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235,183 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Ondiviela, M."

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Search Summary

This query matches 12 Structures.

Refinements

Structure Determination Methodology

experimental (12)

Scientific Name of Source Organism

	Homo sapiens (6)
	Klebsiella pneumoniae (4)
	Pseudomonas aeruginosa (1)
	Sus scrofa (1)

Taxonomy

	Eukaryota (7)
	Bacteria (5)

Experimental Method

	X-RAY DIFFRACTION (10)
	SOLUTION NMR (2)

Polymer Entity Type

Protein (12)

Refinement Resolution (Å)

	0.5 - 1.0 (1)
	1.0 - 1.5 (4)
	1.5 - 2.0 (3)
	2.0 - 2.5 (1)
	2.5 - 3.0 (1)

Release Date

	1995 - 1999 (7)
	2020 - 2024 (5)

Enzyme Classification Name

Hydrolases (7)

Symmetry Type

	Asymmetric (10)
	Cyclic (2)

SCOP Classification

	Alpha and beta proteins (a+b) (6)
	All beta proteins (2)
	All alpha proteins (1)

AllSelected

1 to 12 of 12 Structures

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Explore in 3D

1BM6 \| pdb_00001bm6	Download File View File

SOLUTION STRUCTURE OF THE CATALYTIC DOMAIN OF HUMAN STROMELYSIN-1 COMPLEXED TO A POTENT NON-PEPTIDIC INHIBITOR, NMR, 20 STRUCTURES

Li, Y., Zhang, X., Melton, R., Ganu, V., Gonnella, N.C.

(1998) Biochemistry 37: 14048-14056

Released	1999-07-29
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	STROMELYSIN-1 (protein)
Unique Ligands	3MP, CA, HAV, MSB, ZN

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1BTU \| pdb_00001btu	Download File View File

PORCINE PANCREATIC ELASTASE COMPLEXED WITH (3S, 4R)-1-TOLUENESULPHONYL-3-ETHYL-AZETIDIN-2-ONE-4-CARBOXYLIC ACID

Wilmouth, R.C., Clifton, I.J., Schofield, C.J.

(1998) Biochemistry 37: 17506-17513

Released	1999-02-16
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Sus scrofa
Macromolecule	ELASTASE (protein)
Unique Ligands	2BL, CA, SO4

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1HFS \| pdb_00001hfs	Download File View File

CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF HUMAN FIBROBLAST STROMELYSIN-1 INHIBITED WITH THE N-CARBOXY-ALKYL INHIBITOR L-764,004

Becker, J.W.

(1997) J Med Chem 40: 1026-1040

Released	1998-02-18
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	STROMELYSIN-1 (protein)
Unique Ligands	CA, L04, ZN

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1SLM \| pdb_00001slm	Download File View File

CRYSTAL STRUCTURE OF FIBROBLAST STROMELYSIN-1: THE C-TRUNCATED HUMAN PROENZYME

Becker, J.W.

(1995) Protein Sci 4: 1966-1976

Released	1996-12-17
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	STROMELYSIN-1 (protein)
Unique Ligands	CA, ZN

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1SLN \| pdb_00001sln	Download File View File

CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF HUMAN FIBROBLAST STROMELYSIN-1 INHIBITED WITH THE N-CARBOXY-ALKYL INHIBITOR L-702,842

Becker, J.W.

(1995) Protein Sci 4: 1966-1976

Released	1996-12-17
Method	X-RAY DIFFRACTION 2.27 Å
Organisms	Homo sapiens
Macromolecule	STROMELYSIN-1 (protein)
Unique Ligands	8MI, CA, ZN

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1UEA \| pdb_00001uea	Download File View File

MMP-3/TIMP-1 COMPLEX

Bode, W., Maskos, K., Gomis-Rueth, F.-X., Nagase, H.

(1997) Nature 389: 77-81

Released	1998-10-14
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	MATRIX METALLOPROTEINASE-3 (protein) TISSUE INHIBITOR OF METALLOPROTEINASE-1 (protein)
Unique Ligands	CA, ZN

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2SRT \| pdb_00002srt	Download File View File

CATALYTIC DOMAIN OF HUMAN STROMELYSIN-1 AT PH 5.5 AND 40OC COMPLEXED WITH INHIBITOR

Gooley, P.R., O'Connell, J.F.

