RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

234,785 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Structure Author = "Min, J."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 115 Structures.

Refinements

Structure Determination Methodology

experimental (115)

Scientific Name of Source Organism

	Homo sapiens (26)
	unidentified (7)
	Thermoanaerobacterium saccharolyticum JW/SL-YS485 (6)
	Streptomyces sp. CNH189 (5)
	Bambusicola thoracicus (4)
	Influenza A virus (A/Hong Kong/1/1968(H3N2)) (4)
	Streptomyces sp. (4)
	Thermobifida fusca (4)
	unclassified Marinobacter (4)
	Lavandula lanata (3)

More...

Taxonomy

	Eukaryota (52)
	Bacteria (48)
	Riboviria (11)
	unclassified sequences (7)
	other sequences (3)
	Archaea (2)

Experimental Method

	X-RAY DIFFRACTION (104)
	ELECTRON MICROSCOPY (7)
	SOLUTION NMR (4)

Polymer Entity Type

Protein (115)

Refinement Resolution (Å)

	1.0 - 1.5 (14)
	1.5 - 2.0 (39)
	2.0 - 2.5 (40)
	2.5 - 3.0 (12)
	3.0 - 3.5 (3)
	3.5 - 4.0 (1)
	4.0 - 4.5 (1)
	> 4.5 (1)

Release Date

	1995 - 1999 (1)
	2000 - 2004 (4)
	2005 - 2009 (3)
	2010 - 2014 (15)
	2015 - 2019 (28)
	2020 - 2024 (61)
	2025 - 2029 (3)

Enzyme Classification Name

	Hydrolases (30)
	Transferases (21)
	Lyases (5)
	Oxidoreductases (2)
	Ligases (1)

Membrane Protein Annotation

	OPM (1)
	PDBTM (1)
	mpstruc (1)

Symmetry Type

	Asymmetric (73)
	Cyclic (37)
	Dihedral (7)

SCOP Classification

	Alpha and beta proteins (a/b) (21)
	All beta proteins (6)
	Artifacts (7)
	Coiled coil proteins (2)
	All alpha proteins (2)
	Multi-domain proteins (alpha and beta) (2)
	Alpha and beta proteins (a+b) (4)

AllSelected

1 to 25 of 115 Structures

Page 1 of 5

Sort by

Explore in 3D

1BO9 \| pdb_00001bo9	Download File View File

NMR SOLUTION STRUCTURE OF DOMAIN 1 OF HUMAN ANNEXIN I

Gao, J., Yan Li, H.

(1999) J Biological Chem 274: 2971-2977

Released	1998-08-19
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	PROTEIN (ANNEXIN I) (protein)

Explore in 3D

1DV7 \| pdb_00001dv7	Download File View File

CRYSTAL STRUCTURE OF OROTIDINE MONOPHOSPHATE DECARBOXYLASE

Wu, N., Mo, Y., Gao, J., Pai, E.F.

(2000) Proc Natl Acad Sci U S A 97: 2017-2022

Released	2000-04-05
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	OROTIDINE 5'-PHOSPHATE DECARBOXYLASE (protein)

Explore in 3D

1DVJ \| pdb_00001dvj	Download File View File

CRYSTAL STRUCTURE OF OROTIDINE MONOPHOSPHATE DECARBOXYLASE COMPLEXED WITH 6-AZAUMP

Wu, N., Mo, Y., Gao, J., Pai, E.F.

(2000) Proc Natl Acad Sci U S A 97: 2017-2022

Released	2000-04-05
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	OROTIDINE 5'-PHOSPHATE DECARBOXYLASE (protein)
Unique Ligands	UP6

Explore in 3D

1OS5 \| pdb_00001os5	Download File View File

Crystal structure of HCV NS5B RNA polymerase complexed with a novel non-competitive inhibitor.

Love, R.A., Parge, H.E., Yu, X., Hickey, M.J., Diehl, W., Gao, J., Wriggers, H., Ekker, A., Wang, L., Thomson, J.A., Dragovich, P.S., Fuhrman, S.A.

(2003) J Virol 77: 7575-7581

Released	2004-03-18
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Hepatitis C virus subtype 1b
Macromolecule	Hepatitis C virus NS5B RNA polymerase (protein)
Unique Ligands	NH1

Explore in 3D

1Q5X \| pdb_00001q5x	Download File View File

Structure of OF RRAA (MENG), a protein inhibitor of RNA processing

Monzingo, A.F., Gao, J., Qiu, J., Georgiou, G., Robertus, J.D.

