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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Palde, P.B."

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Search Summary

This query matches 16 Structures.

Refinements

Structure Determination Methodology

experimental (16)

Scientific Name of Source Organism

	Homo sapiens (16)
	synthetic construct (2)

Taxonomy

	Eukaryota (16)
	other sequences (2)

Experimental Method

X-RAY DIFFRACTION (16)

Polymer Entity Type

Protein (16)

Refinement Resolution (Å)

	1.0 - 1.5 (3)
	1.5 - 2.0 (8)
	2.0 - 2.5 (5)

Release Date

2020 - 2024 (16)

Enzyme Classification Name

Transferases (16)

Symmetry Type

Asymmetric (16)

SCOP Classification

	Alpha and beta proteins (a+b) (9)
	All alpha proteins (5)
	Artifacts (4)

AllSelected

1 to 16 of 16 Structures

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6WF3 \| pdb_00006wf3	Download File View File

Crystal structure of human Naa50 in complex with a cofactor derived inhibitor (compound 1)

Greasley, S.E., Feng, J., Deng, Y.-L., Stewart, A.E.

(2020) ACS Med Chem Lett 11: 1175-1184

Released	2020-07-01
Method	X-RAY DIFFRACTION 2.291 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	ACE-MET-LEU-GLY-PRO-NH2 (protein) N-alpha-acetyltransferase 50 (protein)
Unique Ligands	COA

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6WF5 \| pdb_00006wf5	Download File View File

Crystal structure of human Naa50 in complex with a truncated cofactor derived inhibitor (compound 2)

Greasley, S.E., Feng, J., Deng, Y.-L., Stewart, A.E.

(2020) ACS Med Chem Lett 11: 1175-1184

Released	2020-07-01
Method	X-RAY DIFFRACTION 2.04 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	ACE-MET-LEU-GLY-PRO-NH2 (protein) N-alpha-acetyltransferase 50 (protein)
Unique Ligands	U44

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6WFG \| pdb_00006wfg	Download File View File

Crystal structure of human Naa50 in complex with an inhibitor (compound 3) identified using DNA encoded library technology

Greasley, S.E., Feng, J., Deng, Y.-L., Stewart, A.E.

(2020) ACS Med Chem Lett 11: 1175-1184

Released	2020-07-01
Method	X-RAY DIFFRACTION 2.16 Å
Organisms	Homo sapiens
Macromolecule	N-alpha-acetyltransferase 50 (protein)
Unique Ligands	COA, U3V

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6WFK \| pdb_00006wfk	Download File View File

Crystal structure of human Naa50 in complex with CoA and an inhibitor (compound 4a) identified using DNA encoded library technology

Greasley, S.E., Feng, J., Deng, Y.-L., Stewart, A.E.

(2020) ACS Med Chem Lett 11: 1175-1184

Released	2020-07-01
Method	X-RAY DIFFRACTION 1.87 Å
Organisms	Homo sapiens
Macromolecule	N-alpha-acetyltransferase 50 (protein)
Unique Ligands	COA, U2J

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6WFN \| pdb_00006wfn	Download File View File

Crystal structure of human Naa50 in complex with AcCoA and an inhibitor (compound 4a) identified using DNA encoded library technology

Greasley, S.E., Feng, J., Deng, Y.-L., Stewart, A.E.

(2020) ACS Med Chem Lett 11: 1175-1184

Released	2020-07-01
Method	X-RAY DIFFRACTION 1.07 Å
Organisms	Homo sapiens
Macromolecule	N-alpha-acetyltransferase 50 (protein)
Unique Ligands	ACO, U2J

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6WFO \| pdb_00006wfo	Download File View File

Crystal structure of human Naa50 in complex with AcCoA and an inhibitor (compound 4b) identified using DNA encoded library technology

Greasley, S.E., Feng, J., Deng, Y.-L., Stewart, A.E.

(2020) ACS Med Chem Lett 11: 1175-1184

Released	2020-07-01
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Homo sapiens
Macromolecule	N-alpha-acetyltransferase 50 (protein)
Unique Ligands	ACO, U3Y

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7KK2 \| pdb_00007kk2	Download File View File

Structure of the catalytic domain of PARP1

Gajiwala, K.S., Ryan, K.

(2021) J Biological Chem 296: 100251-100251

Released	2021-01-06
Method	X-RAY DIFFRACTION 1.695 Å
Organisms	Homo sapiens
Macromolecule	Poly [ADP-ribose] polymerase 1 (protein)
Unique Ligands	SO4

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7KK3 \| pdb_00007kk3	Download File View File

Structure of the catalytic domain of PARP1 in complex with talazoparib

Gajiwala, K.S., Ryan, K.

(2021) J Biological Chem 296: 100251-100251

Released	2021-01-06
Method	X-RAY DIFFRACTION 2.06 Å
Organisms	Homo sapiens
Macromolecule	Poly [ADP-ribose] polymerase 1 (protein)
Unique Ligands	2YQ

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7KK4 \| pdb_00007kk4	Download File View File

Structure of the catalytic domain of PARP1 in complex with olaparib

Gajiwala, K.S., Ryan, K.

(2021) J Biological Chem 296: 100251-100251

Released	2021-01-06
Method	X-RAY DIFFRACTION 1.96 Å
Organisms	Homo sapiens
Macromolecule	Poly [ADP-ribose] polymerase 1 (protein)
Unique Ligands	09L

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7KK5 \| pdb_00007kk5	Download File View File

Structure of the catalytic domain of PARP1 in complex with niraparib

Gajiwala, K.S., Ryan, K.

