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235,183 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Walker, M."

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Search Summary

This query matches 117 Structures.

Refinements

Structure Determination Methodology

experimental (117)

Scientific Name of Source Organism

	Mus musculus (36)
	Artocarpus integer (15)
	Psophocarpus tetragonolobus (14)
	Mycobacterium tuberculosis H37Rv (11)
	Yarrowia lipolytica (6)
	Tetrahymena thermophila SB210 (5)
	Acanthamoeba castellanii str. Neff (4)
	Homo sapiens (4)
	Severe acute respiratory syndrome coronavirus 2 (4)
	Naegleria fowleri (3)

More...

Taxonomy

	Eukaryota (94)
	Bacteria (18)
	Riboviria (5)

Experimental Method

	X-RAY DIFFRACTION (68)
	ELECTRON MICROSCOPY (48)
	SOLUTION NMR (1)

Polymer Entity Type

Protein (117)

Refinement Resolution (Å)

	1.0 - 1.5 (5)
	1.5 - 2.0 (17)
	2.0 - 2.5 (23)
	2.5 - 3.0 (27)
	3.0 - 3.5 (23)
	3.5 - 4.0 (11)
	4.0 - 4.5 (9)
	> 4.5 (1)

Release Date

	1995 - 1999 (7)
	2000 - 2004 (18)
	2005 - 2009 (14)
	2010 - 2014 (1)
	2015 - 2019 (9)
	2020 - 2024 (68)

Enzyme Classification Name

	Translocases (47)
	Oxidoreductases (13)
	Transferases (13)
	Hydrolases (9)
	Lyases (3)
	Ligases (1)

Membrane Protein Annotation

	PDBTM (34)
	mpstruc (8)
	OPM (9)
	MemProtMD (1)

Symmetry Type

	Asymmetric (68)
	Cyclic (45)
	Dihedral (23)

SCOP Classification

	All beta proteins (24)
	Alpha and beta proteins (a/b) (12)
	Alpha and beta proteins (a+b) (8)
	All alpha proteins (6)
	Artifacts (5)

AllSelected

1 to 25 of 117 Structures

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1F61 \| pdb_00001f61	Download File View File

CRYSTAL STRUCTURE OF ISOCITRATE LYASE FROM MYCOBACTERIUM TUBERCULOSIS

Sharma, V., Sharma, S., Hoener zu Bentrup, K.H., McKinney, J.D., Russell, D.G., Jacobs Jr., W.R., Sacchettini, J.C., TB Structural Genomics Consortium (TBSGC)

(2000) Nat Struct Biol 7: 663-668

Released	2000-08-30
Method	X-RAY DIFFRACTION 2 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	ISOCITRATE LYASE (protein)
Unique Ligands	MG

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1F8I \| pdb_00001f8i	Download File View File

CRYSTAL STRUCTURE OF ISOCITRATE LYASE:NITROPROPIONATE:GLYOXYLATE COMPLEX FROM MYCOBACTERIUM TUBERCULOSIS

Sharma, V., Sharma, S., Hoener zu Bentrup, K., McKinney, J.D., Russell, D.G., Jacobs Jr., W.R., Sacchettini, J.C., TB Structural Genomics Consortium (TBSGC)

(2000) Nat Struct Biol 7: 663-668

Released	2000-12-30
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	ISOCITRATE LYASE (protein)
Unique Ligands	GLV, MG, SIN

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1F8M \| pdb_00001f8m	Download File View File

CRYSTAL STRUCTURE OF 3-BROMOPYRUVATE MODIFIED ISOCITRATE LYASE (ICL) FROM MYCOBACTERIUM TUBERCULOSIS

Sharma, V., Sharma, S., Hoener zu Bentrup, K., McKinney, J.D., Russell, D.G., Jacobs Jr., W.R., Sacchettini, J.C., TB Structural Genomics Consortium (TBSGC)

(2000) Nat Struct Biol 7: 663-668

Released	2000-12-30
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	ISOCITRATE LYASE (protein)
Unique Ligands	MG, PYR

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1F9B \| pdb_00001f9b	Download File View File

MELANIN PROTEIN INTERACTION: X-RAY STRUCTURE OF THE COMPLEX OF MARE LACTOFERRIN WITH MELANIN MONOMERS

Kumar, S., Singh, T.P., Sharma, A.K., Singh, N., Raman, G.

