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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Chen, X."

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Search Summary

This query matches 157 Structures.

Refinements

Structure Determination Methodology

experimental (157)

Scientific Name of Source Organism

	Homo sapiens (94)
	Human immunodeficiency virus 1 (62)
	Severe acute respiratory syndrome coronavirus 2 (17)
	Mus musculus (13)
	Lama glama (8)
	Escherichia coli (7)
	Methanocaldococcus jannaschii (5)
	Macaca mulatta (4)
	Oryctolagus cuniculus (4)
	Rattus norvegicus (4)

More...

Taxonomy

	Eukaryota (125)
	Riboviria (92)
	Bacteria (14)
	Archaea (6)
	other sequences (2)
	Duplodnaviria (1)
	Eukaryota (eukaryotes) (1)

Experimental Method

	X-RAY DIFFRACTION (131)
	ELECTRON MICROSCOPY (24)
	SOLUTION NMR (2)

Polymer Entity Type

	Protein (157)
	DNA (3)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (31)
	2.0 - 2.5 (50)
	2.5 - 3.0 (37)
	3.0 - 3.5 (19)
	3.5 - 4.0 (13)
	4.0 - 4.5 (2)
	> 4.5 (2)

Release Date

	2000 - 2004 (17)
	2005 - 2009 (26)
	2010 - 2014 (34)
	2015 - 2019 (41)
	2020 - 2024 (39)

Enzyme Classification Name

	Transferases (32)
	Hydrolases (6)
	Oxidoreductases (4)
	Translocases (4)
	Ligases (3)
	Lyases (2)

Membrane Protein Annotation

mpstruc (6)

Symmetry Type

	Asymmetric (117)
	Cyclic (37)
	Dihedral (11)

SCOP Classification

	All beta proteins (66)
	Alpha and beta proteins (a+b) (40)
	Alpha and beta proteins (a/b) (17)
	Artifacts (18)
	Coiled coil proteins (1)
	Small proteins (1)

AllSelected

1 to 25 of 157 Structures

Page 1 of 7

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1F48 \| pdb_00001f48	Download File View File

CRYSTAL STRUCTURE OF THE ESCHERICHIA COLI ARSENITE-TRANSLOCATING ATPASE

Zhou, T., Radaev, S., Rosen, B.P., Gatti, D.L.

(2000) EMBO J 19: 4838-4845

Released	2000-09-13
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli
Macromolecule	ARSENITE-TRANSLOCATING ATPASE (protein)
Unique Ligands	ADP, CD, CL, MG, SB, SBO

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1FWK \| pdb_00001fwk	Download File View File

CRYSTAL STRUCTURE OF HOMOSERINE KINASE COMPLEXED WITH ADP

Zhou, T., Daugherty, M., Grishin, N.V., Osterman, A.L., Zhang, H.

(2000) Structure 8: 1247-1257

Released	2000-12-20
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Methanocaldococcus jannaschii
Macromolecule	HOMOSERINE KINASE (protein)
Unique Ligands	ADP, MG

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1FWL \| pdb_00001fwl	Download File View File

CRYSTAL STRUCTURE OF HOMOSERINE KINASE

Zhou, T., Daugherty, M., Grishin, N.V., Osterman, A.L., Zhang, H.

(2000) Structure 8: 1247-1257

Released	2000-12-20
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Methanocaldococcus jannaschii
Macromolecule	HOMOSERINE KINASE (protein)

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1H72 \| pdb_00001h72	Download File View File

CRYSTAL STRUCTURE OF HOMOSERINE KINASE COMPLEXED WITH HSE

Krishna, S.S., Zhou, T., Daugherty, M., Osterman, A.L., Zhang, H.

(2001) Biochemistry 40: 10810

Released	2001-09-13
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Methanocaldococcus jannaschii
Macromolecule	HOMOSERINE KINASE (protein)
Unique Ligands	ANP, HSE, TRS

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1H73 \| pdb_00001h73	Download File View File

CRYSTAL STRUCTURE OF HOMOSERINE KINASE COMPLEXED WITH THREONINE

Krishna, S.S., Zhou, T., Daugherty, M., Osterman, A.L., Zhang, H.