(2003) J Mol Biology 332: 1015-1024

Released	2003-09-30
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli
Macromolecule	REGULATOR OF RNASE E ACTIVITY A (protein)

Explore in 3D

1Z9M \| pdb_00001z9m	Download File View File

Crystal Structure of Nectin-like molecule-1 protein Domain 1

Dong, X., Xu, F., Gong, Y., Gao, J., Lin, P., Chen, T., Peng, Y., Qiang, B., Yuan, J., Peng, X., Rao, Z.

(2006) J Biological Chem 281: 10610-10617

Released	2006-02-07
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	GAPA225 (protein)

Explore in 3D

2IS9 \| pdb_00002is9	Download File View File

Structure of yeast DCN-1

Yang, X., Zhou, J., Sun, L., Wei, Z., Gao, J., Gong, W., Xu, R.M., Rao, Z., Liu, Y.

(2007) J Biological Chem 282: 24490-24494

Released	2007-06-26
Method	X-RAY DIFFRACTION 1.92 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Defective in cullin neddylation protein 1 (protein)
Unique Ligands	CL, MES, PT

Explore in 3D

3FCJ \| pdb_00003fcj	Download File View File

Nitroalkane oxidase: mutant402N crystallized with nitroethane

Major, D.T., Gao, J., Heroux, A., Orville, A.M., Valley, M.P., Fitzpatrick, P.F.

(2009) Proc Natl Acad Sci U S A 106: 20734-20739

Released	2009-11-03
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Fusarium oxysporum
Macromolecule	Nitroalkane oxidase (protein)
Unique Ligands	FAD, GOL, NIE

Explore in 3D

3MFQ \| pdb_00003mfq	Download File View File

A Glance into the Metal Binding Specificity of TroA: Where Elaborate Behaviors Occur in the Active Center

Gao, G.F., Zheng, B., Zhang, Q., Gao, J., Han, H., Li, M.

(2011) PLoS One 6: e19510-e19510

Released	2011-04-13
Method	X-RAY DIFFRACTION 2.598 Å
Organisms	Streptococcus suis 05ZYH33
Macromolecule	High-affinity zinc uptake system protein znuA (protein)
Unique Ligands	ZN

Explore in 3D

3W24 \| pdb_00003w24	Download File View File

The high-resolution crystal structure of TsXylA, intracellular xylanase from Thermoanaerobacterium saccharolyticum JW/SL-YS485

Han, X., Gao, J., Shang, N., Huang, C.-H., Ko, T.-P., Zhu, Z., Wiegel, J., Shao, W., Guo, R.-T.

(2013) Proteins 81: 1256-1265

Released	2013-04-03
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Thermoanaerobacterium saccharolyticum JW/SL-YS485
Macromolecule	Glycoside hydrolase family 10 (protein)

Explore in 3D

3W25 \| pdb_00003w25	Download File View File

The high-resolution crystal structure of TsXylA, intracellular xylanase from /Thermoanaerobacterium saccharolyticum JW/SL-YS485/: the complex of the E146A mutant with xylobiose

Han, X., Gao, J., Shang, N., Huang, C.-H., Ko, T.-P., Zhu, Z., Wiegel, J., Shao, W., Guo, R.-T.

(2013) Proteins 81: 1256-1265

Released	2013-04-03
Method	X-RAY DIFFRACTION 1.32 Å
Organisms	Thermoanaerobacterium saccharolyticum JW/SL-YS485
Macromolecule	Glycoside hydrolase family 10 (protein)
Unique branched monosaccharides	XYP

Explore in 3D

3W26 \| pdb_00003w26	Download File View File

The high-resolution crystal structure of TsXylA, intracellular xylanase from /Thermoanaerobacterium saccharolyticum JW/SL-YS485/: the complex of the E146A mutant with xylotriose

Han, X., Gao, J., Shang, N., Huang, C.-H., Ko, T.-P., Zhu, Z., Wiegel, J., Shao, W., Guo, R.-T.

