERIORHODOPSIN ("M" STATE INTERMEDIATE IN COMBINATION WITH GROUND STATE) (protein)
Unique Ligands	HEX, OCT, RET, TRD, UND

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1D2Q \| pdb_00001d2q	Download File View File

CRYSTAL STRUCTURE OF HUMAN TRAIL

Cha, S.-S.

(1999) Immunity 11: 253-261

Released	2000-02-11
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	TNF-RELATED APOPTOSIS INDUCING LIGAND (protein)

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1DDU \| pdb_00001ddu	Download File View File

E. COLI THYMIDYLATE SYNTHASE IN COMPLEX WITH CB3717 AND 2',5'-DIDEOXYURIDINE (DDURD)

Stout, T.J., Sage, C.R., Stroud, R.M.

(1998) Structure 6: 839-848

Released	1998-07-01
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Escherichia coli
Macromolecule	THYMIDYLATE SYNTHASE (protein)
Unique Ligands	CB3, DDU, PO4

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1DI6 \| pdb_00001di6	Download File View File

1.45 A CRYSTAL STRUCTURE OF THE MOLYBDENUMM COFACTOR BIOSYNTHESIS PROTEIN MOGA FROM ESCHERICHIA COLI

Liu, M.T.W., Wuebbens, M.M., Rajagopalan, K.V., Schindelin, H.

(2000) J Biological Chem 275: 1814-1822

Released	2000-01-19
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Escherichia coli
Macromolecule	MOLYBDENUM COFACTOR BIOSYNTHETIC ENZYME (protein)
Unique Ligands	SO4

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1DI7 \| pdb_00001di7	Download File View File

1.60 ANGSTROM CRYSTAL STRUCTURE OF THE MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN MOGA FROM ESCHERICHIA COLI

Liu, M.T.W., Wuebbens, M.M., Rajagopalan, K.V., Schindelin, H.

(2000) J Biological Chem 275: 1814-1822

Released	2000-01-19
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Escherichia coli
Macromolecule	MOLYBDENUM COFACTOR BIOSYNTHETIC ENZYME (protein)
Unique Ligands	SO4

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1DKR \| pdb_00001dkr	Download File View File

CRYSTAL STRUCTURES OF BACILLUS SUBTILIS PHOSPHORIBOSYLPYROPHOSPHATE SYNTHETASE: MOLECULAR BASIS OF ALLOSTERIC INHIBITION AND ACTIVATION.

Eriksen, T.A., Kadziola, A., Bentsen, A.-K., Harlow, K.W., Larsen, S.

(2000) Nat Struct Biol 7: 303-308

Released	2000-04-05
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Bacillus subtilis
Macromolecule	PHOSPHORIBOSYL PYROPHOSPHATE SYNTHETASE (protein)
Unique Ligands	SO4

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1DKU \| pdb_00001dku	Download File View File

CRYSTAL STRUCTURES OF BACILLUS SUBTILIS PHOSPHORIBOSYLPYROPHOSPHATE SYNTHETASE: MOLECULAR BASIS OF ALLOSTERIC INHIBITION AND ACTIVATION.

Eriksen, T.A., Kadziola, A., Bentsen, A.-K., Harlow, K.W., Larsen, S.

(2000) Nat Struct Biol 7: 303-308

Released	2000-04-05
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Bacillus subtilis
Macromolecule	PROTEIN (PHOSPHORIBOSYL PYROPHOSPHATE SYNTHETASE) (protein)
Unique Ligands	ABM, AP2