RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Structure Author = "Flanagan, J.M."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 16 Structures.

Refinements

Structure Determination Methodology

experimental (16)

Scientific Name of Source Organism

	Homo sapiens (10)
	Escherichia coli (5)
	Human adenovirus 12 (4)

Taxonomy

	Eukaryota (10)
	Bacteria (5)
	Varidnaviria (4)
	Eukaryota (eukaryotes) (1)

Experimental Method

	X-RAY DIFFRACTION (14)
	SOLUTION NMR (2)

Polymer Entity Type

Protein (16)

Refinement Resolution (Å)

	1.5 - 2.0 (5)
	2.0 - 2.5 (4)
	2.5 - 3.0 (4)
	3.0 - 3.5 (1)

Release Date

	1995 - 1999 (5)
	2000 - 2004 (2)
	2005 - 2009 (9)

Enzyme Classification Name

	Transferases (6)
	Hydrolases (3)

Symmetry Type

	Cyclic (8)
	Asymmetric (6)
	Dihedral (3)

SCOP Classification

	Alpha and beta proteins (a/b) (3)
	All beta proteins (4)
	Alpha and beta proteins (a+b) (6)
	Artifacts (3)
	All alpha proteins (2)
	Coiled coil proteins (1)

AllSelected

1 to 16 of 16 Structures

Page 1 of 1

Sort by

Explore in 3D

1BQ0 \| pdb_00001bq0	Download File View File

J-DOMAIN (RESIDUES 1-77) OF THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 1-104) OF THE MOLECULAR CHAPERONE DNAJ, NMR, 20 STRUCTURES

Huang, K., Flanagan, J.M., Prestegard, J.H.

(1999) Protein Sci 8: 203-214

Released	1999-06-15
Method	SOLUTION NMR
Organisms	Escherichia coli
Macromolecule	DNAJ (protein)

Explore in 3D

1BQZ \| pdb_00001bqz	Download File View File

J-DOMAIN (RESIDUES 1-77) OF THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 1-78) OF THE MOLECULAR CHAPERONE DNAJ, NMR, 20 STRUCTURES

Huang, K., Flanagan, J.M., Prestegard, J.H.

(1999) Protein Sci 8: 203-214

Released	1999-06-15
Method	SOLUTION NMR
Organisms	Escherichia coli
Macromolecule	DNAJ (protein)

Explore in 3D

1KAC \| pdb_00001kac	Download File View File

KNOB DOMAIN FROM ADENOVIRUS SEROTYPE 12 IN COMPLEX WITH DOMAIN 1 OF ITS CELLULAR RECEPTOR CAR

Bewley, M.C., Springer, K., Zhang, Y.B., Freimuth, P., Flanagan, J.M.

(1999) Science 286: 1579-1583

Released	1999-11-24
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens Human adenovirus 12
Macromolecule	PROTEIN (COXSACKIE VIRUS AND ADENOVIRUS RECEPTOR) (protein) PROTEIN (FIBER KNOB PROTEIN) (protein)

Explore in 3D

1NOB \| pdb_00001nob	Download File View File

KNOB DOMAIN FROM ADENOVIRUS SEROTYPE 12

Bewley, M.C., Springer, K., Zhang, Y.B., Freimuth, P., Flanagan, J.M.

(1999) Science 286: 1579-1583

Released	1999-11-24
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Human adenovirus 12
Macromolecule	PROTEIN (FIBER KNOB PROTEIN) (protein)

Explore in 3D

1P69 \| pdb_00001p69	Download File View File

STRUCTURAL BASIS FOR VARIATION IN ADENOVIRUS AFFINITY FOR THE CELLULAR RECEPTOR CAR (P417S MUTANT)

Howitt, J., Bewley, M.C., Graziano, V., Flanagan, J.M., Freimuth, P.

(2003) J Biological Chem 278: 26208-26215

Released	2004-05-11
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Homo sapiens Human adenovirus 12
Macromolecule	Coxsackievirus and adenovirus receptor (protein) Fiber protein (protein)

Explore in 3D

1P6A \| pdb_00001p6a	Download File View File

STRUCTURAL BASIS FOR VARIATION IN ADENOVIRUS AFFINITY FOR THE CELLULAR RECEPTOR CAR (S489Y MUTANT)

Howitt, J., Bewley, M.C., Graziano, V., Flanagan, J.M., Freimuth, P.

