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234,785 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Qu, Y."

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Search Summary

This query matches 8 Structures.

Refinements

Structure Determination Methodology

experimental (8)

Scientific Name of Source Organism

	Streptococcus pyogenes str. Manfredo (4)
	Cyriopagopus schmidti (1)
	Homo sapiens (1)
	Oryza sativa Indica Group (1)
	Oryza sativa Japonica Group (1)

Taxonomy

	Bacteria (4)
	Eukaryota (3)
	Eukaryota (eukaryotes) (1)

Experimental Method

	X-RAY DIFFRACTION (5)
	ELECTRON MICROSCOPY (2)
	SOLUTION NMR (1)

Polymer Entity Type

Protein (8)

Refinement Resolution (Å)

	1.5 - 2.0 (4)
	2.0 - 2.5 (2)
	2.5 - 3.0 (1)

Release Date

	1995 - 1999 (1)
	2005 - 2009 (1)
	2015 - 2019 (4)
	2020 - 2024 (2)

Enzyme Classification Name

Transferases (3)

Membrane Protein Annotation

	PDBTM (2)
	OPM (1)

Symmetry Type

	Asymmetric (5)
	Cyclic (3)
	Dihedral (1)

SCOP Classification

Small proteins (1)

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1 to 8 of 8 Structures

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1QK6 \| pdb_00001qk6	Download File View File

Solution structure of huwentoxin-I by NMR

Qu, Y., Liang, S., Ding, J., Liu, X., Zhang, R., Gu, X.

(1997) J Protein Chem 16: 565-574

Released	1999-08-20
Method	SOLUTION NMR
Organisms	Cyriopagopus schmidti
Macromolecule	HUWENTOXIN-I (protein)

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1RWE \| pdb_00001rwe	Download File View File

Enhancing the activity of insulin at receptor edge: crystal structure and photo-cross-linking of A8 analogues

Wan, Z., Xu, B., Chu, Y.C., Li, B., Nakagawa, S.H., Qu, Y., Hu, S.Q., Katsoyannis, P.G., Weiss, M.A.

(2004) Biochemistry 43: 16119-16133

Released	2005-02-15
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	Insulin (protein) insulin (protein)
Unique Ligands	CL, IPH, ZN

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5A35 \| pdb_00005a35	Download File View File

Crystal structure of Glycine Cleavage Protein H-Like (GcvH-L) from Streptococcus pyogenes

Rack, J.G.M., Morra, R., Barkauskaite, E., Kraehenbuehl, R., Ariza, A., Qu, Y., Ortmayer, M., Leidecker, O., Cameron, D.R., Matic, I., Peleg, A.Y., Leys, D., Traven, A., Ahel, I.

(2015) Mol Cell 59: 309

Released	2015-07-29
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Streptococcus pyogenes str. Manfredo
Macromolecule	GLYCINE CLEAVAGE SYSTEM H PROTEIN (protein)
Unique Ligands	1PE

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5A3A \| pdb_00005a3a	Download File View File

Crystal structure of the ADP-ribosylating sirtuin (SirTM) from Streptococcus pyogenes (Apo form)

Rack, J.G.M., Morra, R., Barkauskaite, E., Kraehenbuehl, R., Ariza, A., Qu, Y., Ortmayer, M., Leidecker, O., Cameron, D.R., Matic, I., Peleg, A.Y., Leys, D., Traven, A., Ahel, I.

(2015) Mol Cell 59: 309

Released	2015-07-29
Method	X-RAY DIFFRACTION 1.54 Å
Organisms	Streptococcus pyogenes str. Manfredo
Macromolecule	SIR2 FAMILY PROTEIN (protein)
Unique Ligands	EDO, GLY, ZN

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5A3B \| pdb_00005a3b	Download File View File

Crystal structure of the ADP-ribosylating sirtuin (SirTM) from Streptococcus pyogenes in complex with ADP-ribose

Rack, J.G.M., Morra, R., Barkauskaite, E., Kraehenbuehl, R., Ariza, A., Qu, Y., Ortmayer, M., Leidecker, O., Cameron, D.R., Matic, I., Peleg, A.Y., Leys, D., Traven, A., Ahel, I.

