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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Kleinekathofer, U."

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Search Summary

This query matches 35 Structures.

Refinements

Structure Determination Methodology

experimental (35)

Scientific Name of Source Organism

	Bacteroides thetaiotaomicron VPI-5482 (11)
	Bacteroides thetaiotaomicron (5)
	Klebsiella oxytoca (5)
	Vibrio harveyi (5)
	Escherichia coli K-12 (3)
	Klebsiella pneumoniae (3)
	Pseudomonas aeruginosa PAO1 (2)
	Acinetobacter baumannii (1)
	Escherichia coli (1)
	Homo sapiens (1)

More...

Taxonomy

	Bacteria (34)
	Eukaryota (1)

Experimental Method

	X-RAY DIFFRACTION (31)
	ELECTRON MICROSCOPY (4)

Polymer Entity Type

Protein (35)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (11)
	2.0 - 2.5 (3)
	2.5 - 3.0 (9)
	3.0 - 3.5 (10)
	3.5 - 4.0 (1)

Release Date

	2015 - 2019 (25)
	2020 - 2024 (10)

Enzyme Classification Name

Isomerases (1)

Membrane Protein Annotation

	PDBTM (23)
	mpstruc (23)
	MemProtMD (19)
	OPM (14)

Symmetry Type

	Asymmetric (19)
	Cyclic (15)
	Dihedral (1)

SCOP Classification

Membrane and cell surface proteins and peptides (1)

AllSelected

1 to 25 of 35 Structures

Page 1 of 2

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4D51 \| pdb_00004d51	Download File View File

Crystal structure of CymA from Klebsiella oxytoca

van den Berg, B., Bhamidimarri, S.P., Kleinekathoefer, U., Winterhalter, M.

(2015) Proc Natl Acad Sci U S A 112: E2991-E2999

Released	2015-06-03
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Klebsiella oxytoca
Macromolecule	CYMA (protein)
Unique Ligands	C8E

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4D5B \| pdb_00004d5b	Download File View File

Crystal structure of CymA from Klebsiella oxytoca

van den Berg, B., Bhamidimarri, S.P., Kleinekathoefer, U., Winterhalter, M.

(2015) Proc Natl Acad Sci U S A 112: E2991-E2999

Released	2015-06-03
Method	X-RAY DIFFRACTION 1.702 Å
Organisms	Klebsiella oxytoca
Macromolecule	CYMA (protein)
Unique Ligands	C8E
Unique branched monosaccharides	GLC

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4D5D \| pdb_00004d5d	Download File View File

Crystal structure of CymA from Klebsiella oxytoca

van den Berg, B., Bhamidimarri, S.P., Kleinekathoefer, U., Winterhalter, M.

(2015) Proc Natl Acad Sci U S A 112: E2991-E2999

Released	2015-06-03
Method	X-RAY DIFFRACTION 1.902 Å
Organisms	Klebsiella oxytoca
Macromolecule	CYMA (protein)
Unique Ligands	C8E
Unique branched monosaccharides	GLC

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4RJW \| pdb_00004rjw	Download File View File

Crystal structure of Pseudomonas aeruginosa OprO

van den Berg, B.

(2015) Biophys J 109: 1429-1438

Released	2015-10-21
Method	X-RAY DIFFRACTION 1.52 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	Porin O (protein)
Unique Ligands	C8E

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4RJX \| pdb_00004rjx	Download File View File

Crystal structure of the OprO mutant protein F62Y/D114Y

van den Berg, B.

(2015) Biophys J 109: 1429-1438

Released	2015-10-21
Method	X-RAY DIFFRACTION 1.54 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	Porin O (protein)
Unique Ligands	C8E, PO4

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4V3G \| pdb_00004v3g	Download File View File

Crystal structure of CymA from Klebsiella oxytoca

van den Berg, B., Bhamidimarri, S.P., Kleinekathoefer, U., Winterhalter, M.

(2015) Proc Natl Acad Sci U S A 112: E2991-E2999

Released	2015-06-03
Method	X-RAY DIFFRACTION 2.513 Å
Organisms	Klebsiella oxytoca
Macromolecule	CYMA PROTEIN (protein)
Unique Ligands	C8E

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4V3H \| pdb_00004v3h	Download File View File

Crystal structure of CymA from Klebsiella oxytoca

van den Berg, B., Bhamidimarri, S.P., Kleinekathoefer, U., Winterhalter, M.

