RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

234,440 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Citation Author = "Lee, H.S."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 78 Structures.

Refinements

Structure Determination Methodology

experimental (78)

Scientific Name of Source Organism

	Homo sapiens (22)
	Thermococcus onnurineus NA1 (10)
	Mus musculus (8)
	Escherichia coli (5)
	Conus anemone (4)
	Conus episcopatus (4)
	Staphylococcus aureus (4)
	Pseudomonas putida (3)
	Pyrococcus furiosus (3)
	Pyrococcus furiosus DSM 3638 (3)

More...

Taxonomy

	Eukaryota (38)
	Bacteria (23)
	Archaea (17)
	Monodnaviria (4)
	Eukaryota (eukaryotes) (3)
	other sequences (3)
	Varidnaviria (2)
	Duplodnaviria (1)

Experimental Method

	X-RAY DIFFRACTION (65)
	SOLUTION NMR (11)
	ELECTRON MICROSCOPY (2)

Polymer Entity Type

Protein (78)

Refinement Resolution (Å)

	1.0 - 1.5 (3)
	1.5 - 2.0 (19)
	2.0 - 2.5 (23)
	2.5 - 3.0 (16)
	3.0 - 3.5 (4)
	3.5 - 4.0 (2)

Release Date

	2000 - 2004 (15)
	2005 - 2009 (8)
	2010 - 2014 (4)
	2015 - 2019 (22)
	2020 - 2024 (25)
	2025 - 2029 (4)

Enzyme Classification Name

	Hydrolases (20)
	Transferases (9)
	Isomerases (3)
	Oxidoreductases (3)
	Lyases (2)

Membrane Protein Annotation

OPM (1)

Symmetry Type

	Asymmetric (55)
	Cyclic (22)
	Dihedral (8)

SCOP Classification

	Alpha and beta proteins (a/b) (16)
	Alpha and beta proteins (a+b) (11)
	All beta proteins (4)
	Artifacts (8)
	Multi-domain proteins (alpha and beta) (4)
	All alpha proteins (3)

AllSelected

1 to 25 of 78 Structures

Page 1 of 4

Sort by

Explore in 3D

1IZY \| pdb_00001izy	Download File View File

Crystal structure of Hsp31

Cha, S.S., Lee, S.J.

(2003) J Biological Chem 278: 44552-44559

Released	2003-10-16
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Escherichia coli
Macromolecule	Hsp31 (protein)

Explore in 3D

1IZZ \| pdb_00001izz	Download File View File

Crystal structure of Hsp31

Cha, S.S., Lee, S.J.

(2003) J Biological Chem 278: 44552-44559

Released	2003-10-16
Method	X-RAY DIFFRACTION 2.31 Å
Organisms	Escherichia coli
Macromolecule	Hsp31 (protein)

Explore in 3D

1J42 \| pdb_00001j42	Download File View File

Crystal Structure of Human DJ-1

Cha, S.S.

(2003) J Biological Chem 278: 44552-44559

Released	2004-02-03
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	RNA-binding protein regulatory subunit (protein)

Explore in 3D

1JTD \| pdb_00001jtd	Download File View File

Crystal structure of beta-lactamase inhibitor protein-II in complex with TEM-1 beta-lactamase

Lim, D.C., Park, H.U., De Castro, L., Kang, S.G., Lee, H.S., Jensen, S., Lee, K.J., Strynadka, N.C.J.

(2001) Nat Struct Biol 8: 848-852

Released	2001-10-03
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli Streptomyces exfoliatus
Macromolecule	TEM-1 beta-lactamase (protein) beta-lactamase inhibitor protein II (protein)
Unique Ligands	CA

Explore in 3D

1JTG \| pdb_00001jtg	Download File View File

CRYSTAL STRUCTURE OF TEM-1 BETA-LACTAMASE / BETA-LACTAMASE INHIBITOR PROTEIN COMPLEX

Strynadka, N.C.J., Jensen, S.E., Alzari, P.M., James, M.N.

