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235,183 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Enzyme Classification Number = 1.3

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Search Summary

This query matches 1,452 Structures.

Refinements

Structure Determination Methodology

experimental (1,452)

Scientific Name of Source Organism

	Homo sapiens (322)
	Mycobacterium tuberculosis H37Rv (64)
	Mycobacterium tuberculosis (57)
	Trypanosoma cruzi strain CL Brener (51)
	Escherichia coli (48)
	Solanum lycopersicum (43)
	Sus scrofa (42)
	Plasmodium falciparum 3D7 (35)
	Saccharomyces cerevisiae (30)
	Plasmodium falciparum (29)

More...

Taxonomy

	Eukaryota (758)
	Bacteria (683)
	Archaea (10)
	other sequences (7)
	Duplodnaviria (5)
	Varidnaviria (1)
	unclassified sequences (1)

Experimental Method

	X-RAY DIFFRACTION (1,372)
	ELECTRON MICROSCOPY (71)
	SOLUTION NMR (9)
	NEUTRON DIFFRACTION (3)

Polymer Entity Type

	Protein (1,452)
	RNA (5)

Refinement Resolution (Å)

	1.0 - 1.5 (97)
	1.5 - 2.0 (489)
	2.0 - 2.5 (485)
	2.5 - 3.0 (256)
	3.0 - 3.5 (84)
	3.5 - 4.0 (23)
	4.0 - 4.5 (7)
	> 4.5 (4)

Release Date

	1990 - 1994 (2)
	1995 - 1999 (37)
	2000 - 2004 (130)
	2005 - 2009 (239)
	2010 - 2014 (386)
	2015 - 2019 (330)
	2020 - 2024 (285)
	2025 - 2029 (43)

Enzyme Classification Name

	Oxidoreductases (1,452)
	Transferases (114)
	Lyases (90)
	Hydrolases (73)
	Translocases (4)
	Ligases (4)
	Isomerases (1)

Membrane Protein Annotation

	PDBTM (88)
	MemProtMD (78)
	mpstruc (43)
	OPM (33)

Symmetry Type

	Asymmetric (695)
	Cyclic (409)
	Dihedral (401)
	Icosahedral (1)
	Tetrahedral (1)

SCOP Classification

	Alpha and beta proteins (a/b) (654)
	All alpha proteins (163)
	Alpha and beta proteins (a+b) (150)
	Multi-domain proteins (alpha and beta) (79)
	Artifacts (88)
	Membrane and cell surface proteins and peptides (45)
	All beta proteins (46)
	Peptides (2)

AllSelected

1 to 25 of 1,452 Structures

Page 1 of 59

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1ARZ \| pdb_00001arz	Download File View File

ESCHERICHIA COLI DIHYDRODIPICOLINATE REDUCTASE IN COMPLEX WITH NADH AND 2,6 PYRIDINE DICARBOXYLATE

Scapin, G., Reddy, S.G., Zheng, R., Blanchard, J.S.

(1997) Biochemistry 36: 15081-15088

Released	1998-10-14
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Escherichia coli K-12
Macromolecule	DIHYDRODIPICOLINATE REDUCTASE (protein)
Unique Ligands	K, NAI, PDC, PO4

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1BDB \| pdb_00001bdb	Download File View File

CIS-BIPHENYL-2,3-DIHYDRODIOL-2,3-DEHYDROGENASE FROM PSEUDOMONAS SP. LB400

Huelsmeyer, M., Hecht, H.-J., Niefind, K., Hofer, B., Timmis, K.N., Schomburg, D.

(1998) Protein Sci 7: 1286-1293

Released	1997-11-12
Method	X-RAY DIFFRACTION 2 Å
Organisms	Pseudomonas sp.
Macromolecule	CIS-BIPHENYL-2,3-DIHYDRODIOL-2,3-DEHYDROGENASE (protein)
Unique Ligands	NAD

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1BUC \| pdb_00001buc	Download File View File

THREE-DIMENSIONAL STRUCTURE OF BUTYRYL-COA DEHYDROGENASE FROM MEGASPHAERA ELSDENII

Djordjevic, S., Pace, C.P., Stankovich, M.T., Kim, J.J.P.

