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234,785 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Klinman, J.P."

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Search Summary

This query matches 55 Structures.

Refinements

Structure Determination Methodology

experimental (55)

Scientific Name of Source Organism

	Glycine max (19)
	Ogataea angusta (16)
	Equus caballus (8)
	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (3)
	Methylorubrum extorquens AM1 (3)
	Geobacillus stearothermophilus (2)
	Klebsiella pneumoniae (2)
	Methylorubrum extorquens (1)
	Pseudomonas putida KT2440 (1)

Taxonomy

	Eukaryota (43)
	Bacteria (12)

Experimental Method

	X-RAY DIFFRACTION (54)
	SOLUTION NMR (1)

Polymer Entity Type

Protein (55)

Refinement Resolution (Å)

	1.0 - 1.5 (10)
	1.5 - 2.0 (21)
	2.0 - 2.5 (17)
	2.5 - 3.0 (5)
	3.0 - 3.5 (1)

Release Date

	1995 - 1999 (5)
	2000 - 2004 (10)
	2005 - 2009 (7)
	2010 - 2014 (16)
	2015 - 2019 (15)
	2020 - 2024 (2)

Enzyme Classification Name

Oxidoreductases (55)

Symmetry Type

	Cyclic (31)
	Asymmetric (23)
	Dihedral (14)

SCOP Classification

	All beta proteins (28)
	All alpha proteins (22)
	Alpha and beta proteins (a+b) (4)
	Alpha and beta proteins (a/b) (8)
	Artifacts (5)

AllSelected

1 to 25 of 55 Structures

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1A2V \| pdb_00001a2v	Download File View File

COPPER AMINE OXIDASE FROM HANSENULA POLYMORPHA

Li, R., Mathews, F.S.

(1997) Acta Crystallogr D Biol Crystallogr 53: 364-370

Released	1998-05-27
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Ogataea angusta
Macromolecule	METHYLAMINE OXIDASE (protein)
Unique Ligands	CU

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1A71 \| pdb_00001a71	Download File View File

TERNARY COMPLEX OF AN ACTIVE SITE DOUBLE MUTANT OF HORSE LIVER ALCOHOL DEHYDROGENASE, PHE93=>TRP, VAL203=>ALA WITH NAD AND TRIFLUOROETHANOL

Colby, T.D., Bahnson, B.J., Chin, J.K., Klinman, J.P., Goldstein, B.M.

(1998) Biochemistry 37: 9295-9304

Released	1998-06-17
Method	X-RAY DIFFRACTION 2 Å
Organisms	Equus caballus
Macromolecule	LIVER ALCOHOL DEHYDROGENASE (protein)
Unique Ligands	ETF, NAD, ZN

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1A72 \| pdb_00001a72	Download File View File

AN ACTIVE-SITE DOUBLE MUTANT (PHE93->TRP, VAL203->ALA) OF HORSE LIVER ALCOHOL DEHYDROGENASE IN COMPLEX WITH THE ISOSTERIC NAD ANALOG CPAD

Colby, T.D., Bahnson, B.J., Chin, J.K., Klinman, J.P., Goldstein, B.M.

(1998) Biochemistry 37: 9295-9304

Released	1998-06-17
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Equus caballus
Macromolecule	HORSE LIVER ALCOHOL DEHYDROGENASE (protein)
Unique Ligands	PAD, ZN

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1AXE \| pdb_00001axe	Download File View File

CRYSTAL STRUCTURE OF THE ACTIVE-SITE MUTANT PHE93->TRP OF HORSE LIVER ALCOHOL DEHYDROGENASE IN COMPLEX WITH NAD AND INHIBITOR TRIFLUOROETHANOL

Colby, T.D., Chin, J.K., Goldstein, B.M.

(1997) Proc Natl Acad Sci U S A 94: 12797-12802

Released	1998-04-15
Method	X-RAY DIFFRACTION 2 Å
Organisms	Equus caballus
Macromolecule	ALCOHOL DEHYDROGENASE (protein)
Unique Ligands	ETF, NAD, ZN

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1AXG \| pdb_00001axg	Download File View File

CRYSTAL STRUCTURE OF THE VAL203->ALA MUTANT OF LIVER ALCOHOL DEHYDROGENASE COMPLEXED WITH COFACTOR NAD AND INHIBITOR TRIFLUOROETHANOL SOLVED TO 2.5 ANGSTROM RESOLUTION

Colby, T.D., Chin, J.K., Bahnson, B.J., Goldstein, B.M., Klinman, J.P.

