RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

235,183 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Structure Keywords HAS EXACT PHRASE "PLANT PROTEIN"

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 1,027 Structures.

Refinements

Structure Determination Methodology

experimental (1,027)

Scientific Name of Source Organism

	Arabidopsis thaliana (243)
	Thaumatococcus daniellii (185)
	Dioscoreophyllum cumminsii (37)
	Oryza sativa Japonica Group (24)
	Glycine max (20)
	Medicago truncatula (20)
	Crambe hispanica subsp. abyssinica (17)
	Oldenlandia affinis (15)
	Zea mays (15)
	Oryza sativa (14)

More...

Taxonomy

	Eukaryota (995)
	Bacteria (29)
	other sequences (8)
	Eukaryota (eukaryotes) (5)

Experimental Method

	X-RAY DIFFRACTION (783)
	SOLUTION NMR (129)
	ELECTRON MICROSCOPY (113)
	ELECTRON CRYSTALLOGRAPHY (2)
	SOLUTION SCATTERING (1)

Polymer Entity Type

	Protein (1,027)
	DNA (3)
	RNA (2)

Refinement Resolution (Å)

	< 0.5 (1)
	0.5 - 1.0 (21)
	1.0 - 1.5 (149)
	1.5 - 2.0 (240)
	2.0 - 2.5 (220)
	2.5 - 3.0 (126)
	3.0 - 3.5 (89)
	3.5 - 4.0 (41)
	4.0 - 4.5 (4)
	> 4.5 (7)

Release Date

	1980 - 1984 (1)
	1995 - 1999 (9)
	2000 - 2004 (61)
	2005 - 2009 (104)
	2010 - 2014 (113)
	2015 - 2019 (228)
	2020 - 2024 (467)
	2025 - 2029 (44)

Enzyme Classification Name

	Transferases (117)
	Hydrolases (76)
	Oxidoreductases (36)
	Lyases (37)
	Isomerases (14)
	Ligases (3)

Membrane Protein Annotation

	PDBTM (36)
	OPM (28)
	mpstruc (19)
	MemProtMD (13)

Symmetry Type

	Asymmetric (716)
	Cyclic (255)
	Dihedral (81)
	Helical (1)
	Tetrahedral (1)

SCOP Classification

	All beta proteins (215)
	Alpha and beta proteins (a+b) (96)
	Alpha and beta proteins (a/b) (42)
	Small proteins (63)
	Artifacts (33)
	All alpha proteins (27)
	Membrane and cell surface proteins and peptides (2)
	Peptides (2)

AllSelected

1 to 25 of 1,027 Structures

Page 1 of 42

Sort by

Explore in 3D

1B6F \| pdb_00001b6f	Download File View File

BIRCH POLLEN ALLERGEN BET V 1

Schweimer, K., Sticht, H., Boehm, M., Roesch, P.

(1999) Appl Magn Reson 17: 449-464

Released	2000-01-17
Method	SOLUTION NMR
Organisms	Betula pendula
Macromolecule	PROTEIN (MAJOR POLLEN ALLERGEN BET V 1-A) (protein)

Explore in 3D

1BQP \| pdb_00001bqp	Download File View File

THE STRUCTURE OF THE PEA LECTIN-D-MANNOPYRANOSE COMPLEX

Ruzeinikov, S.N., Mikhailova, I.Y., Tsygannik, I.N., Pangborn, W., Duax, W., Pletnev, V.Z.

(1998) Russ J Bioorg Chem 24: 277-279

Released	1998-08-26
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Pisum sativum
Macromolecule	PROTEIN (LECTIN) (protein)
Unique Ligands	BMA, CA, MAN, MN

Explore in 3D

1BWU \| pdb_00001bwu	Download File View File

MANNOSE-SPECIFIC AGGLUTININ (LECTIN) FROM GARLIC (ALLIUM SATIVUM) BULBS COMPLEXED WITH ALPHA-D-MANNOSE

Chandra, N.R., Ramachandraiah, G., Bachhawat, K., Dam, T.K., Surolia, A., Vijayan, M.

