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234,440 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Katona, G."

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Search Summary

This query matches 93 Structures.

Refinements

Structure Determination Methodology

experimental (93)

Scientific Name of Source Organism

	Bos taurus (22)
	Blastochloris viridis (19)
	Homo sapiens (18)
	Gallus gallus (15)
	Cereibacter sphaeroides (4)
	Methylophilus methylotrophus (4)
	Sus scrofa (4)
	Desulfarculus baarsii (3)
	Astacus leptodactylus (2)
	Schistocerca gregaria (2)

More...

Taxonomy

	Eukaryota (62)
	Bacteria (31)
	other sequences (2)
	Eukaryota (eukaryotes) (1)

Experimental Method

	X-RAY DIFFRACTION (92)
	SOLUTION NMR (1)

Polymer Entity Type

Protein (93)

Refinement Resolution (Å)

	0.5 - 1.0 (2)
	1.0 - 1.5 (22)
	1.5 - 2.0 (35)
	2.0 - 2.5 (10)
	2.5 - 3.0 (14)
	3.0 - 3.5 (4)
	3.5 - 4.0 (4)
	> 4.5 (1)

Release Date

	2000 - 2004 (3)
	2005 - 2009 (17)
	2010 - 2014 (23)
	2015 - 2019 (21)
	2020 - 2024 (29)

Enzyme Classification Name

	Hydrolases (45)
	Oxidoreductases (7)
	Transferases (4)

Membrane Protein Annotation

	MemProtMD (20)
	PDBTM (20)
	mpstruc (6)

Symmetry Type

	Asymmetric (82)
	Cyclic (6)
	Octahedral (3)
	Dihedral (2)

SCOP Classification

	All beta proteins (45)
	Membrane and cell surface proteins and peptides (15)
	All alpha proteins (24)
	Alpha and beta proteins (a+b) (17)
	Alpha and beta proteins (a/b) (5)
	Small proteins (4)
	Artifacts (5)

AllSelected

1 to 25 of 93 Structures

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1GVK \| pdb_00001gvk	Download File View File

Porcine pancreatic elastase acyl enzyme at 0.95 A resolution

Katona, G., Wilmouth, R.C., Wright, P.A., Berglund, G.I., Hajdu, J., Neutze, R., Schofield, C.J.

(2002) J Biological Chem 277: 21962

Released	2002-07-19
Method	X-RAY DIFFRACTION 0.94 Å
Organisms	Sus scrofa synthetic construct
Macromolecule	ELASTASE 1 (protein) PEPTIDE INHIBITOR (protein)
Unique Ligands	CA, SO4

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1H4W \| pdb_00001h4w	Download File View File

Structure of human trypsin IV (brain trypsin)

Katona, G., Berglund, G.I., Hajdu, J., Graf, L., Szilagyi, L.

(2002) J Mol Biology 315: 1209-1218

Released	2002-02-11
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	TRYPSIN IVA (protein)
Unique Ligands	BEN, CA

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1OGV \| pdb_00001ogv	Download File View File

Lipidic cubic phase crystal structure of the photosynthetic reaction centre from Rhodobacter sphaeroides

Katona, G., Andreasson, U., Landau, E.M., Andreasson, L.-E., Neutze, R.

(2003) J Mol Biology 331: 681

Released	2003-08-05
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Cereibacter sphaeroides
Macromolecule	Reaction center protein H chain (protein) Reaction center protein L chain (protein) Reaction center protein M chain (protein)
Unique Ligands	BCL, BPH, CDL, CL, FE2, U10

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2BDA \| pdb_00002bda	Download File View File

Porcine pancreatic elastase complexed with N-acetyl-NPI and Ala-Ala at pH 5.0

Liu, B., Schofield, C.J., Wilmouth, R.C.

(2006) J Biological Chem 281: 24024-24035

Released	2006-05-30
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens Sus scrofa
Macromolecule	Chymotrypsin-like elastase family member 1 (protein) NPI (protein)
Unique Ligands	CA, SO4

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2BDB \| pdb_00002bdb	Download File View File

Porcine pancreatic elastase complexed with Asn-Pro-Ile and Ala-Ala at pH 5.0

Liu, B., Schofield, C.J., Wilmouth, R.C.

