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235,183 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Kuhn, R.J."

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Search Summary

This query matches 154 Structures.

Refinements

Structure Determination Methodology

experimental (154)

Scientific Name of Source Organism

	Oryctolagus cuniculus (34)
	Homo sapiens (21)
	Sus scrofa (12)
	Haloarcula marismortui (10)
	Saccharomyces cerevisiae S288C (10)
	Thermus thermophilus (10)
	Saccharomyces cerevisiae (9)
	Aquifex aeolicus VF5 (6)
	Halalkalibacterium halodurans (6)
	Thermus aquaticus (5)

More...

Taxonomy

	Eukaryota (94)
	Bacteria (54)
	Archaea (11)
	unclassified sequences (2)
	Eukaryota (eukaryotes) (1)

Experimental Method

	X-RAY DIFFRACTION (113)
	ELECTRON MICROSCOPY (41)

Polymer Entity Type

	Protein (150)
	RNA (21)
	NA-hybrid (1)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	1.5 - 2.0 (7)
	2.0 - 2.5 (17)
	2.5 - 3.0 (42)
	3.0 - 3.5 (48)
	3.5 - 4.0 (11)
	4.0 - 4.5 (6)
	> 4.5 (21)

Release Date

	1990 - 1994 (1)
	1995 - 1999 (4)
	2000 - 2004 (21)
	2005 - 2009 (25)
	2010 - 2014 (39)
	2015 - 2019 (21)
	2020 - 2024 (43)

Enzyme Classification Name

	Translocases (78)
	Hydrolases (63)
	Transferases (5)

Membrane Protein Annotation

	PDBTM (98)
	MemProtMD (78)
	mpstruc (65)
	OPM (49)

Symmetry Type

	Asymmetric (141)
	Cyclic (16)

SCOP Classification

	All beta proteins (46)
	Alpha and beta proteins (a+b) (30)
	Alpha and beta proteins (a/b) (45)
	Membrane and cell surface proteins and peptides (23)
	Small proteins (7)
	All alpha proteins (9)
	Low resolution protein structures (5)
	Peptides (6)
	Artifacts (1)

AllSelected

1 to 25 of 154 Structures

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1B23 \| pdb_00001b23	Download File View File

E. coli cysteinyl-tRNA and T. aquaticus elongation factor EF-TU:GTP ternary complex

Nissen, P., Kjeldgaard, M., Thirup, S., Nyborg, J.

(1999) Structure 7: 143-156

Released	1998-12-07
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Escherichia coli Thermus aquaticus
Macromolecule	ELONGATION FACTOR TU (protein) CYSTEINYL TRNA (nucleic acid)
Unique Ligands	CYS, GNP, MG, SO4

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1C04 \| pdb_00001c04	Download File View File

IDENTIFICATION OF KNOWN PROTEIN AND RNA STRUCTURES IN A 5 A MAP OF THE LARGE RIBOSOMAL SUBUNIT FROM HALOARCULA MARISMORTUI

Ban, N., Nissen, P., Capel, M., Moore, P.B., Steitz, T.A.

(1999) Nature 400: 841-847

Released	1999-08-31
Method	X-RAY DIFFRACTION 5 Å
Organisms	Haloarcula marismortui
Macromolecule	Unique protein chains: 4 Unique nucleic acid chains: 2

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1EFT \| pdb_00001eft	Download File View File

THE CRYSTAL STRUCTURE OF ELONGATION FACTOR EF-TU FROM THERMUS AQUATICUS IN THE GTP CONFORMATION

Kjeldgaard, M., Nissen, P., Thirup, S., Nyborg, J.

(1993) Structure 1: 35-50

Released	1994-08-31
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Thermus aquaticus
Macromolecule	ELONGATION FACTOR TU (protein)
Unique Ligands	GNP, MG

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1FFK \| pdb_00001ffk	Download File View File

CRYSTAL STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT FROM HALOARCULA MARISMORTUI AT 2.4 ANGSTROM RESOLUTION

Ban, N., Nissen, P., Hansen, J., Moore, P.B., Steitz, T.A.

(2000) Science 289: 905-920

Released	2000-08-14
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Haloarcula marismortui
Macromolecule	Unique protein chains: 27 Unique nucleic acid chains: 2
Unique Ligands	CD, K, MG

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1FFZ \| pdb_00001ffz	Download File View File

LARGE RIBOSOMAL SUBUNIT COMPLEXED WITH R(CC)-DA-PUROMYCIN

Nissen, P., Hansen, J., Ban, N., Moore, P.B., Steitz, T.A.