(2021) J Biological Chem 296: 100251-100251

Released	2021-01-06
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	Poly [ADP-ribose] polymerase 1 (protein)
Unique Ligands	3JD, SO4

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7KK6 \| pdb_00007kk6	Download File View File

Structure of the catalytic domain of PARP1 in complex with veliparib

Gajiwala, K.S., Ryan, K.

(2021) J Biological Chem 296: 100251-100251

Released	2021-01-06
Method	X-RAY DIFFRACTION 2.06 Å
Organisms	Homo sapiens
Macromolecule	Poly [ADP-ribose] polymerase 1 (protein)
Unique Ligands	78P, SO4

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7KKM \| pdb_00007kkm	Download File View File

Structure of the catalytic domain of tankyrase 1

Gajiwala, K.S., Ryan, K.

(2021) J Biological Chem 296: 100251-100251

Released	2021-01-06
Method	X-RAY DIFFRACTION 1.58 Å
Organisms	Homo sapiens
Macromolecule	Poly [ADP-ribose] polymerase (protein)
Unique Ligands	ZN

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7KKN \| pdb_00007kkn	Download File View File

Structure of the catalytic domain of tankyrase 1 in complex with talazoparib

Gajiwala, K.S., Ryan, K.

(2021) J Biological Chem 296: 100251-100251

Released	2021-01-06
Method	X-RAY DIFFRACTION 1.48 Å
Organisms	Homo sapiens
Macromolecule	Poly [ADP-ribose] polymerase (protein)
Unique Ligands	2YQ, MES, ZN

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7KKO \| pdb_00007kko	Download File View File

Structure of the catalytic domain of tankyrase 1 in complex with olaparib

Gajiwala, K.S., Ryan, K.

(2021) J Biological Chem 296: 100251-100251

Released	2021-01-06
Method	X-RAY DIFFRACTION 1.56 Å
Organisms	Homo sapiens
Macromolecule	Poly [ADP-ribose] polymerase (protein)
Unique Ligands	09L, ZN

Explore in 3D

7KKP \| pdb_00007kkp	Download File View File

Structure of the catalytic domain of tankyrase 1 in complex with niraparib

Gajiwala, K.S., Ryan, K.

(2021) J Biological Chem 296: 100251-100251

Released	2021-01-06
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Homo sapiens
Macromolecule	Poly [ADP-ribose] polymerase (protein)
Unique Ligands	3JD, SO4, ZN

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7KKQ \| pdb_00007kkq	Download File View File

Structure of the catalytic domain of tankyrase 1 in complex with veliparib

Gajiwala, K.S., Ryan, K.

(2021) J Biological Chem 296: 100251-100251

Released	2021-01-06
Method	X-RAY DIFFRACTION 1.59 Å
Organisms	Homo sapiens
Macromolecule	Poly [ADP-ribose] polymerase (protein)
Unique Ligands	78P, ZN

1 to 16 of 16 Structures

Page 1 of 1

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

6WF3 | pdb_00006wf3

Crystal structure of human Naa50 in complex with a cofactor derived inhibitor (compound 1)

6WF5 | pdb_00006wf5

Crystal structure of human Naa50 in complex with a truncated cofactor derived inhibitor (compound 2)

6WFG | pdb_00006wfg

Crystal structure of human Naa50 in complex with an inhibitor (compound 3) identified using DNA encoded library technology

6WFK | pdb_00006wfk

Crystal structure of human Naa50 in complex with CoA and an inhibitor (compound 4a) identified using DNA encoded library technology

6WFN | pdb_00006wfn

Crystal structure of human Naa50 in complex with AcCoA and an inhibitor (compound 4a) identified using DNA encoded library technology

6WFO | pdb_00006wfo

Crystal structure of human Naa50 in complex with AcCoA and an inhibitor (compound 4b) identified using DNA encoded library technology

7KK2 | pdb_00007kk2

Structure of the catalytic domain of PARP1

7KK3 | pdb_00007kk3

Structure of the catalytic domain of PARP1 in complex with talazoparib

7KK4 | pdb_00007kk4

Structure of the catalytic domain of PARP1 in complex with olaparib

7KK5 | pdb_00007kk5

Structure of the catalytic domain of PARP1 in complex with niraparib

7KK6 | pdb_00007kk6

Structure of the catalytic domain of PARP1 in complex with veliparib

7KKM | pdb_00007kkm

Structure of the catalytic domain of tankyrase 1

7KKN | pdb_00007kkn

Structure of the catalytic domain of tankyrase 1 in complex with talazoparib

7KKO | pdb_00007kko

Structure of the catalytic domain of tankyrase 1 in complex with olaparib

7KKP | pdb_00007kkp

Structure of the catalytic domain of tankyrase 1 in complex with niraparib

7KKQ | pdb_00007kkq

Structure of the catalytic domain of tankyrase 1 in complex with veliparib

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

6WF3 | pdb_00006wf3

6WF5 | pdb_00006wf5

6WFG | pdb_00006wfg

6WFK | pdb_00006wfk

6WFN | pdb_00006wfn

6WFO | pdb_00006wfo

7KK2 | pdb_00007kk2

7KK3 | pdb_00007kk3

7KK4 | pdb_00007kk4

7KK5 | pdb_00007kk5

7KK6 | pdb_00007kk6

7KKM | pdb_00007kkm

7KKN | pdb_00007kkn

7KKO | pdb_00007kko

7KKP | pdb_00007kkp

7KKQ | pdb_00007kkq