(2001) Nat Struct Biol 8: 848-852

Released	2001-10-17
Method	X-RAY DIFFRACTION 1.73 Å
Organisms	Escherichia coli Streptomyces clavuligerus
Macromolecule	BETA-LACTAMASE INHIBITORY PROTEIN (protein) BETA-LACTAMASE TEM (protein)
Unique Ligands	CA

Explore in 3D

1N4M \| pdb_00001n4m	Download File View File

Structure of Rb tumor suppressor bound to the transactivation domain of E2F-2

Lee, C., Chang, J.H., Lee, H.S., Cho, Y.

(2002) Genes Dev 16: 3199-3212

Released	2003-01-07
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	Retinoblastoma Pocket (protein) Transcription factor E2F2 (protein)

Explore in 3D

1SGW \| pdb_00001sgw	Download File View File

Putative ABC transporter (ATP-binding protein) from Pyrococcus furiosus Pfu-867808-001

Liu, Z.J., Tempel, W., Shah, A., Chen, L., Lee, D., Kelley, L.-L.C., Dillard, B.D., Rose, J.P., Eneh, J.C., Hopkins, R.C., Jenney Jr., F.E., Lee, H.S., Poole II, F.L., Shah, C., Sugar, F.J., Adams, M.W.W., Richardson, D.C., Richardson, J.S., Wang, B.C., Southeast Collaboratory for Structural Genomics (SECSG)

To be published

Released	2004-08-10
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Pyrococcus furiosus DSM 3638
Macromolecule	putative ABC transporter (protein)
Unique Ligands	CL, NA

Explore in 3D

1SMA \| pdb_00001sma	Download File View File

CRYSTAL STRUCTURE OF A MALTOGENIC AMYLASE

Kim, J.S., Cha, S.S., Oh, B.H.

(1999) J Biological Chem 274: 26279-26286

Released	2000-04-26
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Thermus sp. IM6501
Macromolecule	MALTOGENIC AMYLASE (protein)

Explore in 3D

1TWL \| pdb_00001twl	Download File View File

Inorganic pyrophosphatase from Pyrococcus furiosus Pfu-264096-001

Zhou, W., Tempel, W., Liu, Z.-J., Chen, L., Clancy Kelley, L.-L., Dillard, B.D., Hopkins, R.C., Arendall III, W.B., Rose, J.P., Eneh, J.C., Hopkins, R.C., Jenney Jr., F.E., Lee, H.S., Li, T., Poole II, F.L., Shah, C., Sugar, F.J., Adams, M.W.W., Richardson, J.S., Richardson, D.C., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG)

To be published

Released	2004-11-23
Method	X-RAY DIFFRACTION 2.201 Å
Organisms	Pyrococcus furiosus
Macromolecule	Inorganic pyrophosphatase (protein)

Explore in 3D

1UKH \| pdb_00001ukh	Download File View File

Structural basis for the selective inhibition of JNK1 by the scaffolding protein JIP1 and SP600125

Heo, Y.-S., Kim, Y.K., Sung, B.-J., Lee, H.S., Lee, J.I., Seo, C.I., Park, S.-Y., Kim, J.H., Hyun, Y.-L., Jeon, Y.H., Ro, S., Lee, T.G., Cho, J.M., Hwang, K.Y., Yang, C.-H.

(2004) EMBO J 23: 2185-2195

Released	2004-08-30
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	11-mer peptide from C-jun-amino-terminal kinase interacting protein 1 (protein) Mitogen-activated protein kinase 8 isoform 4 (protein)

Explore in 3D

1UKI \| pdb_00001uki	Download File View File

Structural basis for the selective inhibition of JNK1 by the scaffolding protein JIP1 and SP600125

Heo, Y.-S., Kim, Y.K., Sung, B.-J., Lee, H.S., Lee, J.I., Seo, C.I., Park, S.-Y., Kim, J.H., Hyun, Y.-L., Jeon, Y.H., Ro, S., Lee, T.G., Cho, J.M., Hwang, K.Y., Yang, C.-H.