(1995) Biochemistry 34: 2163-2171

Released	1995-04-20
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Megasphaera elsdenii
Macromolecule	BUTYRYL-COA DEHYDROGENASE (protein)
Unique Ligands	CAA, FAD

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1BVR \| pdb_00001bvr	Download File View File

M.TB. ENOYL-ACP REDUCTASE (INHA) IN COMPLEX WITH NAD+ AND C16-FATTY-ACYL-SUBSTRATE

Rozwarski, D.A., Vilcheze, C., Sugantino, M., Bittman, R., Jacobs, W., TB Structural Genomics Consortium (TBSGC)

(1999) J Biological Chem 274: 15582-15589

Released	1999-09-17
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	PROTEIN (ENOYL-ACYL CARRIER PROTEIN (ACP) REDUCTASE) (protein)
Unique Ligands	NAD, THT

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1C14 \| pdb_00001c14	Download File View File

CRYSTAL STRUCTURE OF E COLI ENOYL REDUCTASE-NAD+-TRICLOSAN COMPLEX

Qiu, X., Janson, C., Court, R., Smyth, M., Payne, D., Abdel-Meguid, S.

(1999) Protein Sci 8: 2529-2532

Released	2000-07-20
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli
Macromolecule	ENOYL REDUCTASE (protein)
Unique Ligands	NAD, TCL

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1C3V \| pdb_00001c3v	Download File View File

DIHYDRODIPICOLINATE REDUCTASE FROM MYCOBACTERIUM TUBERCULOSIS COMPLEXED WITH NADPH AND PDC

Cirilli, M., Zheng, R., Scapin, G., Blanchard, J.S., TB Structural Genomics Consortium (TBSGC)

(2003) Biochemistry 42: 10644-10650

Released	2003-08-26
Method	X-RAY DIFFRACTION 2.39 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	DIHYDRODIPICOLINATE REDUCTASE (protein)
Unique Ligands	NDP, PDC, PG4

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1CWU \| pdb_00001cwu	Download File View File

BRASSICA NAPUS ENOYL ACP REDUCTASE A138G MUTANT COMPLEXED WITH NAD+ AND THIENODIAZABORINE

Roujeinikova, A., Rafferty, J.B., Rice, D.W.

(1999) J Biological Chem 274: 30811-30817

Released	1999-09-02
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Brassica napus
Macromolecule	ENOYL ACP REDUCTASE (protein)
Unique Ligands	NAD, TDB

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1D3G \| pdb_00001d3g	Download File View File

HUMAN DIHYDROOROTATE DEHYDROGENASE COMPLEXED WITH BREQUINAR ANALOG

Liu, S., Neidhardt, E.A., Grossman, T.H., Ocain, T., Clardy, J.

(2000) Structure 8: 25-33

Released	2000-09-13
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	DIHYDROOROTATE DEHYDROGENASE (protein)
Unique Ligands	ACT, BRE, DDQ, FMN, ORO, SO4

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1D3H \| pdb_00001d3h	Download File View File

HUMAN DIHYDROOROTATE DEHYDROGENASE COMPLEXED WITH ANTIPROLIFERATIVE AGENT A771726

Liu, S., Neidhardt, E.A., Grossman, T.H., Ocain, T., Clardy, J.

(2000) Structure 8: 25-33

Released	2000-08-13
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	DIHYDROOROTATE DEHYDROGENASE (protein)
Unique Ligands	A26, ACT, FMN, ORO, SO4

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1D4C \| pdb_00001d4c	Download File View File

CRYSTAL STRUCTURE OF THE UNCOMPLEXED FORM OF THE FLAVOCYTOCHROME C FUMARATE REDUCTASE OF SHEWANELLA PUTREFACIENS STRAIN MR-1

Leys, D., Tsapin, A.S., Meyer, T.E., Cusanovich, M.A., Van Beeumen, J.J.