(1997) Proc Natl Acad Sci U S A 94: 12797-12802

Released	1998-04-15
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Equus caballus
Macromolecule	ALCOHOL DEHYDROGENASE (protein)
Unique Ligands	ETF, NAD, ZN

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1EKM \| pdb_00001ekm	Download File View File

CRYSTAL STRUCTURE AT 2.5 A RESOLUTION OF ZINC-SUBSTITUTED COPPER AMINE OXIDASE OF HANSENULA POLYMORPHA EXPRESSED IN ESCHERICHIA COLI

Chen, Z., Schwartz, B., Williams, N.K., Li, R., Klinman, J.P., Mathews, F.S.

(2000) Biochemistry 39: 9709-9717

Released	2000-08-23
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Ogataea angusta
Macromolecule	COPPER AMINE OXIDASE (protein)
Unique Ligands	ZN

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1F8N \| pdb_00001f8n	Download File View File

LIPOXYGENASE-1 (SOYBEAN) AT 100K, NEW REFINEMENT

Tomchick, D.R., Minor, W., Holman, T.

(2001) Biochemistry 40: 7509-7517

Released	2001-07-04
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Glycine max
Macromolecule	LIPOXYGENASE-1 (protein)
Unique Ligands	FE2

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1FGM \| pdb_00001fgm	Download File View File

LIPOXYGENASE-1 (SOYBEAN) AT 100K, N694H MUTANT

Tomchick, D.R., Minor, W., Holman, T.R.

(2001) Biochemistry 40: 7509-7517

Released	2001-10-24
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Glycine max
Macromolecule	SEED LIPOXYGENASE-1 (protein)
Unique Ligands	FE

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1FGO \| pdb_00001fgo	Download File View File

LIPOXYGENASE-1 (SOYBEAN) AT 100K, Q495A MUTANT

Tomchick, D.R., Minor, W., Holman, T.

(2001) Biochemistry 40: 7509-7517

Released	2001-07-04
Method	X-RAY DIFFRACTION 1.62 Å
Organisms	Glycine max
Macromolecule	SEED LIPOXYGENASE-1 (protein)
Unique Ligands	FE

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1FGQ \| pdb_00001fgq	Download File View File

LIPOXYGENASE-1 (SOYBEAN) AT 100K, Q495E MUTANT

Tomchick, D.R., Minor, W., Holman, T.

(2001) Biochemistry 40: 7509-7517

Released	2001-07-04
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Glycine max
Macromolecule	SEED LIPOXYGENASE-1 (protein)
Unique Ligands	FE

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1FGR \| pdb_00001fgr	Download File View File

LIPOXYGENASE-1 (SOYBEAN) AT 100K, Q697E MUTANT

Tomchick, D.R., Minor, W., Holman, T.

(2001) Biochemistry 40: 7509-7517

Released	2001-07-04
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Glycine max
Macromolecule	SEED LIPOXYGENASE-1 (protein)
Unique Ligands	FE

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1FGT \| pdb_00001fgt	Download File View File

LIPOXYGENASE-1 (SOYBEAN) AT 100K, Q697N MUTANT

Tomchick, D.R., Minor, W., Holman, T.

(2001) Biochemistry 40: 7509-7517

Released	2001-07-04
Method	X-RAY DIFFRACTION 1.62 Å
Organisms	Glycine max
Macromolecule	SEED LIPOXYGENASE-1 (protein)
Unique Ligands	FE

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1OTV \| pdb_00001otv	Download File View File

PqqC, Pyrroloquinolinquinone Synthase C

Magnusson, O.T., Toyama, H., Saeki, M., Rojas, A., Reed, J.C., Adachi, O., Klinman, J.P., SChwarzenbacher, R.

(2004) Proc Natl Acad Sci U S A 101: 7913-7918

Released	2004-05-11
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Coenzyme PQQ synthesis protein C (protein)

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1OTW \| pdb_00001otw	Download File View File

Crystal structure of PqqC in complex with PQQ and a putative H2O2

Magnusson, O.T., Toyama, H., Saeki, M., Rojas, A., Reed, J.C., Liddington, R.C., Klinman, J.P., Schwarzenbacher, R.

(2004) Proc Natl Acad Sci U S A 101: 7913-7918

Released	2004-05-11
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Coenzyme PQQ synthesis protein C (protein)
Unique Ligands	PEO, PQQ

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1RJW \| pdb_00001rjw	Download File View File

CRYSTAL STRUCTURE OF NAD(+)-DEPENDENT ALCOHOL DEHYDROGENASE FROM BACILLUS STEAROTHERMOPHILUS STRAIN LLD-R

Ceccarelli, C., Bahnson, B.J.

(2004) Biochemistry 43: 5266-5277

Released	2004-05-11
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Geobacillus stearothermophilus
Macromolecule	Alcohol dehydrogenase (protein)
Unique Ligands	ETF, ZN

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1ZDR \| pdb_00001zdr	Download File View File

DHFR from Bacillus Stearothermophilus

Kim, H.S., Damo, S.M., Lee, S.Y., Wemmer, D., Klinman, J.P.