(1999) J Mol Biology 285: 1157-1168

Released	1999-01-20
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Allium sativum
Macromolecule	PROTEIN (AGGLUTININ) (protein)
Unique Ligands	MAN

Explore in 3D

1C4E \| pdb_00001c4e	Download File View File

GURMARIN FROM GYMNEMA SYLVESTRE

Fletcher, J.I., Dingley, A.J., King, G.F.

(1999) Eur J Biochem 264: 525-533

Released	1999-08-27
Method	SOLUTION NMR
Organisms	Gymnema sylvestre
Macromolecule	PROTEIN (GURMARIN) (protein)

Explore in 3D

1CRN \| pdb_00001crn	Download File View File

WATER STRUCTURE OF A HYDROPHOBIC PROTEIN AT ATOMIC RESOLUTION. PENTAGON RINGS OF WATER MOLECULES IN CRYSTALS OF CRAMBIN

Hendrickson, W.A., Teeter, M.M.

(1984) Proc Natl Acad Sci U S A 81: 6014-6018

Released	1981-07-28
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Crambe hispanica subsp. abyssinica
Macromolecule	CRAMBIN (protein)

Explore in 3D

1CXR \| pdb_00001cxr	Download File View File

AUTOMATED 2D NOESY ASSIGNMENT AND STRUCTURE CALCULATION OF CRAMBIN(S22/I25) WITH SELF-CORRECTING DISTANCE GEOMETRY BASED NOAH/DIAMOD PROGRAMS

Xu, Y., Wu, J., Gorenstein, D., Braun, W.

(1999) J Magn Reson (1969 136: 76-85

Released	1999-09-07
Method	SOLUTION NMR
Organisms	Crambe hispanica subsp. abyssinica
Macromolecule	CRAMBIN (protein)

Explore in 3D

1DF6 \| pdb_00001df6	Download File View File

1H NMR SOLUTION STRUCTURE OF CYCLOVIOLACIN O1

Craik, D.J., Daly, N.L., Bond, T., Waine, C.

(1999) J Mol Biology 294: 1327-1336

Released	2000-03-01
Method	SOLUTION NMR
Organisms	Viola odorata
Macromolecule	CYCLOVIOLACIN O1 (protein)

Explore in 3D

1DGR \| pdb_00001dgr	Download File View File

Refined crystal structure of canavalin from jack bean

Ko, T.-P., McPherson, A.

(2001) Acta Crystallogr D Biol Crystallogr 57: 829-839

Released	1999-12-29
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Canavalia ensiformis
Macromolecule	CANAVALIN (protein)
Unique Ligands	PO4

Explore in 3D

1DGW \| pdb_00001dgw	Download File View File

Structure of the rhombohedral crystal of canavalin from jack bean

Ko, T.-P., McPherson, A.

(2001) Acta Crystallogr D Biol Crystallogr 57: 829-839

Released	1999-12-20
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Canavalia ensiformis
Macromolecule	CANAVALIN (protein)
Unique Ligands	PO4

Explore in 3D

1EHD \| pdb_00001ehd	Download File View File

CRYSTAL STRUCTURE OF URTICA DIOICA AGGLUTININ ISOLECTIN VI

Harata, K., Muraki, M.

(2000) J Mol Biology 297: 673-681

Released	2000-04-05
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Urtica dioica
Macromolecule	AGGLUTININ ISOLECTIN VI (protein)

Explore in 3D

1EHH \| pdb_00001ehh	Download File View File

CRYSTAL STRUCTURE OF URTICA DIOICA AGGLUTININ ISOLECTIN VI COMPLEX WITH TRI-N-ACETYLCHITOTRIOSE

Harata, K., Muraki, M.

(2000) J Mol Biology 297: 673-681

Released	2000-04-05
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Urtica dioica
Macromolecule	AGGLUTININ ISOLECTIN VI (protein)
Unique branched monosaccharides	NAG

Explore in 3D

1EJG \| pdb_00001ejg	Download File View File

CRAMBIN AT ULTRA-HIGH RESOLUTION: VALENCE ELECTRON DENSITY.

