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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Ueki, T."

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Search Summary

This query matches 24 Structures.

Refinements

Structure Determination Methodology

experimental (24)

Scientific Name of Source Organism

	Bos taurus (7)
	Aspergillus terreus (6)
	Thermus thermophilus HB8 (4)
	Mus musculus (2)
	Agrobacterium sp. KNK712 (1)
	Ascidia sydneiensis samea (1)
	Katsuwonus pelamis (1)
	Porphyridium purpureum (1)
	Protobothrops flavoviridis (1)

Taxonomy

	Eukaryota (19)
	Bacteria (5)

Experimental Method

	X-RAY DIFFRACTION (23)
	SOLUTION NMR (1)

Polymer Entity Type

Protein (24)

Refinement Resolution (Å)

	1.0 - 1.5 (5)
	1.5 - 2.0 (10)
	2.0 - 2.5 (8)

Release Date

	1975 - 1979 (1)
	1995 - 1999 (4)
	2000 - 2004 (10)
	2005 - 2009 (9)

Enzyme Classification Name

	Hydrolases (17)
	Lyases (8)
	Oxidoreductases (5)

Symmetry Type

	Asymmetric (12)
	Dihedral (7)
	Cyclic (5)

SCOP Classification

	Alpha and beta proteins (a/b) (13)
	Alpha and beta proteins (a+b) (9)
	All alpha proteins (1)
	Artifacts (1)
	Small proteins (1)

AllSelected

1 to 24 of 24 Structures

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1CYC \| pdb_00001cyc	Download File View File

THE CRYSTAL STRUCTURE OF BONITO (KATSUO) FERROCYTOCHROME C AT 2.3 ANGSTROMS RESOLUTION. II. STRUCTURE AND FUNCTION

Tanaka, N., Yamane, T., Tsukihara, T., Ashida, T., Kakudo, M.

(1975) J Biochem 77: 147-162

Released	1976-10-06
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Katsuwonus pelamis
Macromolecule	FERROCYTOCHROME C (protein)
Unique Ligands	HEC

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1DDZ \| pdb_00001ddz	Download File View File

X-RAY STRUCTURE OF A BETA-CARBONIC ANHYDRASE FROM THE RED ALGA, PORPHYRIDIUM PURPUREUM R-1

Mitsuhashi, S., Mizushima, T., Yamashita, E., Miyachi, S., Tsukihara, T.

(2000) J Biological Chem 275: 5521-5526

Released	2000-03-08
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Porphyridium purpureum
Macromolecule	CARBONIC ANHYDRASE (protein)
Unique Ligands	ZN

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1EIC \| pdb_00001eic	Download File View File

CRYSTAL STRUCTURE OF F120A MUTANT OF BOVINE PANCREATIC RIBONUCLEASE A

Chatani, E., Hayashi, R., Moriyama, H., Ueki, T.

(2002) Protein Sci 11: 72-81

Released	2002-02-13
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Bos taurus
Macromolecule	RIBONUCLEASE A (protein)

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1EID \| pdb_00001eid	Download File View File

CRYSTAL STRUCTURE OF F120G MUTANT OF BOVINE PANCREATIC RIBONUCLEASE A

Chatani, E., Hayashi, R., Moriyama, H., Ueki, T.

(2002) Protein Sci 11: 72-81

Released	2002-02-13
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Bos taurus
Macromolecule	RIBONUCLEASE A (protein)

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1EIE \| pdb_00001eie	Download File View File

CRYSTAL STRUCTURE OF F120W MUTANT OF BOVINE PANCREATIC RIBONUCLEASE A

Chatani, E., Hayashi, R., Moriyama, H., Ueki, T.

(2002) Protein Sci 11: 72-81

Released	2002-02-13
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Bos taurus
Macromolecule	RIBONUCLEASE A (protein)

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1ERZ \| pdb_00001erz	Download File View File

CRYSTAL STRUCTURE OF N-CARBAMYL-D-AMINO ACID AMIDOHYDROLASE WITH A NOVEL CATALYTIC FRAMEWORK COMMON TO AMIDOHYDROLASES

Nakai, T., Hasegawa, T., Yamashita, E., Yamamoto, M., Kumasaka, T., Ueki, T., Nanba, H., Ikenaka, Y., Takahashi, S., Sato, M., Tsukihara, T.