(2005) Biochemistry 44: 11428-11439

Released	2005-08-30
Method	X-RAY DIFFRACTION 2 Å
Organisms	Geobacillus stearothermophilus
Macromolecule	dihydrofolate reductase (protein)
Unique Ligands	GOL, SO4

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2OOV \| pdb_00002oov	Download File View File

Crystal Structure of Hansenula polymorpha amine oxidase to 1.7 Angstroms

Johnson, B.J., Wilmot, C.M.

(2007) J Biological Chem 282: 17767-17776

Released	2007-04-10
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Ogataea angusta
Macromolecule	Peroxisomal copper amine oxidase (protein)
Unique Ligands	CU, GOL, PO4

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2OQE \| pdb_00002oqe	Download File View File

Crystal Structure of Hansenula polymorpha amine oxidase in complex with Xe to 1.6 Angstroms

Johnson, B.J., Wilmot, C.M.

(2007) J Biological Chem 282: 17767-17776

Released	2007-04-10
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Ogataea angusta
Macromolecule	Peroxisomal copper amine oxidase (protein)
Unique Ligands	CU, GOL, XE

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3BNB \| pdb_00003bnb	Download File View File

Lipoxygenase-1 (Soybean) I553L Mutant

Tomchick, D.R.

(2008) Proc Natl Acad Sci U S A 105: 1146-1151

Released	2008-04-01
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Glycine max
Macromolecule	Seed lipoxygenase-1 (protein)
Unique Ligands	FE

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3BNC \| pdb_00003bnc	Download File View File

Lipoxygenase-1 (Soybean) I553G Mutant

Tomchick, D.R.

(2008) Proc Natl Acad Sci U S A 105: 1146-1151

Released	2008-04-01
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Glycine max
Macromolecule	Seed lipoxygenase-1 (protein)
Unique Ligands	ACY, FE

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3BND \| pdb_00003bnd	Download File View File

Lipoxygenase-1 (Soybean), I553V Mutant

Tomchick, D.R.

(2008) Proc Natl Acad Sci U S A 105: 1146-1151

Released	2008-04-01
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Glycine max
Macromolecule	Seed lipoxygenase-1 (protein)
Unique Ligands	FE

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3BNE \| pdb_00003bne	Download File View File

Lipoxygenase-1 (Soybean) I553A Mutant

Tomchick, D.R.

(2008) Proc Natl Acad Sci U S A 105: 1146-1151

Released	2008-04-01
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Glycine max
Macromolecule	Seed lipoxygenase-1 (protein)
Unique Ligands	FE

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3HLX \| pdb_00003hlx	Download File View File

Crystal Structure of PqqC Active Site Mutant Y175F in Complex with PQQ

Puehringer, S., Schwarzenbacher, R.

(2010) Proteins 78: 2554-2562

Released	2010-05-12
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Macromolecule	Pyrroloquinoline-quinone synthase (protein)
Unique Ligands	CL, GOL, PQQ

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3HML \| pdb_00003hml	Download File View File

Crystal Structure of PqqC Active Site Mutant H154S in Complex with PQQ

Puehringer, S., Schwarzenbacher, R.

(2010) Proteins 78: 2554-2562

Released	2010-05-12
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Macromolecule	Pyrroloquinoline-quinone synthase (protein)
Unique Ligands	PQQ

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3HNH \| pdb_00003hnh	Download File View File

Crystal Structure of PqqC Active Site Mutant Y175S,R179S in complex with a reaction intermediate

Puehringer, S., Schwarzenbacher, R.

(2010) Proteins 78: 2554-2562

Released	2010-05-12
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Macromolecule	Pyrroloquinoline-quinone synthase (protein)
Unique Ligands	AHQ

1 to 25 of 55 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1A2V | pdb_00001a2v

1A71 | pdb_00001a71

1A72 | pdb_00001a72

1AXE | pdb_00001axe

1AXG | pdb_00001axg

1EKM | pdb_00001ekm

1F8N | pdb_00001f8n

1FGM | pdb_00001fgm

1FGO | pdb_00001fgo

1FGQ | pdb_00001fgq

1FGR | pdb_00001fgr

1FGT | pdb_00001fgt

1OTV | pdb_00001otv

1OTW | pdb_00001otw

1RJW | pdb_00001rjw

1ZDR | pdb_00001zdr

2OOV | pdb_00002oov

2OQE | pdb_00002oqe

3BNB | pdb_00003bnb

3BNC | pdb_00003bnc

3BND | pdb_00003bnd

3BNE | pdb_00003bne

3HLX | pdb_00003hlx

3HML | pdb_00003hml

3HNH | pdb_00003hnh