(2001) Proteins 45: 229-236

Released	2001-02-10
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Equus caballus
Macromolecule	LACTOTRANSFERRIN (protein)
Unique Ligands	3ID, BCT, FE

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1G5Z \| pdb_00001g5z	Download File View File

CRYSTAL STRUCTURE OF LYME DISEASE ANTIGEN OUTER SURFACE PROTEIN C (OSPC) FROM BORRELIA BURGDORFERI STRAIN N40

Eicken, C., Sharma, V., Klabunde, T., Owens, R.T., Pikas, D.S., Hook, M., Sacchettini, J.C.

(2001) J Biological Chem 276: 10010-10015

Released	2001-04-04
Method	X-RAY DIFFRACTION 2.51 Å
Organisms	Borreliella burgdorferi
Macromolecule	OUTER SURFACE PROTEIN C (protein)

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1JAC \| pdb_00001jac	Download File View File

A NOVEL MODE OF CARBOHYDRATE RECOGNITION IN JACALIN, A MORACEAE PLANT LECTIN WITH A BETA-PRISM

Sankaranarayanan, R., Sekar, K., Banerjee, R., Sharma, V., Surolia, A., Vijayan, M.

(1996) Nat Struct Biol 3: 596-603

Released	1997-06-05
Method	X-RAY DIFFRACTION 2.43 Å
Organisms	Artocarpus heterophyllus
Macromolecule	JACALIN (protein)
Unique Ligands	AMG

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1L8W \| pdb_00001l8w	Download File View File

Crystal Structure of Lyme Disease Variable Surface Antigen VlsE of Borrelia burgdorferi

Eicken, C., Sharma, V., Klabunde, T., Lawrenz, M.B., Hardham, J.M., Norris, S.J., Sacchettini, J.C.

(2002) J Biological Chem 277: 21691-21696

Released	2002-06-19
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Borreliella burgdorferi
Macromolecule	VlsE1 (protein)

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1M26 \| pdb_00001m26	Download File View File

Crystal structure of jacalin-T-antigen complex

Jeyaprakash, A.A., Rani, P.G., Reddy, G.B., Banumathi, S., Betzel, C., Surolia, A., Vijayan, M.

(2002) J Mol Biology 321: 637-645

Released	2002-10-12
Method	X-RAY DIFFRACTION 1.62 Å
Organisms	Artocarpus integer
Macromolecule	Jacalin, alpha chain (protein) Jacalin, beta chain (protein)
Unique branched monosaccharides	A2G, GAL

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1NH7 \| pdb_00001nh7	Download File View File

ATP PHOSPHORIBOSYLTRANSFERASE (ATP-PRTASE) FROM MYCOBACTERIUM TUBERCULOSIS

Cho, Y., Sharma, V., Sacchettini, J.C., TB Structural Genomics Consortium (TBSGC)

(2003) J Biological Chem 278: 8333

Released	2003-02-11
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	ATP Phosphoribosyltransferase (protein)
Unique Ligands	MG, SO4

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1NH8 \| pdb_00001nh8	Download File View File

ATP PHOSPHORIBOSYLTRANSFERASE (ATP-PRTASE) FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH AMP AND HISTIDINE

Cho, Y., Sharma, V., Sacchettini, J.C., TB Structural Genomics Consortium (TBSGC)

(2003) J Biological Chem 278: 8333

Released	2003-02-11
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	ATP Phosphoribosyltransferase (protein)
Unique Ligands	AMP, HIS, SO4

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1NKT \| pdb_00001nkt	Download File View File

CRYSTAL STRUCTURE OF THE SECA PROTEIN TRANSLOCATION ATPASE FROM MYCOBACTERIUM TUBERCULOSIS COMPLEX WITH ADPBS

Sharma, V., Arockiasamy, A., Ronning, D.R., Savva, C.G., Holzenburg, A., Braunstein, M., Jacobs Jr., W.R., Sacchettini, J.C., TB Structural Genomics Consortium (TBSGC)

(2003) Proc Natl Acad Sci U S A 100: 2243-2248

Released	2003-03-04
Method	X-RAY DIFFRACTION 2.601 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	Preprotein translocase secA 1 subunit (protein)
Unique Ligands	ADP, MG