(2000) Structure 8: 729-737

Released	2001-04-06
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Agrobacterium sp. KNK712
Macromolecule	N-CARBAMYL-D-AMINO ACID AMIDOHYDROLASE (protein)

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1FS3 \| pdb_00001fs3	Download File View File

CRYSTAL STRUCTURE OF WILD-TYPE BOVINE PANCREATIC RIBONUCLEASE A

Chatani, E., Hayashi, R., Moriyama, H., Ueki, T.

(2002) Protein Sci 11: 72-81

Released	2002-02-13
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Bos taurus
Macromolecule	Ribonuclease A (protein)

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1IZP \| pdb_00001izp	Download File View File

F46L mutant of bovine pancreatic ribonuclease A

Kadonosono, T., Chatani, E., Hayashi, R., Moriyama, H., Ueki, T.

(2003) Biochemistry 42: 10651-10658

Released	2003-11-25
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Bos taurus
Macromolecule	RIBONUCLEASE A (protein)

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1IZQ \| pdb_00001izq	Download File View File

F46V mutant of bovine pancreatic ribonuclease A

Kadonosono, T., Chatani, E., Hayashi, R., Moriyama, H., Ueki, T.

(2003) Biochemistry 42: 10651-10658

Released	2003-11-25
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Bos taurus
Macromolecule	RIBONUCLEASE A (protein)

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1IZR \| pdb_00001izr	Download File View File

F46A mutant of bovine pancreatic ribonuclease A

Kadonosono, T., Chatani, E., Hayashi, R., Moriyama, H., Ueki, T.

(2003) Biochemistry 42: 10651-10658

Released	2003-11-25
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Bos taurus
Macromolecule	RIBONUCLEASE A (protein)

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1VFI \| pdb_00001vfi	Download File View File

Solution Structure of Vanabin2 (RUH-017), a Vanadium-binding Protein from Ascidia sydneiensis samea

Hamada, T., Hirota, H., Asanuma, M., Hayashi, F., Kobayashi, N., Ueki, T., Michibata, H., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

(2005) J Am Chem Soc 127: 4216-4222

Released	2005-03-22
Method	SOLUTION NMR
Organisms	Ascidia sydneiensis samea
Macromolecule	vanadium-binding protein 2 (protein)

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1WN5 \| pdb_00001wn5	Download File View File

Crystal Structure of Blasticidin S Deaminase (BSD) Complexed with Cacodylic Acid

Kumasaka, T., Yamamoto, M., Furuichi, M., Nakasako, M., Kimura, M., Yamaguchi, I., Ueki, T.

(2007) J Biological Chem 282: 37103-37111

Released	2005-10-25
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Aspergillus terreus
Macromolecule	Blasticidin-S deaminase (protein)
Unique Ligands	CAC, ZN

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1WN6 \| pdb_00001wn6	Download File View File

Crystal Structure of Blasticidin S Deaminase (BSD) Complexed with Tetrahedral Intermediate of Blasticidin S

Kumasaka, T., Yamamoto, M., Furuichi, M., Nakasako, M., Kimura, M., Yamaguchi, I., Ueki, T.

(2007) J Biological Chem 282: 37103-37111

Released	2005-10-25
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Aspergillus terreus
Macromolecule	Blasticidin-S deaminase (protein)
Unique Ligands	ARS, BST, ZN

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1WNI \| pdb_00001wni	Download File View File

Crystal Structure of H2-Proteinase

Kumasaka, T., Yamamoto, M., Moriyama, H., Tanaka, N., Sato, M., Katsube, Y., Yamakawa, Y., Omori-Satoh, T., Iwanaga, S., Ueki, T.