(1994) Nat Struct Biol 1: 111-118

Released	1995-07-10
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	STROMELYSIN-1 (protein)
Unique Ligands	8MI, ZN

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7UOX \| pdb_00007uox	Download File View File

NDM1-inhibitor co-structure

Scapin, G., Fischmann, T.O.

(2022) J Med Chem 65: 16234-16251

Released	2023-03-08
Method	X-RAY DIFFRACTION 0.99 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Metallo beta-lactamase (protein)
Unique Ligands	ACT, CA, CD, O0L, ZN

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7UOY \| pdb_00007uoy	Download File View File

NDM1-inhibitor co-structure

Scapin, G., Fischmann, T.O.

(2022) J Med Chem 65: 16234-16251

Released	2023-03-08
Method	X-RAY DIFFRACTION 1.47 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Metallo beta-lactamase (protein)
Unique Ligands	CD, O0F, ZN

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7UP1 \| pdb_00007up1	Download File View File

NDM1-inhibitor co-structure

Scapin, G., Fischmann, T.O.

(2022) J Med Chem 65: 16234-16251

Released	2023-03-08
Method	X-RAY DIFFRACTION 1.11 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Metallo beta-lactamase (protein)
Unique Ligands	CD, NZR, ZN

Explore in 3D

7UP2 \| pdb_00007up2	Download File View File

NDM1-inhibitor co-structure

Scapin, G., Fischmann, T.O.

(2022) J Med Chem 65: 16234-16251

Released	2023-03-08
Method	X-RAY DIFFRACTION 1.13 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	Beta-lactamase VIM-1 (protein)
Unique Ligands	NZR, ZN

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7UP3 \| pdb_00007up3	Download File View File

NDM1-inhibitor co-structure

Scapin, G., Fischmann, T.O.

(2022) J Med Chem 65: 16234-16251

Released	2023-03-08
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Metallo beta-lactamase (protein)
Unique Ligands	CD, EPE, NZ0, ZN

1 to 12 of 12 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1BM6 | pdb_00001bm6

SOLUTION STRUCTURE OF THE CATALYTIC DOMAIN OF HUMAN STROMELYSIN-1 COMPLEXED TO A POTENT NON-PEPTIDIC INHIBITOR, NMR, 20 STRUCTURES

1BTU | pdb_00001btu

PORCINE PANCREATIC ELASTASE COMPLEXED WITH (3S, 4R)-1-TOLUENESULPHONYL-3-ETHYL-AZETIDIN-2-ONE-4-CARBOXYLIC ACID

1HFS | pdb_00001hfs

CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF HUMAN FIBROBLAST STROMELYSIN-1 INHIBITED WITH THE N-CARBOXY-ALKYL INHIBITOR L-764,004

1SLM | pdb_00001slm

CRYSTAL STRUCTURE OF FIBROBLAST STROMELYSIN-1: THE C-TRUNCATED HUMAN PROENZYME

1SLN | pdb_00001sln

CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF HUMAN FIBROBLAST STROMELYSIN-1 INHIBITED WITH THE N-CARBOXY-ALKYL INHIBITOR L-702,842

1UEA | pdb_00001uea

MMP-3/TIMP-1 COMPLEX

2SRT | pdb_00002srt

CATALYTIC DOMAIN OF HUMAN STROMELYSIN-1 AT PH 5.5 AND 40OC COMPLEXED WITH INHIBITOR

7UOX | pdb_00007uox

NDM1-inhibitor co-structure

7UOY | pdb_00007uoy

NDM1-inhibitor co-structure

7UP1 | pdb_00007up1

NDM1-inhibitor co-structure

7UP2 | pdb_00007up2

NDM1-inhibitor co-structure

7UP3 | pdb_00007up3

NDM1-inhibitor co-structure

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1BM6 | pdb_00001bm6

1BTU | pdb_00001btu

1HFS | pdb_00001hfs

1SLM | pdb_00001slm

1SLN | pdb_00001sln

1UEA | pdb_00001uea

2SRT | pdb_00002srt

7UOX | pdb_00007uox

7UOY | pdb_00007uoy

7UP1 | pdb_00007up1

7UP2 | pdb_00007up2

7UP3 | pdb_00007up3