(2004) EMBO J 23: 2185-2195

Released	2004-08-30
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	11-mer peptide from C-jun-amino-terminal kinase interacting protein 1 (protein) mitogen-activated protein kinase 8 isoform 4 (protein)
Unique Ligands	537

Explore in 3D

1VJK \| pdb_00001vjk	Download File View File

Putative molybdopterin converting factor, subunit 1 from Pyrococcus furiosus, Pfu-562899-001

Chen, L., Liu, Z.J., Tempel, W., Shah, A., Lee, D., Rose, J.P., Eneh, J.C., Hopkins, R.C., Jenney Jr., F.E., Lee, H.S., Li, T., Poole II, F.L., Shah, C., Sugar, F.J., Adams, M.W.W., Richardson, D.C., Richardson, J.S., Wang, B.C., Southeast Collaboratory for Structural Genomics (SECSG)

To be published

Released	2004-08-10
Method	X-RAY DIFFRACTION 1.51 Å
Organisms	Pyrococcus furiosus
Macromolecule	molybdopterin converting factor, subunit 1 (protein)

Explore in 3D

1VZZ \| pdb_00001vzz	Download File View File

CRYSTAL STRUCTURE OF MUTANT ENZYME Y32F/D103L OF KETOSTEROID ISOMERASE FROM PSEUDOMONAS PUTIDA BIOTYPE B

Jang, D.S., Cha, H.J., Choi, K.Y.

(2004) Biochem J 382: 967

Released	2004-07-08
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Pseudomonas putida
Macromolecule	STEROID DELTA-ISOMERASE (protein)

Explore in 3D

1W01 \| pdb_00001w01	Download File View File

Crystal structure of mutant enzyme Y57F/D103L of ketosteroid isomerase from Pseudomonas putida biotype B

Jang, D.S., Choi, K.Y.

(2004) Biochem J 382: 967

Released	2004-07-08
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Pseudomonas putida
Macromolecule	STEROID DELTA-ISOMERASE (protein)

Explore in 3D

1W02 \| pdb_00001w02	Download File View File

Crystal structure of mutant enzyme Y16F/D103L of ketosteroid isomerase from Pseudomonas putida biotype B

Jang, D.S., Choi, K.Y.

(2004) Biochem J 382: 967

Released	2004-07-08
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Pseudomonas putida
Macromolecule	STEROID DELTA-ISOMERASE (protein)

Explore in 3D

1ZKJ \| pdb_00001zkj	Download File View File

Structural Basis for the Extended Substrate Spectrum of CMY-10, a Plasmid-Encoded Class C beta-lactamase

Cha, S.S., Jung, H.I., An, Y.J., Lee, S.H.

(2006) Mol Microbiol 60: 907-916

Released	2006-04-18
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Klebsiella aerogenes
Macromolecule	extended-spectrum beta-lactamase (protein)
Unique Ligands	ACY, ZN

Explore in 3D

2BO1 \| pdb_00002bo1	Download File View File

Crystal structure of a hybrid ribosomal protein L30e with surface residues from T. celer, and core residues from yeast

Lee, C.F., Cha, S.S., Lee, H.S., Wong, K.B.

To be published

Released	2006-08-23
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Thermococcus celer
Macromolecule	50S RIBOSOMAL PROTEIN L30E (protein)
Unique Ligands	SO4

Explore in 3D

2FZF \| pdb_00002fzf	Download File View File

Hypothetical Protein Pfu-1136390-001 From Pyrococcus furiosus

Fu, Z.-Q., Liu, Z.-J., Lee, D., Kelley, L., Chen, L., Tempel, W., Shah, N., Horanyi, P., Lee, H.S., Habel, J., Dillard, B.D., Nguyen, D., Chang, S.-H., Zhang, H., Chang, J., Sugar, F.J., Poole, F.L., Jenney Jr., F.E., Adams, M.W.W., Rose, J.P., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG)

To be published

Released	2006-02-21
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Pyrococcus furiosus
Macromolecule	hypothetical protein (protein)

Explore in 3D

2GMG \| pdb_00002gmg	Download File View File

Solution NMR Structure of protein PF0610 from Pyrococcus furiosus, Northeast Structural Genomics Consortium Target PfG3

Wang, X., Lee, H.S., Adams, M.W., Northeast Structural Genomics Consortium (NESG), Montelione, G.T., Prestegard, J.H.

(2007) Biochemistry 46: 752-761

Released	2006-11-28
Method	SOLUTION NMR
Organisms	Pyrococcus furiosus DSM 3638
Macromolecule	hypothetical protein Pf0610 (protein)

Explore in 3D

2MP8 \| pdb_00002mp8	Download File View File

NMR structure of NKR-5-3B

Rosengren, K.J., Craik, D.J.