(2015) Mol Cell 59: 309

Released	2015-07-29
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Streptococcus pyogenes str. Manfredo
Macromolecule	SIR2 FAMILY PROTEIN (protein)
Unique Ligands	ALA, APR, EDO, GLY, ZN

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5A3C \| pdb_00005a3c	Download File View File

Crystal structure of the ADP-ribosylating sirtuin (SirTM) from Streptococcus pyogenes in complex with NAD

Rack, J.G.M., Morra, R., Barkauskaite, E., Kraehenbuehl, R., Ariza, A., Qu, Y., Ortmayer, M., Leidecker, O., Cameron, D.R., Matic, I., Peleg, A.Y., Leys, D., Traven, A., Ahel, I.

(2015) Mol Cell 59: 309

Released	2015-07-29
Method	X-RAY DIFFRACTION 2.03 Å
Organisms	Streptococcus pyogenes str. Manfredo
Macromolecule	SIR2 FAMILY PROTEIN (protein)
Unique Ligands	EDO, GLY, NAD, ZN

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8K66 \| pdb_00008k66	Download File View File

Cryo-EM structure of Oryza sativa HKT2;1 at 2.5 angstrom

Wang, X., Shen, X., Qu, Y., Wang, C., Shen, H.

(2024) Nat Plants 10: 633-644

Released	2024-04-03
Method	ELECTRON MICROSCOPY 2.53 Å
Organisms	Oryza sativa Japonica Group
Macromolecule	Cation transporter HKT2;1 (protein)
Unique Ligands	CLR, NA, PC1, PTY, T7X, Y01

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8K69 \| pdb_00008k69	Download File View File

Cryo-EM structure of Oryza sativa HKT2;2/1 at 2.3 angstrom

Wang, X., Shen, X., Qu, Y., Wang, C., Shen, H.

(2024) Nat Plants 10: 633-644

Released	2024-04-03
Method	ELECTRON MICROSCOPY 2.33 Å
Organisms	Oryza sativa Indica Group
Macromolecule	Cation transporter HKT2;2 (protein)
Unique Ligands	CLR, NA, PC1, PTY, T7X, Y01

1 to 8 of 8 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1QK6 | pdb_00001qk6

Solution structure of huwentoxin-I by NMR

1RWE | pdb_00001rwe

Enhancing the activity of insulin at receptor edge: crystal structure and photo-cross-linking of A8 analogues

5A35 | pdb_00005a35

Crystal structure of Glycine Cleavage Protein H-Like (GcvH-L) from Streptococcus pyogenes

5A3A | pdb_00005a3a

Crystal structure of the ADP-ribosylating sirtuin (SirTM) from Streptococcus pyogenes (Apo form)

5A3B | pdb_00005a3b

Crystal structure of the ADP-ribosylating sirtuin (SirTM) from Streptococcus pyogenes in complex with ADP-ribose

5A3C | pdb_00005a3c

Crystal structure of the ADP-ribosylating sirtuin (SirTM) from Streptococcus pyogenes in complex with NAD

8K66 | pdb_00008k66

Cryo-EM structure of Oryza sativa HKT2;1 at 2.5 angstrom

8K69 | pdb_00008k69

Cryo-EM structure of Oryza sativa HKT2;2/1 at 2.3 angstrom

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1QK6 | pdb_00001qk6

1RWE | pdb_00001rwe

5A35 | pdb_00005a35

5A3A | pdb_00005a3a

5A3B | pdb_00005a3b

5A3C | pdb_00005a3c

8K66 | pdb_00008k66

8K69 | pdb_00008k69