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1NL3 \| pdb_00001nl3	Download File View File

CRYSTAL STRUCTURE OF THE SECA PROTEIN TRANSLOCATION ATPASE FROM MYCOBACTERIUM TUBERCULOSIS in APO FORM

Sharma, V., Arockiasamy, A., Ronning, D.R., Savva, C.G., Holzenburg, A., Braunstein, M., Jacobs Jr., W.R., Sacchettini, J.C., TB Structural Genomics Consortium (TBSGC)

(2003) Proc Natl Acad Sci U S A 100: 2243-2248

Released	2003-03-04
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	PREPROTEIN TRANSLOCASE SECA 1 SUBUNIT (protein)

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1QPN \| pdb_00001qpn	Download File View File

Quinolinate Phosphoribosyl Transferase from Mycobacterium Tuberculosis in Complex with NCNN

Sharma, V., Grubmeyer, C., Sacchettini, J.C., TB Structural Genomics Consortium (TBSGC)

(1998) Structure 6: 1587-1599

Released	1998-11-25
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	PROTEIN (QUINOLINATE PHOSPHORIBOSYL TRANSFERASE) (protein)
Unique Ligands	NCN

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1QPO \| pdb_00001qpo	Download File View File

Quinolinate Phosphoribosyl Transferase (QAPRTase) Apo-Enzyme from Mycobacterium Tuberculosis

Sharma, V., Grubmeyer, C., Sacchettini, J.C., TB Structural Genomics Consortium (TBSGC)

(1998) Structure 6: 1587-1599

Released	1998-11-24
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	QUINOLINATE ACID PHOSPHORIBOSYL TRANSFERASE (protein)
Unique Ligands	SO4

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1QPQ \| pdb_00001qpq	Download File View File

Structure of Quinolinic Acid Phosphoribosyltransferase from Mycobacterium Tuberculosis: A Potential TB Drug Target

Sharma, V., Grubmeyer, C., Sacchettini, J.C., TB Structural Genomics Consortium (TBSGC)

(1998) Structure 6: 1587-1599

Released	1998-11-25
Method	X-RAY DIFFRACTION 2.45 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	QUINOLINATE PHOSPHORIBOSYLTRANSFERASE (protein)
Unique Ligands	NTM, SO4

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1QPR \| pdb_00001qpr	Download File View File

QUINOLINATE PHOSPHORIBOSYLTRANSFERASE (QAPRTASE) FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH PHTHALATE AND PRPCP

Sharma, V., Grubmeyer, C., Sacchettini, J.C., TB Structural Genomics Consortium (TBSGC)

(1998) Structure 6: 1587-1599

Released	1998-10-21
Method	X-RAY DIFFRACTION 2.45 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	QUINOLINIC ACID PHOSPHORIBOSYLTRANSFERASE (protein)
Unique Ligands	MN, PHT, PPC

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1UGW \| pdb_00001ugw	Download File View File

Crystal structure of jacalin- Gal complex

Jeyaprakash, A.A., Katiyar, S., Swaminathan, C.P., Sekar, K., Surolia, A., Vijayan, M.

(2003) J Mol Biology 332: 217-228

Released	2003-09-23
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Artocarpus integer
Macromolecule	Agglutinin alpha chain (protein) Agglutinin alpha-chain (protein) Agglutinin beta-3 chain (protein)
Unique Ligands	GAL

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1UGX \| pdb_00001ugx	Download File View File

Crystal structure of jacalin- Me-alpha-T-antigen (Gal-beta(1-3)-GalNAc-alpha-o-Me) complex

Jeyaprakash, A.A., Katiyar, S., Swaminathan, C.P., Sekar, K., Surolia, A., Vijayan, M.

(2003) J Mol Biology 332: 217-228

Released	2003-09-23
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Artocarpus integer
Macromolecule	Agglutinin alpha chain (protein) Agglutinin beta-3 chain (protein)
Unique branched monosaccharides	GAL, MGC

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1UGY \| pdb_00001ugy	Download File View File

Crystal structure of jacalin- mellibiose (Gal-alpha(1-6)-Glc) complex

Jeyaprakash, A.A., Katiyar, S., Swaminathan, C.P., Sekar, K., Surolia, A., Vijayan, M.