(2000) Science 289: 920-930

Released	2000-08-28
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Haloarcula marismortui
Macromolecule	23S RIBOSOMAL RNA (nucleic acid) R(PCPC)-D(PA)-R(P*(PU)) (hybrid)

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1FG0 \| pdb_00001fg0	Download File View File

LARGE RIBOSOMAL SUBUNIT COMPLEXED WITH A 13 BP MINIHELIX-PUROMYCIN COMPOUND

Nissen, P., Hansen, J., Ban, N., Moore, P.B., Steitz, T.A.

(2000) Science 289: 920-930

Released	2000-08-28
Method	X-RAY DIFFRACTION 3 Å
Organisms	Haloarcula marismortui
Macromolecule	23S RIBOSOMAL RNA (nucleic acid) 5'-R(CCGGCGGGCUGGUUCAAACCGGCCCGCCGGACC)-3'-5'-R(P-PUROMYCIN)-3' (nucleic acid)

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1K73 \| pdb_00001k73	Download File View File

Co-crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit

Hansen, J., Ban, N., Nissen, P., Moore, P.B., Steitz, T.A.

(2003) J Mol Biology 330: 1061-1075

Released	2003-07-22
Method	X-RAY DIFFRACTION 3.01 Å
Organisms	Haloarcula marismortui
Macromolecule	Unique protein chains: 28 Unique nucleic acid chains: 2
Unique Ligands	ANM, CD, CL, K, MG, NA

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1K8A \| pdb_00001k8a	Download File View File

Co-crystal structure of Carbomycin A bound to the 50S ribosomal subunit of Haloarcula marismortui

Hansen, J.L., Ippolito, J.A., Ban, N., Nissen, P., Moore, P.B., Steitz, T.

(2002) Mol Cell 10: 117-128

Released	2002-07-19
Method	X-RAY DIFFRACTION 3 Å
Organisms	Haloarcula marismortui
Macromolecule	Unique protein chains: 28 Unique nucleic acid chains: 2
Unique Ligands	CAI, CD, CL, K, MG, NA

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1K9M \| pdb_00001k9m	Download File View File

Co-crystal structure of tylosin bound to the 50S ribosomal subunit of Haloarcula marismortui

Hansen, J.L., Ippolito, J.A., Ban, N., Nissen, P., Moore, P.B., Steitz, T.A.

(2002) Mol Cell 10: 117-128

Released	2002-07-19
Method	X-RAY DIFFRACTION 3 Å
Organisms	Haloarcula marismortui
Macromolecule	Unique protein chains: 28 Unique nucleic acid chains: 2
Unique Ligands	CD, CL, K, MG, NA, TYK

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1KC8 \| pdb_00001kc8	Download File View File

Co-crystal Structure of Blasticidin S Bound to the 50S Ribosomal Subunit

Hansen, J.L., Ban, N., Nissen, P., Moore, P.B., Steitz, T.A.

(2003) J Mol Biology 330: 1061-1075

Released	2003-07-22
Method	X-RAY DIFFRACTION 3.01 Å
Organisms	Haloarcula marismortui
Macromolecule	Unique protein chains: 28 Unique nucleic acid chains: 2
Unique Ligands	BLS, CD, CL, K, MG, NA

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1KD1 \| pdb_00001kd1	Download File View File

Co-crystal Structure of Spiramycin bound to the 50S Ribosomal Subunit of Haloarcula marismortui

Hansen, J.L., Ippolito, J.A., Ban, N., Nissen, P., Moore, P.B., Steitz, T.A.

(2002) Mol Cell 10: 117-128

Released	2002-07-19
Method	X-RAY DIFFRACTION 3 Å
Organisms	Haloarcula marismortui
Macromolecule	Unique protein chains: 28 Unique nucleic acid chains: 2
Unique Ligands	CD, CL, K, MG, NA, SPR

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1M1K \| pdb_00001m1k	Download File View File

Co-crystal structure of azithromycin bound to the 50S ribosomal subunit of Haloarcula marismortui

Hansen, J.L., Ippolito, J.A., Ban, N., Nissen, P., Moore, P.B., Steitz, T.A.