Jelsch, C., Teeter, M.M., Lamzin, V., Pichon-Lesme, V., Blessing, B., Lecomte, C.

(2000) Proc Natl Acad Sci U S A 97: 3171-3176

Released	2000-04-05
Method	X-RAY DIFFRACTION 0.54 Å
Organisms	Crambe hispanica subsp. abyssinica
Macromolecule	CRAMBIN (PRO22,SER22/LEU25,ILE25) (protein)

Explore in 3D

1F56 \| pdb_00001f56	Download File View File

SPINACH PLANTACYANIN

Einsle, O., Mehrabian, Z., Nalbandyan, R., Messerschmidt, A.

(2000) J Biol Inorg Chem 5: 666-672

Released	2000-11-01
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Spinacia oleracea
Macromolecule	PLANTACYANIN (protein)
Unique Ligands	CU1, SO4

Explore in 3D

1F7S \| pdb_00001f7s	Download File View File

CRYSTAL STRUCTURE OF ADF1 FROM ARABIDOPSIS THALIANA

Bowman, G.D., Nodelman, I.M., Lindberg, U., Chua, N.H., Schutt, C.E.

(2000) Proteins 41: 374-384

Released	2000-11-15
Method	X-RAY DIFFRACTION 2 Å
Organisms	Arabidopsis thaliana
Macromolecule	ACTIN DEPOLYMERIZING FACTOR (ADF) (protein)
Unique Ligands	LDA

Explore in 3D

1FUW \| pdb_00001fuw	Download File View File

SOLUTION STRUCTURE AND BACKBONE DYNAMICS OF A DOUBLE MUTANT SINGLE-CHAIN MONELLIN(SCM) DETERMINED BY NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY

Sung, Y.H., Shin, J., Jung, J., Lee, W.

(2001) J Biological Chem 276: 19624-19630

Released	2001-06-06
Method	SOLUTION NMR
Organisms	Dioscoreophyllum cumminsii
Macromolecule	MONELLIN (protein)

Explore in 3D

1FXZ \| pdb_00001fxz	Download File View File

CRYSTAL STRUCTURE OF SOYBEAN PROGLYCININ A1AB1B HOMOTRIMER

Adachi, M., Takenaka, Y., Gidamis, A.B., Mikami, B., Utsumi, S.

(2001) J Mol Biology 305: 291-305

Released	2001-10-03
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Glycine max
Macromolecule	GLYCININ G1 (protein)

Explore in 3D

1HTX \| pdb_00001htx	Download File View File

SOLUTION STRUCTURE OF THE MAIN ALPHA-AMYLASE INHIBITOR FROM AMARANTH SEEDS

Martins, J.C., Enassar, M., Willem, R., Wieruzeski, J.M., Lippens, G., Wodak, S.J.

(2001) Eur J Biochem 268: 2379-2389

Released	2001-07-18
Method	SOLUTION NMR
Organisms	Amaranthus hypochondriacus
Macromolecule	ALPHA-AMYLASE INHIBITOR AAI (protein)

Explore in 3D

1IB9 \| pdb_00001ib9	Download File View File

SOLUTION STRUCTURE OF MCOTI-II, A MACROCYCLIC TRYPSIN INHIBITOR

Felizmenio-Quimio, M.E., Daly, N.L., Craik, D.J.

(2001) J Biological Chem 276: 22875-22882

Released	2001-07-18
Method	SOLUTION NMR
Organisms	Momordica cochinchinensis
Macromolecule	TRYPSIN INHIBITOR II (protein)

Explore in 3D

1IV7 \| pdb_00001iv7	Download File View File

Crystal Structure of Single Chain Monellin

Tamada, T., Kato, Y., Kuroki, R.