(2013) Proteins 81: 1256-1265

Released	2013-04-03
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Thermoanaerobacterium saccharolyticum JW/SL-YS485
Macromolecule	Glycoside hydrolase family 10 (protein)
Unique branched monosaccharides	XYP

Explore in 3D

3W27 \| pdb_00003w27	Download File View File

The high-resolution crystal structure of TsXylA, intracellular xylanase from /Thermoanaerobacterium saccharolyticum JW/SL-YS485/: the complex of the E251A mutant with xylobiose

Han, X., Gao, J., Shang, N., Huang, C.-H., Ko, T.-P., Zhu, Z., Wiegel, J., Shao, W., Guo, R.-T.

(2013) Proteins 81: 1256-1265

Released	2013-04-03
Method	X-RAY DIFFRACTION 1.41 Å
Organisms	Thermoanaerobacterium saccharolyticum JW/SL-YS485
Macromolecule	Glycoside hydrolase family 10 (protein)
Unique branched monosaccharides	XYP, XYS

Explore in 3D

3W28 \| pdb_00003w28	Download File View File

The high-resolution crystal structure of TsXylA, intracellular xylanase from /Thermoanaerobacterium saccharolyticum JW/SL-YS485/: the complex of the E251A mutant with xylotriose

Han, X., Gao, J., Shang, N., Huang, C.-H., Ko, T.-P., Zhu, Z., Wiegel, J., Shao, W., Guo, R.-T.

(2013) Proteins 81: 1256-1265

Released	2013-04-03
Method	X-RAY DIFFRACTION 1.39 Å
Organisms	Thermoanaerobacterium saccharolyticum JW/SL-YS485
Macromolecule	Glycoside hydrolase family 10 (protein)
Unique branched monosaccharides	XYP, XYS

Explore in 3D

3W29 \| pdb_00003w29	Download File View File

The high-resolution crystal structure of TsXylA, intracellular xylanase from /Thermoanaerobacterium saccharolyticum JW/SL-YS485/: the complex of the E251A mutant with xylotetraose

Han, X., Gao, J., Shang, N., Huang, C.-H., Ko, T.-P., Zhu, Z., Wiegel, J., Shao, W., Guo, R.-T.

(2013) Proteins 81: 1256-1265

Released	2013-04-03
Method	X-RAY DIFFRACTION 1.39 Å
Organisms	Thermoanaerobacterium saccharolyticum JW/SL-YS485
Macromolecule	Glycoside hydrolase family 10 (protein)
Unique branched monosaccharides	XYP, XYS

Explore in 3D

3WUB \| pdb_00003wub	Download File View File

The wild type crystal structure of b-1,4-Xylanase (XynAS9) from Streptomyces sp. 9

Chen, C.C., Han, X., Lv, P., Ko, T.P., Peng, W., Huang, C.H., Zheng, Y., Gao, J., Yang, Y.Y., Guo, R.T.

(2014) J Biotechnol 189C: 175-182

Released	2014-10-29
Method	X-RAY DIFFRACTION 2.08 Å
Organisms	Streptomyces sp.
Macromolecule	Endo-1,4-beta-xylanase A (protein)
Unique Ligands	ZN

Explore in 3D

3WUE \| pdb_00003wue	Download File View File

The wild type crystal structure of b-1,4-Xylanase (XynAS9) with xylobiose from Streptomyces sp. 9

Chen, C.C., Han, X., Lv, P., Ko, T.P., Peng, W., Huang, C.H., Zheng, Y., Gao, J., Yang, Y., Guo, R.T.

(2014) J Biotechnol 189C: 175-182

Released	2014-10-29
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Streptomyces sp.
Macromolecule	Endo-1,4-beta-xylanase A (protein)
Unique Ligands	ZN
Unique branched monosaccharides	XYP

Explore in 3D

3WUF \| pdb_00003wuf	Download File View File

The mutant crystal structure of b-1,4-Xylanase (XynAS9_V43P/G44E) from Streptomyces sp. 9

Chen, C.C., Han, X., Lv, P., Ko, T.P., Peng, W., Huang, C.H., Zheng, Y., Gao, J., Yang, Y.Y., Guo, R.T.

(2014) J Biotechnol 189C: 175-182

Released	2014-10-29
Method	X-RAY DIFFRACTION 2.04 Å
Organisms	Streptomyces sp.
Macromolecule	Endo-1,4-beta-xylanase A (protein)
Unique Ligands	ZN

Explore in 3D

3WUG \| pdb_00003wug	Download File View File

The mutant crystal structure of b-1,4-Xylanase (XynAS9_V43P/G44E) with xylobiose from Streptomyces sp. 9

Chen, C.C., Han, X., Lv, P., Ko, T.P., Peng, W., Huang, C.H., Zheng, Y., Gao, J., Yang, Y.Y., Guo, R.T.