(2015) Proc Natl Acad Sci U S A 112: E2991-E2999

Released	2015-06-03
Method	X-RAY DIFFRACTION 1.83 Å
Organisms	Klebsiella oxytoca
Macromolecule	CYMA PROTEIN (protein)
Unique Ligands	C8E, NO3

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5FQ3 \| pdb_00005fq3	Download File View File

Crystal structure of the lipoprotein BT2262 from Bacteroides thetaiotaomicron

Glenwright, A.J., Pothula, K.R., Chorev, D.S., Basle, A., Robinson, C.V., Kleinekathoefer, U., Bolam, D.N., van den Berg, B.

(2017) Nature 541: 407-411

Released	2016-12-14
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Bacteroides thetaiotaomicron
Macromolecule	BT_2262 (protein)

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5FQ4 \| pdb_00005fq4	Download File View File

Crystal structure of the lipoprotein BT2263 from Bacteroides thetaiotaomicron

Glenwright, A.J., Pothula, K.R., Chorev, D.S., Basle, A., Robinson, C.V., Kleinekathoefer, U., Bolam, D.N., van den Berg, B.

(2017) Nature 541: 407-411

Released	2016-12-14
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Bacteroides thetaiotaomicron
Macromolecule	PUTATIVE LIPOPROTEIN (protein)
Unique Ligands	CA

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5FQ6 \| pdb_00005fq6	Download File View File

Crystal structure of the SusCD complex BT2261-2264 from Bacteroides thetaiotaomicron

Glenwright, A.J., Pothula, K.R., Chorev, D.S., Basle, A., Robinson, C.V., Kleinekathoefer, U., Bolam, D.N., van den Berg, B.

(2017) Nature 541: 407-411

Released	2016-12-21
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Bacteroides thetaiotaomicron
Macromolecule	BT_2261 (protein) PUTATIVE LIPOPROTEIN (protein) SUSC/RAGA FAMILY TONB-LINKED OUTER MEMBRANE PROTEIN (protein) UNCHARACTERIZED PROTEIN (protein)
Unique Ligands	CA, KR0, NA

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5FQ7 \| pdb_00005fq7	Download File View File

Crystal structure of the SusCD complex BT2261-2264 from Bacteroides thetaiotaomicron

Glenwright, A.J., Pothula, K.R., Chorev, D.S., Basle, A., Robinson, C.V., Kleinekathoefer, U., Bolam, D.N., van den Berg, B.

(2017) Nature 541: 407-411

Released	2016-12-21
Method	X-RAY DIFFRACTION 3.4 Å
Organisms	Bacteroides thetaiotaomicron
Macromolecule	BT_2261 (protein) BT_2262 (protein) BT_2263 (protein) BT_2264 (protein) PEPTIDE (protein)
Unique Ligands	MG, NA

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5FQ8 \| pdb_00005fq8	Download File View File

Crystal structure of the SusCD complex BT2261-2264 from Bacteroides thetaiotaomicron

Glenwright, A.J., Pothula, K.R., Chorev, D.S., Basle, A., Robinson, C.V., Kleinekathoefer, U., Bolam, D.N., van den Berg, B.

(2017) Nature 541: 407-411

Released	2016-12-21
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Bacteroides thetaiotaomicron
Macromolecule	Unique protein chains: 6
Unique Ligands	C8E, CA, KR0, MG

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5LX8 \| pdb_00005lx8	Download File View File

Crystal structure of BT1762

Basle, A.

(2017) Nature 541: 407-411

Released	2016-12-14
Method	X-RAY DIFFRACTION 1.76 Å
Organisms	Bacteroides thetaiotaomicron VPI-5482
Macromolecule	SusD homolog (protein)
Unique Ligands	NA, SO4

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5MDO \| pdb_00005mdo	Download File View File

Crystal structure of in vitro folded Chitoporin VhChip from Vibrio harveyi (crystal form I)

Zahn, M., van den Berg, B.

(2018) Nat Commun 9: 220-220

Released	2017-12-20
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Vibrio harveyi
Macromolecule	Chitoporin (protein)
Unique Ligands	C8E, NA

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5MDP \| pdb_00005mdp	Download File View File

Crystal structure of in vitro folded Chitoporin VhChip from Vibrio harveyi (crystal form II)

Zahn, M., van den Berg, B.

