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234,785 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Enzyme Classification Number = 3.6.5.2

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Search Summary

This query matches 38 Structures.

Refinements

Structure Determination Methodology

experimental (38)

Scientific Name of Source Organism

	Homo sapiens (13)
	Human immunodeficiency virus (6)
	Methanothermobacter thermautotrophicus (6)
	Methanothermobacter thermautotrophicus str. Delta H (3)
	Histophilus somni 2336 (2)
	Escherichia coli K-12 (1)
	Francisella tularensis (1)
	Francisella tularensis subsp. tularensis (1)
	Haemophilus influenzae (1)
	Human immunodeficiency virus 1 (1)

More...

Taxonomy

	Eukaryota (14)
	Archaea (10)
	Bacteria (8)
	Riboviria (7)

Experimental Method

	X-RAY DIFFRACTION (36)
	ELECTRON MICROSCOPY (2)

Polymer Entity Type

Protein (38)

Refinement Resolution (Å)

	1.5 - 2.0 (15)
	2.0 - 2.5 (15)
	2.5 - 3.0 (6)
	3.0 - 3.5 (1)
	3.5 - 4.0 (1)

Release Date

	2000 - 2004 (19)
	2005 - 2009 (3)
	2010 - 2014 (10)
	2015 - 2019 (4)
	2020 - 2024 (2)

Enzyme Classification Name

	Transferases (38)
	Hydrolases (5)

Symmetry Type

	Dihedral (24)
	Cyclic (13)
	Asymmetric (3)

SCOP Classification

	Alpha and beta proteins (a/b) (31)
	Artifacts (4)

AllSelected

1 to 25 of 38 Structures

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1EJ2 \| pdb_00001ej2	Download File View File

Crystal structure of methanobacterium thermoautotrophicum nicotinamide mononucleotide adenylyltransferase with bound NAD+

Saridakis, V., Christendat, D., Kimber, M.S., Edwards, A.M., Pai, E.F., Midwest Center for Structural Genomics (MCSG), Northeast Structural Genomics Consortium (NESG)

(2001) J Biological Chem 276: 7225-7232

Released	2001-03-14
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE (protein)
Unique Ligands	NA, NAD, SO4

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1F9A \| pdb_00001f9a	Download File View File

CRYSTAL STRUCTURE ANALYSIS OF NMN ADENYLYLTRANSFERASE FROM METHANOCOCCUS JANNASCHII

D'Angelo, I., Raffaelli, N., Dabusti, V., Lorenzi, T., Magni, G., Rizzi, M.

(2000) Structure 8: 993-1004

Released	2001-01-10
Method	X-RAY DIFFRACTION 2 Å
Organisms	Methanocaldococcus jannaschii
Macromolecule	HYPOTHETICAL PROTEIN MJ0541 (protein)
Unique Ligands	ATP, MG

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1GZU \| pdb_00001gzu	Download File View File

Crystal Structure of Human Nicotinamide Mononucleotide Adenylyltransferase in Complex with NMN

Werner, E., Ziegler, M., Lerner, F., Schweiger, M., Heinemann, U.

(2002) FEBS Lett 516: 239-244

Released	2002-07-05
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens
Macromolecule	NICOTINAMIDE MONONUCLEOTIDE ADENYLYL TRANSFERASE (protein)
Unique Ligands	NMN

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1HYB \| pdb_00001hyb	Download File View File

CRYSTAL STRUCTURE OF AN ACTIVE SITE MUTANT OF METHANOBACTERIUM THERMOAUTOTROPHICUM NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE

Saridakis, V., Christendat, D., Kimber, M.S., Edwards, A.M., Pai, E.F.

(2001) J Biological Chem 276: 7225-7232

Released	2001-03-14
Method	X-RAY DIFFRACTION 2 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE (protein)
Unique Ligands	NMN, SO4

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1KKU \| pdb_00001kku	Download File View File

Crystal structure of nuclear human nicotinamide mononucleotide adenylyltransferase

Garavaglia, S., D'Angelo, I., Emanuelli, M., Carnevali, F., Pierella, F., Magni, G., Rizzi, M.

