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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Li, F."

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Search Summary

This query matches 693 Structures.

Refinements

Structure Determination Methodology

experimental (693)

Scientific Name of Source Organism

	Homo sapiens (353)
	Severe acute respiratory syndrome coronavirus 2 (73)
	Mus musculus (26)
	synthetic construct (24)
	Escherichia coli (21)
	Vicugna pacos (21)
	Sus scrofa (20)
	Schizosaccharomyces pombe 972h- (12)
	Saccharomyces cerevisiae S288C (11)
	Escherichia coli K-12 (10)

More...

Taxonomy

	Eukaryota (497)
	Bacteria (118)
	Riboviria (106)
	Duplodnaviria (34)
	other sequences (25)
	Archaea (14)
	Viruses incertae sedis (3)
	unclassified sequences (2)
	Eukaryota (eukaryotes) (1)
	Varidnaviria (1)

Experimental Method

	X-RAY DIFFRACTION (487)
	ELECTRON MICROSCOPY (188)
	SOLUTION NMR (17)
	SOLID-STATE NMR (1)

Polymer Entity Type

	Protein (680)
	DNA (42)
	RNA (37)

Refinement Resolution (Å)

	1.0 - 1.5 (31)
	1.5 - 2.0 (153)
	2.0 - 2.5 (177)
	2.5 - 3.0 (117)
	3.0 - 3.5 (123)
	3.5 - 4.0 (47)
	4.0 - 4.5 (13)
	> 4.5 (13)

Release Date

	1995 - 1999 (1)
	2000 - 2004 (8)
	2005 - 2009 (25)
	2010 - 2014 (88)
	2015 - 2019 (205)
	2020 - 2024 (340)
	2025 - 2029 (26)

Enzyme Classification Name

	Transferases (196)
	Hydrolases (130)
	Oxidoreductases (25)
	Ligases (23)
	Lyases (2)

Membrane Protein Annotation

	PDBTM (69)
	mpstruc (49)
	OPM (34)
	MemProtMD (37)

Symmetry Type

	Asymmetric (479)
	Cyclic (183)
	Dihedral (24)
	Icosahedral (2)
	Helical (1)

SCOP Classification

	Alpha and beta proteins (a+b) (73)
	Alpha and beta proteins (a/b) (37)
	All beta proteins (52)
	Artifacts (40)
	All alpha proteins (32)
	Coiled coil proteins (1)
	Multi-domain proteins (alpha and beta) (1)
	Membrane and cell surface proteins and peptides (2)
	Small proteins (2)

AllSelected

1 to 25 of 693 Structures

Page 1 of 28

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1M4M \| pdb_00001m4m	Download File View File

Mouse Survivin

Muchmore, S.W., Chen, J., Jakob, C., Zakula, D., Matayoshi, E.D., Wu, W., Zhang, H., Li, F., Ng, S.C., Altieri, D.C.

(2000) Mol Cell 6: 173-182

Released	2002-09-25
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Mus musculus
Macromolecule	BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 5 (protein)
Unique Ligands	ZN

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1MIV \| pdb_00001miv	Download File View File

Crystal structure of Bacillus stearothermophilus CCA-adding enzyme

Li, F., Xiong, Y., Wang, J., Cho, H.D., Weiner, A.M., Steitz, T.A.

(2002) Cell 111: 815-824

Released	2002-12-13
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Geobacillus stearothermophilus
Macromolecule	tRNA CCA-adding enzyme (protein)
Unique Ligands	MG

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1MIW \| pdb_00001miw	Download File View File

Crystal structure of Bacillus stearothermophilus CCA-adding enzyme in complex with ATP

Li, F., Xiong, Y., Wang, J., Cho, H.D., Weiner, A.M., Steitz, T.A.

(2002) Cell 111: 815-824

Released	2002-12-13
Method	X-RAY DIFFRACTION 3 Å
Organisms	Geobacillus stearothermophilus
Macromolecule	tRNA CCA-adding enzyme (protein)
Unique Ligands	ATP, MG

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1MIY \| pdb_00001miy	Download File View File

Crystal structure of Bacillus stearothermophilus CCA-adding enzyme in complex with CTP

Li, F., Xiong, Y., Wang, J., Cho, H.D., Weiner, A.M., Steitz, T.A.