(2006) J Biological Chem 281: 24024-24035

Released	2006-05-30
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Sus scrofa
Macromolecule	Elastase-1 (protein)
Unique Ligands	ALA, CA, SO4

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2BDC \| pdb_00002bdc	Download File View File

Porcine pancreatic elastase complexed with Asn-Pro-Ile at pH 5.0

Liu, B., Schofield, C.J., Wilmouth, R.C.

(2006) J Biological Chem 281: 24024-24035

Released	2006-05-30
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Sus scrofa
Macromolecule	Elastase-1 (protein)
Unique Ligands	CA, SO4

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2BNP \| pdb_00002bnp	Download File View File

Lipidic cubic phase grown reaction centre from Rhodobacter sphaeroides, ground state

Katona, G., Snijder, A., Gourdon, P., Andreasson, U., Hansson, O., Andreasson, L.E., Neutze, R.

(2005) Nat Struct Mol Biol 12: 630

Released	2005-05-27
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Cereibacter sphaeroides
Macromolecule	Reaction center protein H chain (protein) Reaction center protein L chain (protein) Reaction center protein M chain (protein)
Unique Ligands	BCL, BPH, CL, FE2, MST, PO4, U10

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2BNS \| pdb_00002bns	Download File View File

Lipidic cubic phase grown reaction centre from Rhodobacter sphaeroides, excited state

Katona, G., Snijder, A., Gourdon, P., Andreasson, U., Hansson, O., Andreasson, L.E., Neutze, R.

(2005) Nat Struct Mol Biol 12: 630

Released	2005-05-27
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Cereibacter sphaeroides
Macromolecule	Reaction center protein H chain (protein) Reaction center protein L chain (protein) Reaction center protein M chain (protein)
Unique Ligands	BCL, BPH, CL, FE2, MST, PO4, U10

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2F91 \| pdb_00002f91	Download File View File

1.2A resolution structure of a crayfish trypsin complexed with a peptide inhibitor, SGTI

Fodor, K., Harmat, V., Hetenyi, C., Kardos, J., Antal, J., Perczel, A., Patthy, A., Katona, G., Graf, L.

(2006) Biochemistry 45: 2114-2121

Released	2006-04-18
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Astacus leptodactylus Schistocerca gregaria
Macromolecule	Serine protease inhibitor I/II (protein) hepatopancreas trypsin (protein)
Unique Ligands	CD, CL

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2GNU \| pdb_00002gnu	Download File View File

The crystallization of reaction center from Rhodobacter sphaeroides occurs via a new route

Wadsten, P., Woehri, A.B., Snijder, A., Katona, G., Gardiner, A.T., Cogdell, R.J., Neutze, R., Engstroem, S.

(2006) J Mol Biology 364: 44-53

Released	2006-11-07
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Cereibacter sphaeroides
Macromolecule	Reaction center protein H chain (protein) Reaction center protein L chain (protein) Reaction center protein M chain (protein)
Unique Ligands	BCL, BPH, CDL, CL, FE2, LDA, U10

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2JET \| pdb_00002jet	Download File View File

Crystal structure of a trypsin-like mutant (S189D , A226G) chymotrypsin.

Jelinek, B., Katona, G., Fodor, K., Venekei, I., Graf, L.

(2008) Protein J 27: 79

Released	2007-09-18
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Rattus norvegicus
Macromolecule	CHYMOTRYPSINOGEN B CHAIN A (protein) CHYMOTRYPSINOGEN B CHAIN B (protein) CHYMOTRYPSINOGEN B CHAIN C (protein)

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2JI1 \| pdb_00002ji1	Download File View File

X-ray structure of wild-type superoxide reductase from Desulfoarculus baarsii

Katona, G., Carpentier, P., Niviere, V., Amara, P., Adam, V., Ohana, J., Tsanov, N., Bourgeois, D.

(2007) Science 316: 449-453

Released	2007-05-01
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Desulfarculus baarsii
Macromolecule	Desulfoferrodoxin (protein)
Unique Ligands	CA, FE, FE2

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2JI2 \| pdb_00002ji2	Download File View File

X-ray structure of E114A mutant of superoxide reductase from Desulfoarculus baarsii in the native, reduced form

Katona, G., Carpentier, P., Niviere, V., Amara, P., Adam, V., Ohana, J., Tsanov, N., Bourgeois, D.