(2002) J Biological Chem 277: 8524-8530

Released	2002-06-10
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE (protein)

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1KQN \| pdb_00001kqn	Download File View File

Crystal structure of NMN/NaMN adenylyltransferase complexed with NAD

Zhou, T., Kurnasov, O., Tomchick, D.R., Binns, D.D., Grishin, N.V., Marquez, V.E., Osterman, A.L., Zhang, H.

(2003) J Biological Chem 277: 13148-13154

Released	2003-01-07
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	NICOTINAMIDE MONONUCLEOTIDE ADENYLYL TRANSFERASE (protein)
Unique Ligands	NAD, XE

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1KQO \| pdb_00001kqo	Download File View File

Crystal structure of NMN/NaMN adenylyltransferase complexed with deamido-NAD

Zhou, T., Kurnasov, O., Tomchick, D.R., Binns, D.D., Grishin, N.V., Marquez, V.E., Osterman, A.L., Zhang, H.

(2002) J Biological Chem 277: 13148-13154

Released	2003-01-07
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	NICOTINAMIDE MONONUCLEOTIDE ADENYLYL TRANSFERASE (protein)
Unique Ligands	DND

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1KR2 \| pdb_00001kr2	Download File View File

CRYSTAL STRUCTURE OF HUMAN NMN/NAMN ADENYLYL TRANSFERASE COMPLEXED WITH TIAZOFURIN ADENINE DINUCLEOTIDE (TAD)

Zhou, T., Kurnasov, O., Tomchick, D.R., Binns, D.D., Grishin, N.V., Marquez, V.E., Osterman, A.L., Zhang, H.

(2002) J Biological Chem 277: 13148-13154

Released	2003-01-08
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	NICOTINAMIDE MONONUCLEOTIDE ADENYLYL TRANSFERASE (protein)
Unique Ligands	TAD

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1LW7 \| pdb_00001lw7	Download File View File

NADR PROTEIN FROM HAEMOPHILUS INFLUENZAE

Singh, S.K., Kurnasov, O.V., Chen, B., Robinson, H., Grishin, N.V., Osterman, A.L., Zhang, H.

(2002) J Biological Chem 277: 33291-33299

Released	2002-08-07
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Haemophilus influenzae
Macromolecule	TRANSCRIPTIONAL REGULATOR NADR (protein)
Unique Ligands	NAD, SO4

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1M8F \| pdb_00001m8f	Download File View File

Crystal Structure Of Methanobacterium Thermoautotrophicum Nicotinamide Mononucleotide Adenylyltransferase Mutant R11A complexed with NAD

Saridakis, V., Pai, E.F.

(2003) J Biological Chem 278: 34356-34363

Released	2003-07-15
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	nicotinamide-nucleotide adenylyltransferase (protein)
Unique Ligands	NAD

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1M8G \| pdb_00001m8g	Download File View File

Crystal Structure Of Methanobacterium Thermoautotrophicum Nicotinamide Mononucleotide Adenylyltransferase Mutant R11K complexed with NAD

Saridakis, V., Pai, E.F.

(2003) J Biological Chem 278: 34356-34363

Released	2003-07-15
Method	X-RAY DIFFRACTION 2 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	Nicotinamide-nucleotide Adenylyltransferase (protein)
Unique Ligands	NAD

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1M8J \| pdb_00001m8j	Download File View File

Crystal Structure Of Methanobacterium Thermoautotrophicum Nicotinamide Mononucleotide Adenylyltransferase Mutant R136A complexed with NAD

Saridakis, V., Pai, E.F.