(1999) Nat Struct Biol 6: 1113-1117

Released	1999-12-01
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Shewanella oneidensis
Macromolecule	FLAVOCYTOCHROME C FUMARATE REDUCTASE (protein)
Unique Ligands	FAD, HEC, SO4

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1D4D \| pdb_00001d4d	Download File View File

CRYSTAL STRUCTURE OF THE SUCCINATE COMPLEXED FORM OF THE FLAVOCYTOCHROME C FUMARATE REDUCTASE OF SHEWANELLA PUTREFACIENS STRAIN MR-1

Leys, D., Tsapin, A.S., Meyer, T.E., Cusanovich, M.A., Van Beeumen, J.J.

(1999) Nat Struct Biol 6: 1113-1117

Released	1999-12-01
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Shewanella oneidensis
Macromolecule	FLAVOCYTOCHROME C FUMARATE REDUCTASE (protein)
Unique Ligands	FAD, HEC, SIN

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1D4E \| pdb_00001d4e	Download File View File

CRYSTAL STRUCTURE OF THE FLAVOCYTOCHROME C FUMARATE REDUCTASE OF SHEWANELLA PUTREFACIENS STRAIN MR-1 COMPLEXED WITH FUMARATE

Leys, D., Tsapin, A.S., Meyer, T.E., Cusanovich, M.A., Van Beeumen, J.J.

(1999) Nat Struct Biol 6: 1113-1117

Released	1999-12-01
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Shewanella oneidensis
Macromolecule	FLAVOCYTOCHROME C FUMARATE REDUCTASE (protein)
Unique Ligands	FAD, FUM, HEC

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1D7O \| pdb_00001d7o	Download File View File

CRYSTAL STRUCTURE OF BRASSICA NAPUS ENOYL ACYL CARRIER PROTEIN REDUCTASE COMPLEXED WITH NAD AND TRICLOSAN

Roujeinikova, A., Levy, C., Rowsell, S., Sedelnikova, S., Baker, P.J., Minshull, C.A., Mistry, A., Colls, J.G., Camble, R., Stuitje, A.R., Slabas, A.R., Rafferty, J.B., Pauptit, R.A., Viner, R., Rice, D.W.

(1999) J Mol Biology 294: 527-535

Released	1999-11-08
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Brassica napus
Macromolecule	ENOYL-[ACYL-CARRIER PROTEIN] REDUCTASE (NADH) PRECURSOR (protein)
Unique Ligands	NAD, TCL

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1D8A \| pdb_00001d8a	Download File View File

E. COLI ENOYL REDUCTASE/NAD+/TRICLOSAN COMPLEX

Levy, C.W., Roujeinikova, A., Sedelnikova, S., Baker, P.J., Stuitje, A.R., Slabas, A.R., Rice, D.W., Rafferty, J.B.

(1999) Nature 398: 383-384

Released	1999-10-28
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Escherichia coli
Macromolecule	ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE (protein)
Unique Ligands	NAD, TCL

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1DFG \| pdb_00001dfg	Download File View File

X-RAY STRUCTURE OF ESCHERICHIA COLI ENOYL REDUCTASE WITH BOUND NAD AND BENZO-DIAZABORINE

Baldock, C., Rafferty, J.B., Rice, D.W.

(1996) Science 274: 2107-2110

Released	1998-01-28
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Escherichia coli
Macromolecule	ENOYL ACYL CARRIER PROTEIN REDUCTASE (protein)
Unique Ligands	NAD, NDT

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1DFH \| pdb_00001dfh	Download File View File

X-RAY STRUCTURE OF ESCHERICHIA COLI ENOYL REDUCTASE WITH BOUND NAD AND THIENO-DIAZABORINE

Baldock, C., Rafferty, J.B., Rice, D.W.