(2018) Nat Commun 9: 220-220

Released	2017-12-20
Method	X-RAY DIFFRACTION 3.08 Å
Organisms	Vibrio harveyi
Macromolecule	Chitoporin (protein)

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5MDQ \| pdb_00005mdq	Download File View File

Crystal structure of outer membrane expressed Chitoporin VhChip from Vibrio harveyi

Zahn, M., van den Berg, B.

(2018) Nat Commun 9: 220-220

Released	2017-12-20
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Vibrio harveyi
Macromolecule	Chitoporin (protein)
Unique Ligands	NA

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5MDR \| pdb_00005mdr	Download File View File

Crystal structure of in vitro folded Chitoporin VhChip from Vibrio harveyi in complex with chitohexaose

Zahn, M., van den Berg, B.

(2018) Nat Commun 9: 220-220

Released	2017-12-20
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Vibrio harveyi
Macromolecule	Chitoporin (protein)
Unique Ligands	C8E, NA
Unique branched monosaccharides	NAG

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5MDS \| pdb_00005mds	Download File View File

Crystal structure of outer membrane expressed Chitoporin VhChip from Vibrio harveyi in complex with chitotetraose

Zahn, M., van den Berg, B.

(2018) Nat Commun 9: 220-220

Released	2017-12-20
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Vibrio harveyi
Macromolecule	Chitoporin (protein)
Unique branched monosaccharides	NAG

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5NUO \| pdb_00005nuo	Download File View File

Structural basis for maintenance of bacterial outer membrane lipid asymmetry

Abellon-Ruiz, J., Kaptan, S.S., Basle, A., Claudi, B., Bumann, D., Kleinekathofer, U., van den Berg, B.

(2017) Nat Microbiol 2: 1616-1623

Released	2017-10-25
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Escherichia coli K-12 Klebsiella pneumoniae
Macromolecule	ABC transporter permease (protein) Outer membrane protein F (protein)
Unique Ligands	C8E, SO4

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5NUP \| pdb_00005nup	Download File View File

Structural basis for maintenance of bacterial outer membrane lipid asymmetry

Abellon-Ruiz, J., Kaptan, S.S., Basle, A., Claudi, B., Bumann, D., Kleinekathofer, U., van den Berg, B.

(2017) Nat Microbiol 2: 1616-1623

Released	2017-10-25
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Klebsiella pneumoniae
Macromolecule	ABC transporter permease (protein) OmpK36 (protein)
Unique Ligands	C8E, LMT

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5NUQ \| pdb_00005nuq	Download File View File

Structural basis for maintenance of bacterial outer membrane lipid asymmetry

Abellon-Ruiz, J., Kaptan, S.S., Basle, A., Claudi, B., Bumann, D., Kleinekathofer, U., van den Berg, B.

(2017) Nat Microbiol 2: 1616-1623

Released	2017-10-25
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Escherichia coli K-12 Serratia marcescens
Macromolecule	Outer membrane protein F (protein) Probable phospholipid-binding lipoprotein mlaA (protein)
Unique Ligands	C8E

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5NUR \| pdb_00005nur	Download File View File

Structural basis for maintenance of bacterial outer membrane lipid asymmetry

Abellon-Ruiz, J., Kaptan, S.S., Basle, A., Claudi, B., Bumann, D., Kleinekathofer, U., van den Berg, B.

(2017) Nat Microbiol 2: 1616-1623

Released	2017-10-25
Method	X-RAY DIFFRACTION 3.29 Å
Organisms	Escherichia coli K-12 Klebsiella pneumoniae
Macromolecule	ABC transporter permease (protein) Outer membrane protein F (protein)
Unique Ligands	C8E, CA, SO4
Unique branched monosaccharides	GP1, KDO, Z9M

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5T3R \| pdb_00005t3r	Download File View File

Crystal structure of BT1762-1763

van den Berg, B.

(2017) Nature 541: 407-411

Released	2016-12-14
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Bacteroides thetaiotaomicron VPI-5482
Macromolecule	SusC homolog (protein) SusD homolog (protein)
Unique Ligands	MG, NA

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5T4Y \| pdb_00005t4y	Download File View File

Crystal structure of BT1762-1763

van den Berg, B.

(2017) Nature 541: 407-411

Released	2016-12-14
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Bacteroides thetaiotaomicron VPI-5482
Macromolecule	SusC homolog (protein) SusD homolog (protein)
Unique Ligands	MG