(2015) Biochemistry 54: 4863-4876

Released	2015-05-13
Method	SOLUTION NMR
Organisms	Enterococcus faecalis
Macromolecule	NKR-5-3B (protein)

Explore in 3D

2P6Z \| pdb_00002p6z	Download File View File

Enzymatic and Structural Characterisation of Amphinase, a Novel Cytotoxic Ribonuclease from Rana pipiens Oocytes

Singh, U.P.

(2007) J Mol Biology 371: 93-111

Released	2007-05-29
Method	X-RAY DIFFRACTION 1.93 Å
Organisms	Lithobates pipiens
Macromolecule	Recombinant Amphinase-2 (protein)
Unique Ligands	CIT, NA

Explore in 3D

2P7S \| pdb_00002p7s	Download File View File

Enzymatic and Structural Characterisation of Amphinase, a Novel Cytotoxic Ribonuclease from Rana pipiens Oocytes

Singh, U.P.

(2007) J Mol Biology 371: 93-111

Released	2007-05-29
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Lithobates pipiens
Macromolecule	Amphinase-2 (protein)
Unique Ligands	ACT, GOL
Unique branched monosaccharides	NAG

Explore in 3D

2PK8 \| pdb_00002pk8	Download File View File

Crystal structure of an uncharacterized protein PF0899 from Pyrococcus furiosus

Liu, Z.J., Tempel, W., Chen, L., Shah, A., Lee, D., Clancy-Kelley, L.L., Dillard, B.D., Rose, J.P., Sugar, F.J., Jenny Jr., F.E., Lee, H.S., Izumi, M., Shah, C., Poole III, F.L., Adams, M.W.W., Richardson, J.S., Richardson, D.C., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG)

(2007) Acta Crystallogr Sect F Struct Biol Cryst Commun 63: 549-552

Released	2007-05-22
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Pyrococcus furiosus DSM 3638
Macromolecule	Uncharacterized protein PF0899 (protein)
Unique Ligands	AUC

Explore in 3D

3FCA \| pdb_00003fca	Download File View File

Genetic Incorporation of a Metal-ion Chelating Amino Acid into proteins as biophysical probe

Wang, F., Lee, H., Spraggon, G., Schultz, P.G.

(2009) J Am Chem Soc 131: 2481-2483

Released	2009-02-17
Method	X-RAY DIFFRACTION 2.149 Å
Organisms	Thermus thermophilus
Macromolecule	Cysteine synthase (protein)
Unique Ligands	ZN

Explore in 3D

3K1J \| pdb_00003k1j	Download File View File

Crystal structure of Lon protease from Thermococcus onnurineus NA1

Cha, S.S., An, Y.J.

(2010) EMBO J 29: 3520-3530

Released	2010-09-22
Method	X-RAY DIFFRACTION 2 Å
Organisms	Thermococcus onnurineus NA1
Macromolecule	ATP-dependent protease Lon (protein)
Unique Ligands	ADP, PE4, PE8

1 to 25 of 78 Structures

Page 1 of 4

Sort by

About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy

Support
Contact Us
Help
Website FAQ
Glossary
Service Status

RCSB PDB is hosted by

RCSB PDB is a member of the

RCSB Partners
Nucleic Acid Knowledgebase

wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1IZY | pdb_00001izy

1IZZ | pdb_00001izz

1J42 | pdb_00001j42

1JTD | pdb_00001jtd

1JTG | pdb_00001jtg

1N4M | pdb_00001n4m

1SGW | pdb_00001sgw

1SMA | pdb_00001sma

1TWL | pdb_00001twl

1UKH | pdb_00001ukh

1UKI | pdb_00001uki

1VJK | pdb_00001vjk

1VZZ | pdb_00001vzz

1W01 | pdb_00001w01

1W02 | pdb_00001w02

1ZKJ | pdb_00001zkj

2BO1 | pdb_00002bo1

2FZF | pdb_00002fzf

2GMG | pdb_00002gmg

2MP8 | pdb_00002mp8

2P6Z | pdb_00002p6z

2P7S | pdb_00002p7s

2PK8 | pdb_00002pk8

3FCA | pdb_00003fca

3K1J | pdb_00003k1j