(2002) Cell 111: 815-824

Released	2002-12-13
Method	X-RAY DIFFRACTION 3.52 Å
Organisms	Geobacillus stearothermophilus
Macromolecule	tRNA CCA-adding enzyme (protein)
Unique Ligands	CTP, MG

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1QFD \| pdb_00001qfd	Download File View File

NMR SOLUTION STRUCTURE OF ALPHA-AMYLASE INHIBITOR (AAI)

Lu, S., Deng, P., Liu, X., Luo, J., Han, R., Gu, X., Liang, S., Wang, X., Feng, L., Lozanov, V., Patthy, A., Pongor, S.

(1999) J Biological Chem 274: 20473-20478

Released	1999-07-16
Method	SOLUTION NMR
Organisms	Amaranthus hypochondriacus
Macromolecule	PROTEIN (ALPHA-AMYLASE INHIBITOR) (protein)

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1R89 \| pdb_00001r89	Download File View File

Crystal Structures of an Archaeal Class I CCA-Adding Enzyme and Its Nucleotide Complexes

Xiong, Y., Li, F., Wang, J., Weiner, A.M., Steitz, T.A.

(2003) Mol Cell 12: 1165-1172

Released	2003-12-16
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Archaeoglobus fulgidus
Macromolecule	tRNA nucleotidyltransferase (protein)
Unique Ligands	CL, CTP, MG, MN, NA

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1R8A \| pdb_00001r8a	Download File View File

Crystal Structures of an Archaeal Class I CCA-Adding Enzyme and Its Nucleotide Complexes

Xiong, Y., Li, F., Wang, J., Weiner, A.M., Steitz, T.A.

(2003) Mol Cell 12: 1165-1172

Released	2003-12-16
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Archaeoglobus fulgidus
Macromolecule	tRNA nucleotidyltransferase (protein)
Unique Ligands	MN, NA

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1R8B \| pdb_00001r8b	Download File View File

Crystal Structures of an Archaeal Class I CCA-Adding Enzyme and Its Nucleotide

Xiong, Y., Li, F., Wang, J., Weiner, A.M., Steitz, T.A.

(2003) Mol Cell 12: 1165-1172

Released	2003-12-16
Method	X-RAY DIFFRACTION 2 Å
Organisms	Archaeoglobus fulgidus
Macromolecule	tRNA nucleotidyltransferase (protein)
Unique Ligands	ATP, CL, MG, MN, NA

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1R8C \| pdb_00001r8c	Download File View File

Crystal Structures of an Archaeal Class I CCA-Adding Enzyme and Its Nucleotide

Xiong, Y., Li, F., Wang, J., Weiner, A.M., Steitz, T.A.

(2003) Mol Cell 12: 1165-1172

Released	2003-12-16
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Archaeoglobus fulgidus
Macromolecule	tRNA nucleotidyltransferase (protein)
Unique Ligands	MN, NA, UTP

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2AJF \| pdb_00002ajf	Download File View File

Structure of SARS coronavirus spike receptor-binding domain complexed with its receptor

Li, F., Li, W., Farzan, M., Harrison, S.C.

(2005) Science 309: 1864-1868

Released	2005-09-20
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens Severe acute respiratory syndrome-related coronavirus
Macromolecule	Angiotensin-converting enzyme-Related Carboxypeptidase (Ace2) (protein) SARS-coronavirus spike protein (protein)
Unique Ligands	CL, NAG, ZN
Unique branched monosaccharides	BMA, NAG

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2FFL \| pdb_00002ffl	Download File View File

Crystal Structure of Dicer from Giardia intestinalis

Doudna, J.A., MacRae, I.J., Adams, P.D.

(2006) Science 311: 195-198

Released	2006-01-24
Method	X-RAY DIFFRACTION 3.33 Å
Organisms	Giardia intestinalis
Macromolecule	Dicer (protein)
Unique Ligands	MN

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2FIH \| pdb_00002fih	Download File View File

Crystal Structure Analysis of the B-DNA Dodecamer CGCGAA-aU-TCGCG, with Incorporated Arabino-Uridine (aU)

Egli, M., Li, F.

(2006) Biochemistry 45: 4141-4152

Released	2006-05-23
Method	X-RAY DIFFRACTION 1.13 Å
Macromolecule	5'-D(CPGPCPGPAPAP(UAR)PTPCPGPCPG)-3' (nucleic acid)
Unique Ligands	MG

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2FII \| pdb_00002fii	Download File View File

Crystal Structure Analysis of the B-DNA Dodecamer CGCGAAT-aU-CGCG, with Incorporated Arabino-Uridin (aU)

Egli, M., Li, F.