(1996) Science 274: 2107-2110

Released	1998-01-28
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Escherichia coli
Macromolecule	ENOYL ACYL CARRIER PROTEIN REDUCTASE (protein)
Unique Ligands	NAD, TDB

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1DFI \| pdb_00001dfi	Download File View File

X-RAY STRUCTURE OF ESCHERICHIA COLI ENOYL REDUCTASE WITH BOUND NAD

Baldock, C., Rafferty, J.B., Rice, D.W.

(1996) Science 274: 2107-2110

Released	1998-01-28
Method	X-RAY DIFFRACTION 2.09 Å
Organisms	Escherichia coli
Macromolecule	ENOYL ACYL CARRIER PROTEIN REDUCTASE (protein)
Unique Ligands	NAD

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1DIH \| pdb_00001dih	Download File View File

THREE-DIMENSIONAL STRUCTURE OF E. COLI DIHYDRODIPICOLINATE REDUCTASE

Scapin, G., Blanchard, J.S., Sacchettini, J.C.

(1995) Biochemistry 34: 3502-3512

Released	1995-09-15
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Escherichia coli
Macromolecule	DIHYDRODIPICOLINATE REDUCTASE (protein)
Unique Ligands	NDP

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1DOR \| pdb_00001dor	Download File View File

DIHYDROOROTATE DEHYDROGENASE A FROM LACTOCOCCUS LACTIS

Rowland, P., Larsen, S.

(1997) Structure 5: 239-252

Released	1997-04-21
Method	X-RAY DIFFRACTION 2 Å
Organisms	Lactococcus lactis
Macromolecule	DIHYDROOROTATE DEHYDROGENASE A (protein)
Unique Ligands	FMN

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1DRU \| pdb_00001dru	Download File View File

ESCHERICHIA COLI DHPR/NADH COMPLEX

Reddy, S.G., Scapin, G., Blanchard, J.S.

(1996) Biochemistry 35: 13294-13302

Released	1997-01-27
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Escherichia coli
Macromolecule	DIHYDRODIPICOLINATE REDUCTASE (protein)
Unique Ligands	NAD

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1DRV \| pdb_00001drv	Download File View File

ESCHERICHIA COLI DHPR/ACNADH COMPLEX

Reddy, S.G., Scapin, G., Blanchard, J.S.

(1996) Biochemistry 35: 13294-13302

Released	1997-01-27
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Escherichia coli
Macromolecule	DIHYDRODIPICOLINATE REDUCTASE (protein)
Unique Ligands	A3D

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1DRW \| pdb_00001drw	Download File View File

ESCHERICHIA COLI DHPR/NHDH COMPLEX

Reddy, S.G., Scapin, G., Blanchard, J.S.

(1996) Biochemistry 35: 13294-13302

Released	1997-01-27
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Escherichia coli
Macromolecule	DIHYDRODIPICOLINATE REDUCTASE (protein)
Unique Ligands	NHD

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1E39 \| pdb_00001e39	Download File View File

Flavocytochrome C3 from Shewanella frigidimarina histidine 365 mutated to alanine

Doherty, M.K., Pealing, S.L., Miles, C.S., Moysey, R., Taylor, P., Walkinshaw, M.D., Reid, G.A., Chapman, S.K.

(2000) Biochemistry 39: 10695

Released	2000-09-18
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Shewanella frigidimarina
Macromolecule	FUMARATE REDUCTASE FLAVOPROTEIN SUBUNIT (protein)
Unique Ligands	FAD, FUM, GOL, HEC, NA

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1E7P \| pdb_00001e7p	Download File View File

QUINOL:FUMARATE REDUCTASE FROM WOLINELLA SUCCINOGENES

Lancaster, C.R.D., Kroeger, A.

(2001) Eur J Biochem 268: 1820

Released	2001-04-09
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Wolinella succinogenes
Macromolecule	Fumarate reductase cytochrome b subunit (protein) Fumarate reductase flavoprotein subunit (protein) Fumarate reductase iron-sulfur subunit (protein)
Unique Ligands	F3S, FAD, FES, HEM, LMT, MLA, NA, SF4