(2014) J Biotechnol 189C: 175-182

Released	2014-10-29
Method	X-RAY DIFFRACTION 1.88 Å
Organisms	Streptomyces sp.
Macromolecule	Endo-1,4-beta-xylanase A (protein)
Unique Ligands	ZN
Unique branched monosaccharides	XYP

Explore in 3D

3WYI \| pdb_00003wyi	Download File View File

Structure of S. aureus undecaprenyl diphosphate synthase

Gao, J., Ko, T.P., Huang, C.H., Oldfield, E., Guo, R.T.

(2015) J Med Chem 58: 1215-1227

Released	2015-02-04
Method	X-RAY DIFFRACTION 2 Å
Organisms	Staphylococcus aureus
Macromolecule	Isoprenyl transferase (protein)
Unique Ligands	MG

Explore in 3D

3WYJ \| pdb_00003wyj	Download File View File

Structure of E. coli undecaprenyl diphosphate synthase in complex with BPH-789

Gao, J., Ko, T.P., Huang, C.H., Oldfield, E., Guo, R.T.

(2015) J Med Chem 58: 1215-1227

Released	2015-02-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Escherichia coli K-12
Macromolecule	Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) (protein)
Unique Ligands	H78

Explore in 3D

4IKG \| pdb_00004ikg	Download File View File

Crystal structure of cell death-inducing DFFA-like effector c

Yang, M., Gao, J.

(2013) Nat Commun 4: 1594-1594

Released	2014-06-04
Method	X-RAY DIFFRACTION 1.9318 Å
Organisms	Mus musculus
Macromolecule	Cell death activator CIDE-3 (protein)
Unique Ligands	IOD

Explore in 3D

4KS7 \| pdb_00004ks7	Download File View File

PAK6 kinase domain in complex with PF-3758309

Gao, J., Boggon, T.J.

(2013) PLoS One 8: e77818-e77818

Released	2013-09-11
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Homo sapiens
Macromolecule	Serine/threonine-protein kinase PAK 6 (protein)
Unique Ligands	7KC, IPA

Explore in 3D

4KS8 \| pdb_00004ks8	Download File View File

PAK6 kinase domain in complex with sunitinib

Gao, J., Boggon, T.J.

(2013) PLoS One 8: e77818-e77818

Released	2013-09-11
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Homo sapiens
Macromolecule	Serine/threonine-protein kinase PAK 6 (protein)
Unique Ligands	B49

Explore in 3D

4MOD \| pdb_00004mod	Download File View File

Structure of the MERS-CoV fusion core

Gao, J., Lu, G., Qi, J., Li, Y., Wu, Y., Deng, Y., Geng, H., Xiao, H., Tan, W., Yan, J., Gao, G.F.

(2013) J Virol 87: 13134-13140

Released	2013-10-09
Method	X-RAY DIFFRACTION 1.901 Å
Organisms	Human betacoronavirus 2c EMC/2012 synthetic construct
Macromolecule	HR1 of S protein, LINKER, HR2 of S protein (protein)

1 to 25 of 115 Structures

Page 1 of 5

Sort by

About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy

Support
Contact Us
Help
Website FAQ
Glossary
Service Status

RCSB PDB is hosted by

RCSB PDB is a member of the

RCSB Partners
Nucleic Acid Knowledgebase

wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1BO9 | pdb_00001bo9

1DV7 | pdb_00001dv7

1DVJ | pdb_00001dvj

1OS5 | pdb_00001os5

1Q5X | pdb_00001q5x

1Z9M | pdb_00001z9m

2IS9 | pdb_00002is9

3FCJ | pdb_00003fcj

3MFQ | pdb_00003mfq

3W24 | pdb_00003w24

3W25 | pdb_00003w25

3W26 | pdb_00003w26

3W27 | pdb_00003w27

3W28 | pdb_00003w28

3W29 | pdb_00003w29

3WUB | pdb_00003wub

3WUE | pdb_00003wue

3WUF | pdb_00003wuf

3WUG | pdb_00003wug

3WYI | pdb_00003wyi

3WYJ | pdb_00003wyj

4IKG | pdb_00004ikg

4KS7 | pdb_00004ks7

4KS8 | pdb_00004ks8

4MOD | pdb_00004mod