(2002) Mol Cell 10: 117-128

Released	2002-07-19
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Haloarcula marismortui
Macromolecule	Unique protein chains: 28 Unique nucleic acid chains: 2
Unique Ligands	CD, CL, K, MG, NA, ZIT

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1N0U \| pdb_00001n0u	Download File View File

Crystal structure of yeast elongation factor 2 in complex with sordarin

Joergensen, R., Ortiz, P.A., Carr-Schmid, A., Nissen, P., Kinzy, T.G., Andersen, G.R.

(2003) Nat Struct Biol 10: 379-385

Released	2003-02-11
Method	X-RAY DIFFRACTION 2.12 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Elongation factor 2 (protein)
Unique Ligands	SO1

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1N0V \| pdb_00001n0v	Download File View File

Crystal structure of elongation factor 2

Joergensen, R., Ortiz, P.A., Carr-Schmid, A., Nissen, P., Kinzy, T.G., Andersen, G.R.

(2003) Nat Struct Biol 10: 379-385

Released	2002-11-27
Method	X-RAY DIFFRACTION 2.85 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Elongation factor 2 (protein)

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1OB2 \| pdb_00001ob2	Download File View File

E. coli elongation factor EF-Tu complexed with the antibiotic kirromycin, a GTP analog, and Phe-tRNA

Kristensen, O., Nissen, P., Nyborg, J.

To be published

Released	2004-05-27
Method	X-RAY DIFFRACTION 3.35 Å
Organisms	Escherichia coli BL21 Saccharomyces cerevisiae
Macromolecule	ELONGATION FACTOR TU (protein) TRANSFER-RNA, PHE (nucleic acid)
Unique Ligands	GNP, KIR, MG
Unique branched monosaccharides	FRU, GLC

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1OB5 \| pdb_00001ob5	Download File View File

T. aquaticus elongation factor EF-Tu complexed with the antibiotic enacyloxin IIa, a GTP analog, and Phe-tRNA

Dahlberg, C., Nielsen, R.C., Parmeggiani, A., Nyborg, J., Nissen, P.

(2006) J Biological Chem 281: 2893

Released	2005-10-13
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Saccharomyces cerevisiae Thermus aquaticus
Macromolecule	ELONGATION FACTOR TU (protein) TRANSFER-RNA, PHE (nucleic acid)
Unique Ligands	ENX, GNP, MG

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1QZA \| pdb_00001qza	Download File View File

Coordinates of the A/T site tRNA model fitted into the cryo-EM map of EF-Tu ternary complex (GDP.Kirromycin) bound 70S ribosome

Valle, M., Zavialov, A., Li, W., Stagg, S.M., Sengupta, J., Nielsen, R.C., Nissen, P., Harvey, S.C., Ehrenberg, M., Frank, J.

(2003) Nat Struct Biol 10: 899-906

Released	2003-11-04
Method	ELECTRON MICROSCOPY 10 Å
Macromolecule	Phe-tRNA (nucleic acid)

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1QZB \| pdb_00001qzb	Download File View File

Coordinates of the A-site tRNA model fitted into the cryo-EM map of 70S ribosome in the pre-translocational state

Valle, M., Zavialov, A., Li, W., Stagg, S.M., Sengupta, J., Nielsen, R.C., Nissen, P., Harvey, S.C., Ehrenberg, M., Frank, J.

(2003) Nat Struct Biol 10: 899-906

Released	2003-11-04
Method	ELECTRON MICROSCOPY 9 Å
Macromolecule	Phe-tRNA (nucleic acid)

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1QZC \| pdb_00001qzc	Download File View File

Coordinates of S12, SH44, LH69 and SRL separately fitted into the cryo-EM map of EF-Tu ternary complex (GDP.Kirromycin) bound 70S ribosome

Valle, M., Zavialov, A., Li, W., Stagg, S.M., Sengupta, J., Nielsen, R.C., Nissen, P., Harvey, S.C., Ehrenberg, M., Frank, J.

(2003) Nat Struct Biol 10: 899-906

Released	2003-11-04
Method	ELECTRON MICROSCOPY 9 Å
Organisms	Escherichia coli Thermus thermophilus
Macromolecule	30S ribosomal protein S12 (protein) 16S rRNA (nucleic acid) 23S rRNA (nucleic acid)

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1QZD \| pdb_00001qzd	Download File View File

EF-Tu.kirromycin coordinates fitted into the cryo-EM map of EF-Tu ternary complex (GDP.Kirromycin) bound 70S ribosome

Valle, M., Zavialov, A., Li, W., Stagg, S.M., Sengupta, J., Nielsen, R.C., Nissen, P., Harvey, S.C., Ehrenberg, M., Frank, J.

