RCSB PDB: Search

AllSelected

2E6Y \| pdb_00002e6y	Download File View File

Covalent complex of orotidine 5'-monophosphate decarboxylase (ODCase) with 6-Iodo-UMP

Fujihashi, M., Bello, A.M., Kotra, L.P., Pai, E.F.

(2007) J Med Chem 50: 915-921

Released	2007-02-27
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	Orotidine 5'-phosphate decarboxylase (protein)
Unique Ligands	GOL, U5P

Explore in 3D

2Q8Z \| pdb_00002q8z	Download File View File

Crystal structure of Plasmodium falciparum orotidine 5'-phosphate decarboxylase complexed with 6-amino-UMP

Liu, Y., Lau, W., Bello, A.M., Kotra, L.P., Hui, R., Pai, E.F.

(2008) J Med Chem 51: 439-448

Released	2008-01-29
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Plasmodium falciparum 3D7
Macromolecule	Orotidine-monophosphate-decarboxylase (protein)
Unique Ligands	7PE, NUP, PEG, SO4

Explore in 3D

2QAF \| pdb_00002qaf	Download File View File

Crystal structure of Plasmodium falciparum orotidine 5'-phosphate decarboxylase covalently modified by 6-iodo-UMP

Liu, Y., Lau, W., Bello, A.M., Kotra, L.P., Hui, R., Pai, E.F.

(2008) J Med Chem 51: 439-448

Released	2008-04-29
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Plasmodium falciparum 3D7
Macromolecule	Orotidine 5' monophosphate decarboxylase (protein)
Unique Ligands	SO4, U5P

Explore in 3D

3BAR \| pdb_00003bar	Download File View File

Crystal structure of Plasmodium falciparum orotidine 5'-phosphate decarboxylase covalently modified by 6-azido-UMP

Liu, Y., Bello, A.M., Poduch, E., Lau, W., Kotra, L.P., Pai, E.F.

(2008) J Med Chem 51: 439-448

Released	2008-01-29
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Plasmodium falciparum 3D7
Macromolecule	Orotidine 5'-phosphate decarboxylase (protein)
Unique Ligands	U5P

Explore in 3D

3MO7 \| pdb_00003mo7	Download File View File

Crystal structure of human orotidine 5'-monophosphate decarboxylase covalently modified by 2'-fluoro-6-iodo-UMP

Liu, Y., Kotra, L.P., Pai, E.F.

(2011) J Med Chem 54: 2891-2901

Released	2011-04-06
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Homo sapiens
Macromolecule	Uridine 5'-monophosphate synthase (protein)
Unique Ligands	GOL, UFT

Explore in 3D

4HIB \| pdb_00004hib	Download File View File

Crystal structure of human orotidine 5'-monophosphate decarboxylase complexed with CMP-N4-OH

To, T.K., Kotra, L.P., Pai, E.F.

(2012) J Med Chem 55: 9988-9997

Released	2012-11-14
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	Uridine 5'-monophosphate synthase (protein)
Unique Ligands	16B, CL, GOL

Explore in 3D

4HKP \| pdb_00004hkp	Download File View File

Crystal structure of human orotidine 5'-monophosphate decarboxylase complexed with CMP-N3-oxide

To, T.K., Kotra, L.P., Pai, E.F.

(2012) J Med Chem 55: 9988-9997

Released	2012-11-14
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Homo sapiens
Macromolecule	Uridine 5'-monophosphate synthase (protein)
Unique Ligands	16B, GOL, TKW

2E6Y | pdb_00002e6y

Covalent complex of orotidine 5'-monophosphate decarboxylase (ODCase) with 6-Iodo-UMP

2Q8Z | pdb_00002q8z

Crystal structure of Plasmodium falciparum orotidine 5'-phosphate decarboxylase complexed with 6-amino-UMP

2QAF | pdb_00002qaf

Crystal structure of Plasmodium falciparum orotidine 5'-phosphate decarboxylase covalently modified by 6-iodo-UMP

3BAR | pdb_00003bar

Crystal structure of Plasmodium falciparum orotidine 5'-phosphate decarboxylase covalently modified by 6-azido-UMP

3MO7 | pdb_00003mo7

Crystal structure of human orotidine 5'-monophosphate decarboxylase covalently modified by 2'-fluoro-6-iodo-UMP

4HIB | pdb_00004hib

Crystal structure of human orotidine 5'-monophosphate decarboxylase complexed with CMP-N4-OH

4HKP | pdb_00004hkp

Crystal structure of human orotidine 5'-monophosphate decarboxylase complexed with CMP-N3-oxide

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

2E6Y | pdb_00002e6y

Covalent complex of orotidine 5'-monophosphate decarboxylase (ODCase) with 6-Iodo-UMP

2Q8Z | pdb_00002q8z

Crystal structure of Plasmodium falciparum orotidine 5'-phosphate decarboxylase complexed with 6-amino-UMP

2QAF | pdb_00002qaf

Crystal structure of Plasmodium falciparum orotidine 5'-phosphate decarboxylase covalently modified by 6-iodo-UMP

3BAR | pdb_00003bar

Crystal structure of Plasmodium falciparum orotidine 5'-phosphate decarboxylase covalently modified by 6-azido-UMP

3MO7 | pdb_00003mo7

Crystal structure of human orotidine 5'-monophosphate decarboxylase covalently modified by 2'-fluoro-6-iodo-UMP

4HIB | pdb_00004hib

Crystal structure of human orotidine 5'-monophosphate decarboxylase complexed with CMP-N4-OH

4HKP | pdb_00004hkp

Crystal structure of human orotidine 5'-monophosphate decarboxylase complexed with CMP-N3-oxide