To be published

Released	2003-10-07
Method	X-RAY DIFFRACTION 1.82 Å
Organisms	Dioscoreophyllum cumminsii
Macromolecule	Monellin (protein)

Explore in 3D

1IV9 \| pdb_00001iv9	Download File View File

Crystal Structure of Single Chain Monellin

Tamada, T., Kato, Y., Kuroki, R.

To be published

Released	2003-10-07
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Dioscoreophyllum cumminsii
Macromolecule	Monellin (protein)

Explore in 3D

1J4S \| pdb_00001j4s	Download File View File

Structure of Artocarpin: a Lectin with Mannose Specificity (Form 1)

Pratap, J.V., Jeyaprakash, A.A., Rani, P.G., Sekar, K., Surolia, A., Vijayan, M.

(2002) J Mol Biology 317: 237-247

Released	2002-03-27
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Artocarpus integer
Macromolecule	Artocarpin (protein)

Explore in 3D

1J4T \| pdb_00001j4t	Download File View File

Structure of Artocarpin: a Lectin with Mannose Specificity (Form 2)

Pratap, J.V., Jeyaprakash, A.A., Rani, P.G., Sekar, K., Surolia, A., Vijayan, M.

(2002) J Mol Biology 317: 237-247

Released	2002-03-27
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Artocarpus integer
Macromolecule	Artocarpin (protein)

Explore in 3D

1J4U \| pdb_00001j4u	Download File View File

Structure of Artocarpin Complexed with Me-alpha-Mannose

Pratap, J.V., Jeyaprakash, A.A., Rani, P.G., Sekar, K., Surolia, A., Vijayan, M.

(2002) J Mol Biology 317: 237-247

Released	2002-03-27
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Artocarpus integer
Macromolecule	Artocarpin (protein)
Unique Ligands	MMA

Explore in 3D

1JJZ \| pdb_00001jjz	Download File View File

REFINED STRUCTURE AND DISULFIDE PAIRING OF THE KALATA B1 PEPTIDE

Skjeldal, L., Gran, L., Sletten, K., Volkman, B.F.

(2002) Arch Biochem Biophys 399: 142-148

Released	2002-06-12
Method	SOLUTION NMR
Organisms	Oldenlandia affinis
Macromolecule	Kalata-B4 (protein)

Explore in 3D

1JXT \| pdb_00001jxt	Download File View File

CRAMBIN MIXED SEQUENCE FORM AT 160 K. PROTEIN/WATER SUBSTATES

Teeter, M.M., Yamano, A., Stec, B., Mohanty, U.

(2001) Proc Natl Acad Sci U S A 98: 11242-11247

Released	2001-10-31
Method	X-RAY DIFFRACTION 0.89 Å
Organisms	Crambe hispanica subsp. abyssinica
Macromolecule	Crambin (protein)
Unique Ligands	EOH

1 to 25 of 1,027 Structures

Page 1 of 42

Sort by

About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy

Support
Contact Us
Help
Website FAQ
Glossary
Service Status

RCSB PDB is hosted by

RCSB PDB is a member of the

RCSB Partners
Nucleic Acid Knowledgebase

wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1B6F | pdb_00001b6f

1BQP | pdb_00001bqp

1BWU | pdb_00001bwu

1C4E | pdb_00001c4e

1CRN | pdb_00001crn

1CXR | pdb_00001cxr

1DF6 | pdb_00001df6

1DGR | pdb_00001dgr

1DGW | pdb_00001dgw

1EHD | pdb_00001ehd

1EHH | pdb_00001ehh

1EJG | pdb_00001ejg

1F56 | pdb_00001f56

1F7S | pdb_00001f7s

1FUW | pdb_00001fuw

1FXZ | pdb_00001fxz

1HTX | pdb_00001htx

1IB9 | pdb_00001ib9

1IV7 | pdb_00001iv7

1IV9 | pdb_00001iv9

1J4S | pdb_00001j4s

1J4T | pdb_00001j4t

1J4U | pdb_00001j4u

1JJZ | pdb_00001jjz

1JXT | pdb_00001jxt