(2003) J Biological Chem 278: 26208-26215

Released	2004-05-11
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens Human adenovirus 12
Macromolecule	Coxsackievirus and adenovirus receptor (protein) Fiber protein (protein)

Explore in 3D

1TYF \| pdb_00001tyf	Download File View File

THE STRUCTURE OF CLPP AT 2.3 ANGSTROM RESOLUTION SUGGESTS A MODEL FOR ATP-DEPENDENT PROTEOLYSIS

Wang, J., Hartling, J.A., Flanagan, J.M.

(1997) Cell 91: 447-456

Released	1998-06-17
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli
Macromolecule	CLP PEPTIDASE (protein)

Explore in 3D

1YG6 \| pdb_00001yg6	Download File View File

ClpP

Bewley, M.C., Graziano, V., Griffin, K., Flanagan, J.M.

(2006) J Struct Biol 153: 113-128

Released	2006-04-04
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Escherichia coli
Macromolecule	ATP-dependent Clp protease proteolytic subunit (protein)
Unique Ligands	MPD

Explore in 3D

1YG8 \| pdb_00001yg8	Download File View File

The structure of a V6A variant of ClpP.

Bewley, M.C., Graziano, V., Griffin, K., Flanagan, J.M.

(2006) J Struct Biol 153: 113-128

Released	2006-04-04
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Escherichia coli
Macromolecule	ATP-dependent Clp protease proteolytic subunit (protein)

Explore in 3D

2B3U \| pdb_00002b3u	Download File View File

Human Spermine spermidine acetyltransferase K26R mutant

Bewley, M.C., Graziano, V., Jiang, J.S., Matz, E., Studier, F.W., Pegg, A.P., Coleman, C.S., Flanagan, J.M., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2006) Proc Natl Acad Sci U S A 103: 2063-2068

Released	2006-01-17
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Homo sapiens
Macromolecule	Diamine acetyltransferase 1 (protein)
Unique Ligands	SO4

Explore in 3D

2B3V \| pdb_00002b3v	Download File View File

Spermine spermidine acetyltransferase in complex with acetylcoa, K26R mutant

Bewley, M.C., Graziano, V., Jiang, J.S., Matz, E., Studier, F.W., Pegg, A.P., Coleman, C.S., Flanagan, J.M., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2006) Proc Natl Acad Sci U S A 103: 2063-2068

Released	2006-01-17
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Homo sapiens
Macromolecule	Diamine acetyltransferase 1 (protein)
Unique Ligands	ACO

Explore in 3D

2B4B \| pdb_00002b4b	Download File View File

SSAT+COA+BE-3-3-3, K26R mutant

Bewley, M.C., Graziano, V., Jiang, J.S., Matz, E., Studier, F.W., Pegg, A.P., Coleman, C.S., Flanagan, J.M., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2006) Proc Natl Acad Sci U S A 103: 2063-2068

Released	2006-01-17
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Diamine acetyltransferase 1 (protein)
Unique Ligands	B33, COA

Explore in 3D

2B4D \| pdb_00002b4d	Download File View File

SSAT+COA+SP- SP disordered

Bewley, M.C., Graziano, V., Jiang, J.S., Matz, E., Studier, F.W., Pegg, A.P., Coleman, C.S., Flanagan, J.M., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2006) Proc Natl Acad Sci U S A 103: 2063-2068

Released	2006-01-17
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Diamine acetyltransferase 1 (protein)
Unique Ligands	COA

Explore in 3D

2B58 \| pdb_00002b58	Download File View File

SSAT with coa_sp, spermine disordered, K26R mutant

Bewley, M.C., Graziano, V., Jiang, J.S., Matz, E., Studier, F.W., Pegg, A.P., Coleman, C.S., Flanagan, J.M., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2006) Proc Natl Acad Sci U S A 103: 2063-2068