(2007) Science 316: 449-453

Released	2007-05-01
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Desulfarculus baarsii
Macromolecule	Desulfoferrodoxin (protein)
Unique Ligands	CA, FE, FE2, NO3

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2JI3 \| pdb_00002ji3	Download File View File

X-ray structure of the iron-peroxide intermediate of superoxide reductase (E114A mutant) from Desulfoarculus baarsii

Katona, G., Carpentier, P., Niviere, V., Amara, P., Adam, V., Ohana, J., Tsanov, N., Bourgeois, D.

(2007) Science 316: 449-453

Released	2007-05-01
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Desulfarculus baarsii
Macromolecule	Desulfoferrodoxin (protein)
Unique Ligands	CA, FE, NO3, PER

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2WJM \| pdb_00002wjm	Download File View File

Lipidic sponge phase crystal structure of the photosynthetic reaction centre from Blastochloris viridis (low dose)

Woehri, A.B., Wahlgren, W.Y., Malmerberg, E., Johansson, L.C., Neutze, R., Katona, G.

(2009) Biochemistry 48: 9831-9838

Released	2009-09-22
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Blastochloris viridis
Macromolecule	PHOTOSYNTHETIC REACTION CENTER CYTOCHROME C SUBUNIT (protein) REACTION CENTER PROTEIN H CHAIN (protein) REACTION CENTER PROTEIN L CHAIN (protein) REACTION CENTER PROTEIN M CHAIN (protein)
Unique Ligands	BCB, BPB, DGA, FE2, HEC, MPG, MQ7, NS5, PO4

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2WJN \| pdb_00002wjn	Download File View File

Lipidic sponge phase crystal structure of photosynthetic reaction centre from Blastochloris viridis (high dose)

Wohri, A.B., Wahlgren, W.Y., Malmerberg, E., Johansson, L.C., Neutze, R., Katona, G.

(2009) Biochemistry 48: 9831-9838

Released	2009-09-22
Method	X-RAY DIFFRACTION 1.86 Å
Organisms	Blastochloris viridis
Macromolecule	PHOTOSYNTHETIC REACTION CENTER CYTOCHROME C SUBUNIT (protein) REACTION CENTER PROTEIN H CHAIN (protein) REACTION CENTER PROTEIN L CHAIN (protein) REACTION CENTER PROTEIN M CHAIN (protein)
Unique Ligands	BCB, BPB, FE2, HEC, MPG, MQ7, NS5

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2X5U \| pdb_00002x5u	Download File View File

80 microsecond Laue diffraction snapshot from crystals of a photosynthetic reaction centre without illumination.

Wohri, A.B., Katona, G., Johansson, L.C., Fritz, E., Malmerberg, E., Andersson, M., Vincent, J., Eklund, M., Cammarata, M., Wulff, M., Davidsson, J., Groenhof, G., Neutze, R.

(2010) Science 328: 630-633

Released	2010-05-12
Method	X-RAY DIFFRACTION 3 Å
Organisms	Blastochloris viridis
Macromolecule	PHOTOSYNTHETIC REACTION CENTER CYTOCHROME C SUBUNIT (protein) REACTION CENTER PROTEIN H CHAIN (protein) REACTION CENTER PROTEIN L CHAIN (protein) REACTION CENTER PROTEIN M CHAIN (protein)
Unique Ligands	BCB, BPB, FE2, HEC, MQ7

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2X5V \| pdb_00002x5v	Download File View File

80 microsecond laue diffraction snapshot from crystals of a photosynthetic reaction centre 3 millisecond following photoactivation.

Wohri, A.B., Katona, G., Johansson, L.C., Fritz, E., Malmerberg, E., Andersson, M., Vincent, J., Eklund, M., Cammarata, M., Wulff, M., Davidsson, J., Groenhof, G., Neutze, R.

(2010) Science 328: 630

Released	2010-05-12
Method	X-RAY DIFFRACTION 3 Å
Organisms	Blastochloris viridis
Macromolecule	PHOTOSYNTHETIC REACTION CENTER CYTOCHROME C SUBUNIT (protein) REACTION CENTER PROTEIN H CHAIN (protein) REACTION CENTER PROTEIN L CHAIN (protein) REACTION CENTER PROTEIN M CHAIN (protein)
Unique Ligands	BCB, BPB, FE2, HEC, MQ7

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2XQQ \| pdb_00002xqq	Download File View File

Human dynein light chain (DYNLL2) in complex with an in vitro evolved peptide (Ac-SRGTQTE).

Rapali, P., Radnai, L., Suveges, D., Hetenyi, C., Harmat, V., Tolgyesi, F., Wahlgren, W.Y., Katona, G., Nyitray, L., Pal, G.