(2003) J Biological Chem 278: 34356-34363

Released	2003-07-15
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	Nicotinamide-nucleotide Adenylyltransferase (protein)
Unique Ligands	NAD, SO4

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1M8K \| pdb_00001m8k	Download File View File

Crystal Structure Of Methanobacterium Thermoautotrophicum Nicotinamide Mononucleotide Adenylyltransferase Mutant H19A complexed with NAD

Saridakis, V., Pai, E.F.

(2003) J Biological Chem 278: 34356-34363

Released	2003-07-15
Method	X-RAY DIFFRACTION 3 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	Nicotinamide-nucleotide Adenylyltransferase (protein)
Unique Ligands	NAD, SO4

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1NUP \| pdb_00001nup	Download File View File

CRYSTAL STRUCTURE OF HUMAN CYTOSOLIC NMN/NaMN ADENYLYLTRANSFERASE COMPLEX WITH NMN

Zhang, X., Kurnasov, O.V., Karthikeyan, S., Grishin, N.V., Osterman, A.L., Zhang, H.

(2003) J Biological Chem 278: 13503-13511

Released	2003-06-03
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	FKSG76 (protein)
Unique Ligands	NMN, SO4

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1NUQ \| pdb_00001nuq	Download File View File

CRYSTAL STRUCTURE OF HUMAN CYTOSOLIC NMN/NaMN ADENYLYLTRANSFERASE COMPLEXED WITH NaAD

Zhang, X., Kurnasov, O.V., Karthikeyan, S., Grishin, N.V., Osterman, A.L., Zhang, H.

(2003) J Biological Chem 278: 13503-13511

Released	2003-06-03
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	FKSG76 (protein)
Unique Ligands	DND, SO4

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1NUR \| pdb_00001nur	Download File View File

CRYSTAL STRUCTURE OF HUMAN CYTOSOLIC NMN/NaMN ADENYLYLTRANSFERASE

Zhang, X., Kurnasov, O.V., Karthikeyan, S., Grishin, N.V., Osterman, A.L., Zhang, H.

(2003) J Biological Chem 278: 13503-13511

Released	2003-06-03
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Homo sapiens
Macromolecule	FKSG76 (protein)
Unique Ligands	SO4

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1NUS \| pdb_00001nus	Download File View File

CRYSTAL STRUCTURE OF HUMAN CYTOSOLIC NMN/NaMN ADENYLYLTRANSFERASE COMPLEXED WITH ATP ANALOG AND NMN

Zhang, X., Kurnasov, O.V., Karthikeyan, S., Grishin, N.V., Osterman, A.L., Zhang, H.

(2003) J Biological Chem 278: 13503-13511

Released	2003-06-03
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	FKSG76 (protein)
Unique Ligands	APC, NMN, SO4

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1NUT \| pdb_00001nut	Download File View File

CRYSTAL STRUCTURE OF HUMAN CYTOSOLIC NMN/NaMN ADENYLYLTRANSFERASE COMPLEXED WITH ATP ANALOG

Zhang, X., Kurnasov, O.V., Karthikeyan, S., Grishin, N.V., Osterman, A.L., Zhang, H.

(2003) J Biological Chem 278: 13503-13511

Released	2003-06-03
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	FKSG76 (protein)
Unique Ligands	APC, SO4

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1NUU \| pdb_00001nuu	Download File View File

CRYSTAL STRUCTURE OF HUMAN CYTOSOLIC NMN/NaMN ADENYLYLTRANSFERASE COMPLEXED WITH NAD

Zhang, X., Kurnasov, O.V., Karthikeyan, S., Grishin, N.V., Osterman, A.L., Zhang, H.

(2003) J Biological Chem 278: 13503-13511

Released	2003-06-03
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	FKSG76 (protein)
Unique Ligands	NAD, SO4

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2QJO \| pdb_00002qjo	Download File View File

crystal structure of a bifunctional NMN adenylyltransferase/ADP ribose pyrophosphatase (NadM) complexed with ADPRP and NAD from Synechocystis sp.

Huang, N., Sorci, L., Zhang, X., Brautigan, C., Raffaelli, N., Magni, G., Grishin, N.V., Osterman, A., Zhang, H.

