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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Crenne, J.Y."

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Search Summary

This query matches 43 Structures.

Refinements

Structure Determination Methodology

experimental (43)

Scientific Name of Source Organism

	Pyrococcus furiosus DSM 3638 (16)
	Streptantibioticus cattleyicolor (5)
	Ignisphaera aggregans DSM 17230 (3)
	Pyrococcus furiosus (3)
	Caldicellulosiruptor hydrothermalis (2)
	Nocardia uniformis subsp. tsuyamanensis (2)
	Priestia megaterium (2)
	Rhodothermus marinus (2)
	Thermobifida fusca (2)
	Aspergillus flavus (1)

More...

Taxonomy

	Archaea (24)
	Bacteria (17)
	Eukaryota (2)

Experimental Method

X-RAY DIFFRACTION (43)

Polymer Entity Type

Protein (43)

Refinement Resolution (Å)

	1.0 - 1.5 (6)
	1.5 - 2.0 (24)
	2.0 - 2.5 (9)
	2.5 - 3.0 (4)

Release Date

	2010 - 2014 (6)
	2015 - 2019 (27)
	2020 - 2024 (9)
	2025 - 2029 (1)

Enzyme Classification Name

	Lyases (23)
	Oxidoreductases (8)
	Transferases (5)
	Hydrolases (2)

Symmetry Type

	Cyclic (32)
	Asymmetric (9)
	Dihedral (10)

SCOP Classification

	Alpha and beta proteins (a/b) (21)
	All alpha proteins (8)
	Artifacts (5)

AllSelected

1 to 25 of 43 Structures

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3S3U \| pdb_00003s3u	Download File View File

Crystal Structure of Uncleaved ThnT T282C

Schildbach, J.F., Wright, N.T., Buller, A.R.

(2012) Proc Natl Acad Sci U S A 109: 2308-2313

Released	2012-02-01
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Streptantibioticus cattleyicolor
Macromolecule	cysteine transferase (protein)

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3TM1 \| pdb_00003tm1	Download File View File

Crystal structure of mature ThnT, a pantetheine hydrolase

Schildbach, J.F., Wright, N.T., Buller, A.R.

(2012) J Mol Biology 422: 508-518

Released	2012-07-04
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Streptantibioticus cattleyicolor
Macromolecule	cysteine transferase (protein)
Unique Ligands	GOL

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3TM2 \| pdb_00003tm2	Download File View File

Crystal structure of mature ThnT with a covalently bound product mimic

Schildbach, J.F., Wright, N.T., Buller, A.R.

(2012) J Mol Biology 422: 508-518

Released	2012-07-04
Method	X-RAY DIFFRACTION 2 Å
Organisms	Streptantibioticus cattleyicolor
Macromolecule	cysteine transferase (protein)
Unique Ligands	TXI

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4IHD \| pdb_00004ihd	Download File View File

Crystal Structure of Uncleaved ThnT T282C, derivatized at the active site with EtHg

Buller, A.R., Schildbach, J.F., Townsend, C.A.

(2014) Biochemistry 53: 4273-4281

Released	2014-08-13
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Streptantibioticus cattleyicolor
Macromolecule	ThnT protein (protein)
Unique Ligands	EMC

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4IHE \| pdb_00004ihe	Download File View File

Crystal Structure of Uncleaved ThnT T282A

Buller, A.R., Schildbach, J.F., Townsend, C.A.

(2014) Biochemistry 53: 4273-4281

Released	2014-08-13
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Streptantibioticus cattleyicolor
Macromolecule	ThnT protein (protein)

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4WG2 \| pdb_00004wg2	Download File View File

P411BM3-CIS T438S I263F regioselective C-H amination catalyst

Hyster, T.K., Farwell, C.C., Buller, A.R., McIntosh, J.A., Arnold, F.H.

(2014) J Am Chem Soc 136: 15505-15508

Released	2014-11-05
Method	X-RAY DIFFRACTION 2.66 Å
Organisms	Priestia megaterium
Macromolecule	Bifunctional P-450/NADPH-P450 reductase (protein)
Unique Ligands	HEM, SO4

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4XDY \| pdb_00004xdy	Download File View File

Structure of NADH-preferring ketol-acid reductoisomerase from an uncultured archean

Cahn, J.K.B., Brinkmann-Chen, S., Arnold, F.H.

(2015) Biochem J 468: 475-484

Released	2015-04-22
Method	X-RAY DIFFRACTION 1.535 Å
Organisms	Candidatus Methanophaga sp.
Macromolecule	Ketol-acid reductoisomerase (protein)
Unique Ligands	GOL, HIO, MG, NAI

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4XDZ \| pdb_00004xdz	Download File View File

Holo structure of ketol-acid reductoisomerase from Ignisphaera aggregans

Cahn, J.K.B., Brinkmann-Chen, S., Arnold, F.H.