(2011) PLoS One 6: 18818

Released	2011-05-04
Method	X-RAY DIFFRACTION 1.31 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	DYNEIN LIGHT CHAIN 2, CYTOPLASMIC (protein) SAC-ARG-GLY-THR-GLN-THR-GLU (protein)
Unique Ligands	ACT

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2XTT \| pdb_00002xtt	Download File View File

Bovine trypsin in complex with evolutionary enhanced Schistocerca gregaria protease inhibitor 1 (SGPI-1-P02)

Wahlgren, W.Y., Pal, G., Kardos, J., Porrogi, P., Szenthe, B., Patthy, A., Graf, L., Katona, G.

(2011) J Biological Chem 286: 3587-3596

Released	2010-11-10
Method	X-RAY DIFFRACTION 0.93 Å
Organisms	Bos taurus Schistocerca gregaria
Macromolecule	CATIONIC TRYPSIN (protein) PROTEASE INHIBITOR SGPI-1 (protein)
Unique Ligands	ACT, CA

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3CLR \| pdb_00003clr	Download File View File

Crystal structure of the R236A ETF mutant from M. methylotrophus

Katona, G., Leys, D.

(2008) Biochemistry 47: 5168-5181

Released	2008-04-08
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Methylophilus methylotrophus
Macromolecule	Electron transfer flavoprotein subunit alpha (protein) Electron transfer flavoprotein subunit beta (protein)
Unique Ligands	AMP, FAD, PO4

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3CLS \| pdb_00003cls	Download File View File

Crystal structure of the R236C mutant of ETF from Methylophilus methylotrophus

Katona, G., Leys, D.

(2008) Biochemistry 47: 5168-5181

Released	2008-04-08
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Methylophilus methylotrophus
Macromolecule	Electron transfer flavoprotein subunit alpha (protein) Electron transfer flavoprotein subunit beta (protein)
Unique Ligands	AMP, FAD

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3CLT \| pdb_00003clt	Download File View File

Crystal structure of the R236E mutant of Methylophilus methylotrophus ETF

Katona, G., Leys, D.

(2008) Biochemistry 47: 5168-5181

Released	2008-04-08
Method	X-RAY DIFFRACTION 2 Å
Organisms	Methylophilus methylotrophus
Macromolecule	Electron transfer flavoprotein subunit alpha (protein) Electron transfer flavoprotein subunit beta (protein)
Unique Ligands	AMP, FAD

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3CLU \| pdb_00003clu	Download File View File

Crystal structure of the R236K mutant from Methylophilus methylotrophus ETF

Katona, G., Leys, D.

(2008) Biochemistry 47: 5168-5181

Released	2008-04-08
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Methylophilus methylotrophus
Macromolecule	Electron transfer flavoprotein subunit alpha (protein) Electron transfer flavoprotein subunit beta (protein)
Unique Ligands	AMP, FAD

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3P8M \| pdb_00003p8m	Download File View File

Human dynein light chain (DYNLL2) in complex with an in vitro evolved peptide dimerized by leucine zipper

Rapali, P., Radnai, L., Suveges, D., Hetenyi, C., Harmat, V., Tolgyesi, F., Wahlgren, W.Y., Katona, G., Nyitray, L., Pal, G.

(2011) PLoS One 6: e18818-e18818

Released	2011-08-31
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens Saccharomyces cerevisiae
Macromolecule	Dynein light chain 2 (protein) General control protein GCN4 (protein)

1 to 25 of 93 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1GVK | pdb_00001gvk

1H4W | pdb_00001h4w

1OGV | pdb_00001ogv

2BDA | pdb_00002bda

2BDB | pdb_00002bdb

2BDC | pdb_00002bdc

2BNP | pdb_00002bnp

2BNS | pdb_00002bns

2F91 | pdb_00002f91

2GNU | pdb_00002gnu

2JET | pdb_00002jet

2JI1 | pdb_00002ji1

2JI2 | pdb_00002ji2

2JI3 | pdb_00002ji3

2WJM | pdb_00002wjm

2WJN | pdb_00002wjn

2X5U | pdb_00002x5u

2X5V | pdb_00002x5v

2XQQ | pdb_00002xqq

2XTT | pdb_00002xtt

3CLR | pdb_00003clr

3CLS | pdb_00003cls

3CLT | pdb_00003clt

3CLU | pdb_00003clu

3P8M | pdb_00003p8m