(2008) Structure 16: 196-209

Released	2008-03-11
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Synechocystis sp. PCC 6803
Macromolecule	Bifunctional NMN adenylyltransferase/Nudix hydrolase (protein)
Unique Ligands	APR, NAD, POP, SO4

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2QJT \| pdb_00002qjt	Download File View File

Crystal structure of a bifunctional NMN adenylyltransferase/ADP ribose pyrophosphatase complexed with AMP and MN ion from Francisella tularensis

Huang, N., Sorci, L., Zhang, X., Brautigan, C., Raffaelli, N., Magni, G., Grishin, N.V., Osterman, A., Zhang, H.

(2008) Structure 16: 196-209

Released	2008-03-04
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Francisella tularensis
Macromolecule	Nicotinamide-nucleotide adenylyltransferase (protein)
Unique Ligands	AMP, MN

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2R5W \| pdb_00002r5w	Download File View File

Crystal structure of a bifunctional NMN adenylyltransferase/ADP ribose pyrophosphatase from Francisella tularensis

Huang, N., Sorci, L., Zhang, X., Brautigan, C., Li, X., Raffaelli, N., Grishin, N., Osterman, A., Zhang, H.

(2008) Structure 16: 196-209

Released	2008-03-04
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Francisella tularensis subsp. tularensis
Macromolecule	Nicotinamide-nucleotide adenylyltransferase (protein)
Unique Ligands	CL, MG

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3LET \| pdb_00003let	Download File View File

Crystal Structure of Fic domain containing AMPylator, VopS

Luong, P.H., Kinch, L.N., Brautigam, C.A., Grishin, N.V., Tomchick, D.R., Orth, K.

To be published

Released	2010-04-21
Method	X-RAY DIFFRACTION 1.802 Å
Organisms	Vibrio parahaemolyticus
Macromolecule	Adenosine monophosphate-protein transferase vopS (protein)

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3N3U \| pdb_00003n3u	Download File View File

Crystal Structure of IbpAFic2

Xiao, J.

(2010) Nat Struct Mol Biol 17: 1004-1010

Released	2010-07-14
Method	X-RAY DIFFRACTION 1.846 Å
Organisms	Histophilus somni 2336
Macromolecule	Adenosine monophosphate-protein transferase ibpA (protein)
Unique Ligands	SO4, ZN

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4AH9 \| pdb_00004ah9	Download File View File

Parallel screening of a low molecular weight compound library: do differences in methodology affect hit identification

Wielens, J., Heady, S.J., Rhodes, D.I., Mulder, R.J., Dolezal, O., Deadman, J.J., Newman, J., Chalmers, D.K., Parker, M.W., Peat, T.S., Scanlon, M.J.

(2013) J Biomol Screen 18: 147

Released	2012-12-19
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Human immunodeficiency virus
Macromolecule	INTEGRASE (protein)
Unique Ligands	0MB, CL, EDO, GOL, SO4, TAM

1 to 25 of 38 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1EJ2 | pdb_00001ej2

1F9A | pdb_00001f9a

1GZU | pdb_00001gzu

1HYB | pdb_00001hyb

1KKU | pdb_00001kku

1KQN | pdb_00001kqn

1KQO | pdb_00001kqo

1KR2 | pdb_00001kr2

1LW7 | pdb_00001lw7

1M8F | pdb_00001m8f

1M8G | pdb_00001m8g

1M8J | pdb_00001m8j

1M8K | pdb_00001m8k

1NUP | pdb_00001nup

1NUQ | pdb_00001nuq

1NUR | pdb_00001nur

1NUS | pdb_00001nus

1NUT | pdb_00001nut

1NUU | pdb_00001nuu

2QJO | pdb_00002qjo

2QJT | pdb_00002qjt

2R5W | pdb_00002r5w

3LET | pdb_00003let

3N3U | pdb_00003n3u

4AH9 | pdb_00004ah9