(2006) Biochemistry 45: 4141-4152

Released	2006-05-23
Method	X-RAY DIFFRACTION 1.24 Å
Macromolecule	5'-D(CPGPCPGPAPAPTP(UAR)PCPGPCPG)-3' (nucleic acid)
Unique Ligands	MG

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2FIJ \| pdb_00002fij	Download File View File

Crystal Structure Analysis of the A-DNA Decamer GCGT-2'OMeA-aU-ACGC, with Incorporated 2'-O-Methylated-Adenosine (2'OMeA) and Arabino-Uridine (aU)

Egli, M., Li, F.

(2006) Biochemistry 45: 4141-4152

Released	2006-05-23
Method	X-RAY DIFFRACTION 1.19 Å
Macromolecule	5'-D(GPCPGPTP(A2M)P(UAR)PAPCPGPC)-3' (nucleic acid)
Unique Ligands	CL, NCO

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2FIL \| pdb_00002fil	Download File View File

Crystal Structure Analysis of the A-DNA Decamer GCGT-2'OMeA-faT-ACGC, with Incorporated 2'-O-Methylated-Adenosine (2'OMeA) and 2'-Fluoroarabino-Thymidine (faT)

Egli, M., Li, F.

(2006) Biochemistry 45: 4141-4152

Released	2006-05-23
Method	X-RAY DIFFRACTION 1.69 Å
Macromolecule	5'-D(GPCPGPTP(A2M)P(TAF)PAPCPGPC)-3' (nucleic acid)
Unique Ligands	NCO

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2G92 \| pdb_00002g92	Download File View File

Crystal Structure Analysis of the RNA Dodecamer CGC-(NF2)-AAUUAGCG, with an Incorporated 2,4-Difluorotoluyl Residue (NF2)

Egli, M., Li, F.

(2006) ACS Chem Biol 1: 176-183

Released	2006-04-18
Method	X-RAY DIFFRACTION 1.61 Å
Macromolecule	5'-R(CPGPCP(NF2)PAPAPUPUPAPGPCPG)-3' (nucleic acid)

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2GFS \| pdb_00002gfs	Download File View File

P38 Kinase Crystal Structure in complex with RO3201195

Harris, S.F., Bertrand, J., Villasenor, A.

(2006) J Med Chem 49: 1562-1575

Released	2006-04-18
Method	X-RAY DIFFRACTION 1.752 Å
Organisms	Homo sapiens
Macromolecule	Mitogen-Activated Protein Kinase 14 (protein)
Unique Ligands	PQB

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2LN0 \| pdb_00002ln0	Download File View File

Structure of MOZ

Qiu, Y.

(2012) Genes Dev 26: 1376-1391

Released	2012-06-27
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Histone acetyltransferase KAT6A (protein)
Unique Ligands	ZN

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2LNW \| pdb_00002lnw	Download File View File

Identification and structural basis for a novel interaction between Vav2 and Arap3

Wu, B., Zhang, J., Wu, J., Shi, Y.

(2012) J Struct Biol 180: 84-95

Released	2012-11-21
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 (protein) Guanine nucleotide exchange factor VAV2 (protein)

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2LNX \| pdb_00002lnx	Download File View File

Solution structure of Vav2 SH2 domain

Wu, B., Zhang, J., Wu, J., Shi, Y.

(2012) J Struct Biol 180: 84-95

Released	2012-11-21
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Guanine nucleotide exchange factor VAV2 (protein)

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2LS2 \| pdb_00002ls2	Download File View File

1H Chemical Shift Assignments for the first transmembrane domain from human copper transport 1

Yang, L., Huang, Z., Li, F.

To be published

Released	2012-06-06
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	High affinity copper uptake protein 1 (protein)

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2LS3 \| pdb_00002ls3	Download File View File

1H Chemical Shift Assignments for the secondary transmembrane domain from human copper transport 1

Yang, L., Huang, Z., Li, F.

To be published

Released	2012-06-06
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	High affinity copper uptake protein 1 (protein)

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2LS4 \| pdb_00002ls4	Download File View File

1H Chemical Shift Assignments for the third transmembrane domain from the human copper transport 1

Yang, L., Huang, Z., Li, F.

To be published

Released	2012-06-06
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	High affinity copper uptake protein 1 (protein)

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2LUY \| pdb_00002luy	Download File View File

Solution structure of the tandem zinc finger domain of fission yeast Stc1

He, C., Shi, Y., Bayne, E., Wu, J.

(2013) Proc Natl Acad Sci U S A 110: E1879-E1888

Released	2013-05-08
Method	SOLUTION NMR
Organisms	Schizosaccharomyces pombe 972h-
Macromolecule	Meiotic chromosome segregation protein P8B7.28c (protein)
Unique Ligands	ZN