(2003) J Mol Biology 332: 217-228

Released	2003-09-23
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Artocarpus integer
Macromolecule	Agglutinin alpha chain (protein) Agglutinin beta-3 chain (protein)
Unique branched monosaccharides	BGC, GLA, GLC

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1UH0 \| pdb_00001uh0	Download File View File

Crystal structure of jacalin- Me-alpha-GalNAc complex

Jeyaprakash, A.A., Katiyar, S., Swaminathan, C.P., Sekar, K., Surolia, A., Vijayan, M.

(2003) J Mol Biology 332: 217-228

Released	2003-09-23
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Artocarpus integer
Macromolecule	Agglutinin alpha chain (protein) Agglutinin beta-3 chain (protein)
Unique Ligands	MGC

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1UH1 \| pdb_00001uh1	Download File View File

Crystal structure of jacalin- GalNAc-beta(1-3)-Gal-alpha-O-Me complex

Jeyaprakash, A.A., Katiyar, S., Swaminathan, C.P., Sekar, K., Surolia, A., Vijayan, M.

(2003) J Mol Biology 332: 217-228

Released	2003-09-23
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Artocarpus integer
Macromolecule	Agglutinin alpha chain (protein) Agglutinin beta-3 chain (protein)
Unique Ligands	MGC
Unique branched monosaccharides	AMG, NGA

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1VBO \| pdb_00001vbo	Download File View File

Crystal structure of artocarpin-mannotriose complex

Jeyaprakash, A.A., Srivastav, A., Surolia, A., Vijayan, M.

(2004) J Mol Biology 338: 757-770

Released	2004-06-15
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Artocarpus integer
Macromolecule	artocarpin (protein)
Unique Ligands	MAN
Unique branched monosaccharides	MAN

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1VBP \| pdb_00001vbp	Download File View File

Crystal structure of artocarpin-mannopentose complex

Jeyaprakash, A.A., Srivastav, A., Surolia, A., Vijayan, M.

(2004) J Mol Biology 338: 757-770

Released	2004-06-15
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Artocarpus integer
Macromolecule	artocarpin (protein)
Unique Ligands	SO4
Unique branched monosaccharides	MAN

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1WBF \| pdb_00001wbf	Download File View File

WINGED BEAN LECTIN, SACCHARIDE FREE FORM

Manoj, N., Srinivas, V.R., Suguna, K.

(1999) Acta Crystallogr D Biol Crystallogr 55: 794-800

Released	1999-12-22
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Psophocarpus tetragonolobus
Macromolecule	PROTEIN (AGGLUTININ) (protein)
Unique Ligands	CA, MN, NAG

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1WBL \| pdb_00001wbl	Download File View File

WINGED BEAN LECTIN COMPLEXED WITH METHYL-ALPHA-D-GALACTOSE

Prabu, M.M., Sankaranarayanan, R., Puri, K.D., Sharma, V., Surolia, A., Vijayan, M., Suguna, K.

(1998) J Mol Biology 276: 787-796

Released	1998-04-08
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Psophocarpus tetragonolobus
Macromolecule	WINGED BEAN LECTIN (protein)
Unique Ligands	AMG, CA, MN
Unique branched monosaccharides	FUC, NAG

1 to 25 of 117 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1F61 | pdb_00001f61

1F8I | pdb_00001f8i

1F8M | pdb_00001f8m

1F9B | pdb_00001f9b

1G5Z | pdb_00001g5z

1JAC | pdb_00001jac

1L8W | pdb_00001l8w

1M26 | pdb_00001m26

1NH7 | pdb_00001nh7

1NH8 | pdb_00001nh8

1NKT | pdb_00001nkt

1NL3 | pdb_00001nl3

1QPN | pdb_00001qpn

1QPO | pdb_00001qpo

1QPQ | pdb_00001qpq

1QPR | pdb_00001qpr

1UGW | pdb_00001ugw

1UGX | pdb_00001ugx

1UGY | pdb_00001ugy

1UH0 | pdb_00001uh0

1UH1 | pdb_00001uh1

1VBO | pdb_00001vbo

1VBP | pdb_00001vbp

1WBF | pdb_00001wbf

1WBL | pdb_00001wbl