(2015) Biochem J 468: 475-484

Released	2015-04-22
Method	X-RAY DIFFRACTION 1.15 Å
Organisms	Ignisphaera aggregans DSM 17230
Macromolecule	Ketol-acid reductoisomerase (protein)
Unique Ligands	40E, EPE, GOL, MG, NDP

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4XEH \| pdb_00004xeh	Download File View File

Apo structure of KARI from Ignisphaera aggregans

Cahn, J.K.B., Brinkmann-Chen, S., Arnold, F.H.

(2015) Biochem J 468: 475-484

Released	2015-04-22
Method	X-RAY DIFFRACTION 1.391 Å
Organisms	Ignisphaera aggregans DSM 17230
Macromolecule	Ketol-acid reductoisomerase (protein)

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4XIY \| pdb_00004xiy	Download File View File

Crystal structure of ketol-acid reductoisomerase from Azotobacter

Spatzal, T., Cahn, J.K.B., Wiig, J.A., Einsle, O., Hu, Y., Ribbe, M.W., Arnold, F.H.

(2015) Biochem J 468: 475-484

Released	2015-04-22
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Azotobacter vinelandii DJ
Macromolecule	Ketol-acid reductoisomerase (protein)
Unique Ligands	FE, MG, PEG, PG4, PGE

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5BV5 \| pdb_00005bv5	Download File View File

Structure of CYP119 with T213A and C317H mutations

Buller, A.R., Heel, T., McIntosh, J.A., Arnold, F.H.

(2015) J Am Chem Soc 137: 13861-13865

Released	2016-02-03
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Saccharolobus solfataricus
Macromolecule	Cytochrome P450 119 (protein)
Unique Ligands	HEM, PIM, PO4

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5DVZ \| pdb_00005dvz	Download File View File

Holo TrpB from Pyrococcus furiosus

Buller, A.R., Arnold, F.H.

(2015) Proc Natl Acad Sci U S A 112: 14599-14604

Released	2016-02-03
Method	X-RAY DIFFRACTION 1.69 Å
Organisms	Pyrococcus furiosus DSM 3638
Macromolecule	Tryptophan synthase beta chain 1 (protein)
Unique Ligands	NA, PO4

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5DW0 \| pdb_00005dw0	Download File View File

TrpB from Pyrococcus furiosus with L-serine bound as the external aldimine

Buller, A.R., Arnold, F.H.

(2015) Proc Natl Acad Sci U S A 112: 14599-14604

Released	2015-11-11
Method	X-RAY DIFFRACTION 2.01 Å
Organisms	Pyrococcus furiosus DSM 3638
Macromolecule	Tryptophan synthase beta chain 1 (protein)
Unique Ligands	NA, PLS

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5DW3 \| pdb_00005dw3	Download File View File

Tryptophan Synthase beta-subunit from Pyrococcus furiosus with product L-tryptophan non-covalently bound in the active site

Buller, A.R., Arnold, F.H.

(2015) Proc Natl Acad Sci U S A 112: 14599-14604

Released	2015-11-11
Method	X-RAY DIFFRACTION 1.74 Å
Organisms	Pyrococcus furiosus DSM 3638
Macromolecule	Tryptophan synthase beta chain 1 (protein)
Unique Ligands	NA, PO4, TRP

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5E0K \| pdb_00005e0k	Download File View File

X-ray crystal structure of tryptophan synthase complex from Pyrococcus furiosus at 2.76 A

Buller, A.R., Murciano-Calles, J., Arnold, F.H.

(2015) Proc Natl Acad Sci U S A 112: 14599-14604

Released	2015-11-11
Method	X-RAY DIFFRACTION 2.76 Å
Organisms	Pyrococcus furiosus DSM 3638
Macromolecule	Tryptophan synthase alpha chain (protein) Tryptophan synthase beta chain 1 (protein)
Unique Ligands	PO4

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5E4R \| pdb_00005e4r	Download File View File

Crystal structure of domain-duplicated synthetic class II ketol-acid reductoisomerase 2Ia_KARI-DD

Cahn, J.K.B., Brinkmann-Chen, S., Buller, A.R., Arnold, F.H.

(2016) Protein Sci 25: 1241-1248

Released	2015-12-23
Method	X-RAY DIFFRACTION 1.94 Å
Organisms	Ignisphaera aggregans DSM 17230
Macromolecule	Ketol-acid reductoisomerase (protein)
Unique Ligands	40E, EDO, GOL, MG, NAP

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5IXJ \| pdb_00005ixj	Download File View File

Tryptophan Synthase beta-subunit from Pyrococcus furiosus with L-threonine non-covalently bound in the active site

Buller, A.R., Herger, M., Arnold, F.H.

(2016) J Am Chem Soc 138: 8388-8391

Released	2016-08-17
Method	X-RAY DIFFRACTION 1.54 Å
Organisms	Pyrococcus furiosus DSM 3638
Macromolecule	Tryptophan synthase beta chain 1 (protein)
Unique Ligands	NA, THR

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5T6M \| pdb_00005t6m	Download File View File

Structure of the tryptophan synthase b-subunit from Pyroccus furiosus with b-methyltryptophan non-covalently bound

Buller, A.R., van Roye, P., Arnold, F.H.