(1996) J Biochem 119: 49-57

Released	2004-08-17
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Protobothrops flavoviridis
Macromolecule	Trimerelysin II (protein)
Unique Ligands	ZN

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1X1R \| pdb_00001x1r	Download File View File

Crystal structure of M-Ras in complex with GDP

Ye, M., Shima, F., Muraoka, S., Liao, J., Okamoto, H., Yamamoto, M., Tamura, A., Yagi, N., Ueki, T., Kataoka, T.

(2005) J Biological Chem 280: 31267-31275

Released	2005-07-26
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Mus musculus
Macromolecule	Ras-related protein M-Ras (protein)
Unique Ligands	GDP, MG

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1X1S \| pdb_00001x1s	Download File View File

Crystal structure of M-Ras in complex with GppNHp

Ye, M., Shima, F., Muraoka, S., Liao, J., Okamoto, H., Yamamoto, M., Tamura, A., Yagi, N., Ueki, T., Kataoka, T.

(2005) J Biological Chem 280: 31267-31275

Released	2005-07-26
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Mus musculus
Macromolecule	Ras-related protein M-Ras (protein)
Unique Ligands	GNP, MG

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1XAA \| pdb_00001xaa	Download File View File

3-ISOPROPYLMALATE DEHYDROGENASE, LOW TEMPERATURE (100K) STRUCTURE

Nagata, C., Moriyama, H., Tanaka, N.

(1996) Acta Crystallogr D Biol Crystallogr 52: 623-630

Released	1996-04-03
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Thermus thermophilus HB8
Macromolecule	3-ISOPROPYLMALATE DEHYDROGENASE (protein)

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1XAB \| pdb_00001xab	Download File View File

3-ISOPROPYLMALATE DEHYDROGENASE, LOW TEMPERATURE (150K) STRUCTURE

Nagata, C., Moriyama, H., Tanaka, N.

(1996) Acta Crystallogr D Biol Crystallogr 52: 623-630

Released	1996-04-03
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Thermus thermophilus HB8
Macromolecule	3-ISOPROPYLMALATE DEHYDROGENASE (protein)

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1XAC \| pdb_00001xac	Download File View File

CHIMERA ISOPROPYLMALATE DEHYDROGENASE BETWEEN BACILLUS SUBTILIS (M) AND THERMUS THERMOPHILUS (T) FROM N-TERMINAL: 20% T MIDDLE 20% M RESIDUAL 60% T, MUTATED AT S82R. LOW TEMPERATURE (100K) STRUCTURE.

Nagata, C., Moriyama, H., Tanaka, N.

(1996) Acta Crystallogr D Biol Crystallogr 52: 623-630

Released	1996-04-03
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Thermus thermophilus HB8
Macromolecule	3-ISOPROPYLMALATE DEHYDROGENASE 2T2M6T S82R (protein)

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1XAD \| pdb_00001xad	Download File View File

CHIMERA ISOPROPYLMALATE DEHYDROGENASE BETWEEN BACILLUS SUBTILIS (M) AND THERMUS THERMOPHILUS (T) FROM N-TERMINAL: 20% T MIDDLE 20% M RESIDUAL 60% T, MUTATED AT S82R. LOW TEMPERATURE (150K) STRUCTURE.

Nagata, C., Moriyama, H., Tanaka, N.

(1996) Acta Crystallogr D Biol Crystallogr 52: 623-630

Released	1996-04-03
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Thermus thermophilus HB8
Macromolecule	3-ISOPROPYLMALATE DEHYDROGENASE 2T2M6T S82R (protein)

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2Z3G \| pdb_00002z3g	Download File View File

Crystal structure of blasticidin S deaminase (BSD)

Kumasaka, T., Yamamoto, M., Furuichi, M., Nakasako, M., Kimura, M., Yamaguchi, I., Ueki, T.

(2007) J Biological Chem 282: 37103-37111

Released	2007-10-23
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Aspergillus terreus
Macromolecule	Blasticidin-S deaminase (protein)
Unique Ligands	ZN
Unique branched monosaccharides	GLC