(2003) Nat Struct Biol 10: 899-906

Released	2003-11-04
Method	ELECTRON MICROSCOPY 10 Å
Organisms	Escherichia coli
Macromolecule	Elongation factor Tu (protein)

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1R2W \| pdb_00001r2w	Download File View File

Coordinates of L11 with 58nts of 23S rRNA fitted into the cryo-EM map of the 70S ribosome

Valle, M., Zavialov, A., Li, W., Stagg, S.M., Sengupta, J., Nielsen, R.C., Nissen, P., Harvey, S.C., Ehrenberg, M., Frank, J.

(2003) Nat Struct Biol 10: 899-906

Released	2003-11-04
Method	ELECTRON MICROSCOPY 9 Å
Organisms	Thermotoga maritima
Macromolecule	50S ribosomal protein L11 (protein) 58nts of 23S rRNA (nucleic acid)

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1R2X \| pdb_00001r2x	Download File View File

Coordinates of L11 with 58nts of 23S rRNA fitted into the cryo-EM map of EF-Tu ternary complex (GDP.Kirromycin) bound 70S ribosome

Valle, M., Zavialov, A., Li, W., Stagg, S.M., Sengupta, J., Nielsen, R.C., Nissen, P., Harvey, S.C., Ehrenberg, M., Frank, J.

(2003) Nat Struct Biol 10: 899-906

Released	2003-11-04
Method	ELECTRON MICROSCOPY 9 Å
Organisms	Thermotoga maritima
Macromolecule	50S ribosomal protein L11 (protein) 58nts of 23S rRNA (nucleic acid)

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1T5S \| pdb_00001t5s	Download File View File

Structure of the (SR)Ca2+-ATPase Ca2-E1-AMPPCP form

Sorensen, T.L.-M., Moller, J.V., Nissen, P.

(2004) Science 304: 1672-1675

Released	2004-06-15
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Oryctolagus cuniculus
Macromolecule	Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 isoform SERCA1a (protein)
Unique Ligands	ACP, CA, K, MG

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1T5T \| pdb_00001t5t	Download File View File

Structure of the (SR)Ca2+-ATPase Ca2-E1-ADP:AlF4- form

Sorensen, T.L.-M., Moller, J.V., Nissen, P.

(2004) Science 304: 1672-1675

Released	2004-06-15
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Oryctolagus cuniculus
Macromolecule	Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 isoform SERCA1A (protein)
Unique Ligands	ADP, ALF, CA, K, MG

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1TRJ \| pdb_00001trj	Download File View File

Homology Model of Yeast RACK1 Protein fitted into 11.7A cryo-EM map of Yeast 80S Ribosome

Sengupta, J., Nilsson, J., Gursky, R., Spahn, C.M., Nissen, P., Frank, J.

(2004) Nat Struct Mol Biol 11: 957-962

Released	2004-09-28
Method	ELECTRON MICROSCOPY 11.7 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Guanine nucleotide-binding protein beta subunit-like protein (protein) Helix 39 of 18S rRNA (nucleic acid) Helix 40 of 18S rRNA (nucleic acid)

1 to 25 of 154 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1B23 | pdb_00001b23

1C04 | pdb_00001c04

1EFT | pdb_00001eft

1FFK | pdb_00001ffk

1FFZ | pdb_00001ffz

1FG0 | pdb_00001fg0

1K73 | pdb_00001k73

1K8A | pdb_00001k8a

1K9M | pdb_00001k9m

1KC8 | pdb_00001kc8

1KD1 | pdb_00001kd1

1M1K | pdb_00001m1k

1N0U | pdb_00001n0u

1N0V | pdb_00001n0v

1OB2 | pdb_00001ob2

1OB5 | pdb_00001ob5

1QZA | pdb_00001qza

1QZB | pdb_00001qzb

1QZC | pdb_00001qzc

1QZD | pdb_00001qzd

1R2W | pdb_00001r2w

1R2X | pdb_00001r2x

1T5S | pdb_00001t5s

1T5T | pdb_00001t5t

1TRJ | pdb_00001trj