(2016) Biochemistry 55: 7043-7046

Released	2016-12-21
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Pyrococcus furiosus
Macromolecule	Tryptophan synthase beta chain 1 (protein)
Unique Ligands	78U, NA, PO4

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5UCW \| pdb_00005ucw	Download File View File

Cytochrome P411 P-4 A82L A78V F263L amination catalyst

Zhang, R.K., Buller, A.R., Arnold, F.H.

(2017) Nat Chem 9: 629-634

Released	2017-05-17
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Priestia megaterium
Macromolecule	NADPH-cytochrome P450 reductase 102A1V3 (protein)
Unique Ligands	HEM

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5VM5 \| pdb_00005vm5	Download File View File

Engineered tryptophan synthase b-subunit from Pyrococcus furiosus, PfTrpB2B9, with Ser bound

Buller, A.R., van Roye, P.

(2018) J Am Chem Soc 140: 7256-7266

Released	2017-05-24
Method	X-RAY DIFFRACTION 1.67 Å
Organisms	Pyrococcus furiosus DSM 3638
Macromolecule	Tryptophan synthase beta chain 1 (protein)
Unique Ligands	0JO, NA, PLS

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6AM7 \| pdb_00006am7	Download File View File

Engineered tryptophan synthase b-subunit from Pyrococcus furiosus, PfTrpB2B9

Buller, A.R., van Roye, P.

(2018) J Am Chem Soc 140: 7256-7266

Released	2018-05-16
Method	X-RAY DIFFRACTION 1.47 Å
Organisms	Pyrococcus furiosus DSM 3638
Macromolecule	Tryptophan synthase beta chain 1 (protein)
Unique Ligands	NA, PO4

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6AM8 \| pdb_00006am8	Download File View File

Engineered tryptophan synthase b-subunit from Pyrococcus furiosus, PfTrpB2B9 with Trp bound as E(Aex2)

Buller, A.R., van Roye, P.

(2018) J Am Chem Soc 140: 7256-7266

Released	2018-05-16
Method	X-RAY DIFFRACTION 1.83 Å
Organisms	Pyrococcus furiosus DSM 3638
Macromolecule	Tryptophan synthase beta chain 1 (protein)
Unique Ligands	NA, PLT, TRP

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6AM9 \| pdb_00006am9	Download File View File

Engineered tryptophan synthase b-subunit from Pyrococcus furiosus, PfTrpB2B9, with Ser-bound in a predominantly closed state.

Buller, A.R., van Roye, P.

(2018) J Am Chem Soc 140: 7256-7266

Released	2018-05-16
Method	X-RAY DIFFRACTION 2.09 Å
Organisms	Pyrococcus furiosus DSM 3638
Macromolecule	Tryptophan synthase beta chain 1 (protein)
Unique Ligands	0JO, NA, PLS

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6AMC \| pdb_00006amc	Download File View File

Engineered tryptophan synthase b-subunit from Pyrococcus furiosus, PfTrpB4D11

Buller, A.R., Herger, M.

(2018) J Am Chem Soc 140: 7256-7266

Released	2018-05-16
Method	X-RAY DIFFRACTION 1.93 Å
Organisms	Pyrococcus furiosus DSM 3638
Macromolecule	Tryptophan synthase beta chain 1 (protein)
Unique Ligands	NA

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6AMH \| pdb_00006amh	Download File View File

Engineered tryptophan synthase b-subunit from Pyrococcus furiosus, PfTrpB4D11 with Ser bound as E(Aex1)

Buller, A.R.

(2018) J Am Chem Soc 140: 7256-7266

Released	2018-05-16
Method	X-RAY DIFFRACTION 1.63 Å
Organisms	Pyrococcus furiosus DSM 3638
Macromolecule	Tryptophan synthase beta chain 1 (protein)
Unique Ligands	NA, PLS

1 to 25 of 43 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

3S3U | pdb_00003s3u

3TM1 | pdb_00003tm1

3TM2 | pdb_00003tm2

4IHD | pdb_00004ihd

4IHE | pdb_00004ihe

4WG2 | pdb_00004wg2

4XDY | pdb_00004xdy

4XDZ | pdb_00004xdz

4XEH | pdb_00004xeh

4XIY | pdb_00004xiy

5BV5 | pdb_00005bv5

5DVZ | pdb_00005dvz

5DW0 | pdb_00005dw0

5DW3 | pdb_00005dw3

5E0K | pdb_00005e0k

5E4R | pdb_00005e4r

5IXJ | pdb_00005ixj

5T6M | pdb_00005t6m

5UCW | pdb_00005ucw

5VM5 | pdb_00005vm5

6AM7 | pdb_00006am7

6AM8 | pdb_00006am8

6AM9 | pdb_00006am9

6AMC | pdb_00006amc

6AMH | pdb_00006amh