Released	2006-01-24
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Homo sapiens
Macromolecule	Diamine acetyltransferase 1 (protein)
Unique Ligands	COA

Explore in 3D

2B5G \| pdb_00002b5g	Download File View File

Wild Type SSAT- 1.7A structure

Bewley, M.C., Graziano, V., Jiang, J.S., Matz, E., Studier, F.W., Pegg, A.P., Coleman, C.S., Flanagan, J.M., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2006) Proc Natl Acad Sci U S A 103: 2063-2068

Released	2006-01-17
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	Diamine acetyltransferase 1 (protein)
Unique Ligands	SO4

Explore in 3D

3G7C \| pdb_00003g7c	Download File View File

Structure of the Phosphorylation Mimetic of Occludin C-term Tail

Tash, B.R., Sundstrom, J.M., Murakami, T., Flanagan, J.M., Bewley, M.C., Antonetii, D.A.

(2009) J Proteome Res 8: 808-817

Released	2009-05-12
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Occludin (protein)

1 to 16 of 16 Structures

Page 1 of 1

Sort by

About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy

Support
Contact Us
Help
Website FAQ
Glossary
Service Status

RCSB PDB is hosted by

RCSB PDB is a member of the

RCSB Partners
Nucleic Acid Knowledgebase

wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1BQ0 | pdb_00001bq0

J-DOMAIN (RESIDUES 1-77) OF THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 1-104) OF THE MOLECULAR CHAPERONE DNAJ, NMR, 20 STRUCTURES

1BQZ | pdb_00001bqz

J-DOMAIN (RESIDUES 1-77) OF THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 1-78) OF THE MOLECULAR CHAPERONE DNAJ, NMR, 20 STRUCTURES

1KAC | pdb_00001kac

KNOB DOMAIN FROM ADENOVIRUS SEROTYPE 12 IN COMPLEX WITH DOMAIN 1 OF ITS CELLULAR RECEPTOR CAR

1NOB | pdb_00001nob

KNOB DOMAIN FROM ADENOVIRUS SEROTYPE 12

1P69 | pdb_00001p69

STRUCTURAL BASIS FOR VARIATION IN ADENOVIRUS AFFINITY FOR THE CELLULAR RECEPTOR CAR (P417S MUTANT)

1P6A | pdb_00001p6a

STRUCTURAL BASIS FOR VARIATION IN ADENOVIRUS AFFINITY FOR THE CELLULAR RECEPTOR CAR (S489Y MUTANT)

1TYF | pdb_00001tyf

THE STRUCTURE OF CLPP AT 2.3 ANGSTROM RESOLUTION SUGGESTS A MODEL FOR ATP-DEPENDENT PROTEOLYSIS

1YG6 | pdb_00001yg6

ClpP

1YG8 | pdb_00001yg8

The structure of a V6A variant of ClpP.

2B3U | pdb_00002b3u

Human Spermine spermidine acetyltransferase K26R mutant

2B3V | pdb_00002b3v

Spermine spermidine acetyltransferase in complex with acetylcoa, K26R mutant

2B4B | pdb_00002b4b

SSAT+COA+BE-3-3-3, K26R mutant

2B4D | pdb_00002b4d

SSAT+COA+SP- SP disordered

2B58 | pdb_00002b58

SSAT with coa_sp, spermine disordered, K26R mutant

2B5G | pdb_00002b5g

Wild Type SSAT- 1.7A structure

3G7C | pdb_00003g7c

Structure of the Phosphorylation Mimetic of Occludin C-term Tail

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1BQ0 | pdb_00001bq0

1BQZ | pdb_00001bqz

1KAC | pdb_00001kac

1NOB | pdb_00001nob

1P69 | pdb_00001p69

1P6A | pdb_00001p6a

1TYF | pdb_00001tyf

1YG6 | pdb_00001yg6

1YG8 | pdb_00001yg8

2B3U | pdb_00002b3u

2B3V | pdb_00002b3v

2B4B | pdb_00002b4b

2B4D | pdb_00002b4d

2B58 | pdb_00002b58

2B5G | pdb_00002b5g

3G7C | pdb_00003g7c