(2001) Biochemistry 40: 10810

Released	2001-09-13
Method	X-RAY DIFFRACTION 2 Å
Organisms	Methanocaldococcus jannaschii
Macromolecule	HOMOSERINE KINASE (protein)
Unique Ligands	ANP, THR

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1H74 \| pdb_00001h74	Download File View File

CRYSTAL STRUCTURE OF HOMOSERINE KINASE COMPLEXED WITH ILE

Krishna, S.S., Zhou, T., Daugherty, M., Osterman, A.L., Zhang, H.

(2001) Biochemistry 40: 10810

Released	2001-11-28
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Methanocaldococcus jannaschii
Macromolecule	HOMOSERINE KINASE (protein)
Unique Ligands	ADP, AGS, ILE, MG

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1IHU \| pdb_00001ihu	Download File View File

CRYSTAL STRUCTURE OF THE ESCHERICHIA COLI ARSENITE-TRANSLOCATING ATPASE IN COMPLEX WITH MG-ADP-ALF3

Zhou, T., Radaev, S., Rosen, B.P., Gatti, D.L.

(2001) J Biological Chem 276: 30414-30422

Released	2001-09-12
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Escherichia coli
Macromolecule	ARSENICAL PUMP-DRIVING ATPASE (protein)
Unique Ligands	ADP, AF3, CD, CL, MG, TAS

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1II0 \| pdb_00001ii0	Download File View File

CRYSTAL STRUCTURE OF THE ESCHERICHIA COLI ARSENITE-TRANSLOCATING ATPASE

Zhou, T., Radaev, S., Rosen, B.P., Gatti, D.L.

(2001) J Biological Chem 276: 30414-30422

Released	2001-09-12
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Escherichia coli
Macromolecule	ARSENICAL PUMP-DRIVING ATPASE (protein)
Unique Ligands	ADP, ATP, CD, CL, MG, TAS

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1II9 \| pdb_00001ii9	Download File View File

CRYSTAL STRUCTURE OF THE ESCHERICHIA COLI ARSENITE-TRANSLOCATING ATPASE IN COMPLEX WITH AMP-PNP

Zhou, T., Radaev, S., Gatti, D.L., Rosen, B.P.

(2001) J Biological Chem 276: 30414-30422

Released	2001-09-12
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Escherichia coli
Macromolecule	ARSENICAL PUMP-DRIVING ATPASE (protein)
Unique Ligands	ADP, ANP, CD, CL, MG, TAS

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1K4K \| pdb_00001k4k	Download File View File

Crystal structure of E. coli Nicotinic acid mononucleotide adenylyltransferase

Zhang, H., Zhou, T., Kurnasov, O., Cheek, S., Grishin, N.V., Osterman, A.L.

(2002) Structure 10: 69-79

Released	2002-10-08
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli
Macromolecule	Nicotinic acid mononucleotide adenylyltransferase (protein)
Unique Ligands	XE

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1K4M \| pdb_00001k4m	Download File View File

Crystal structure of E.coli nicotinic acid mononucleotide adenylyltransferase complexed to deamido-NAD

Zhang, H., Zhou, T., Kurnasov, O., Cheek, S., Grishin, N.V., Osterman, A.

(2002) Structure 10: 69-79

Released	2002-10-08
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Escherichia coli
Macromolecule	NaMN adenylyltransferase (protein)
Unique Ligands	CIT, NAD

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1KQN \| pdb_00001kqn	Download File View File

Crystal structure of NMN/NaMN adenylyltransferase complexed with NAD

Zhou, T., Kurnasov, O., Tomchick, D.R., Binns, D.D., Grishin, N.V., Marquez, V.E., Osterman, A.L., Zhang, H.

(2003) J Biological Chem 277: 13148-13154

Released	2003-01-07
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	NICOTINAMIDE MONONUCLEOTIDE ADENYLYL TRANSFERASE (protein)
Unique Ligands	NAD, XE

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1KQO \| pdb_00001kqo	Download File View File

Crystal structure of NMN/NaMN adenylyltransferase complexed with deamido-NAD

Zhou, T., Kurnasov, O., Tomchick, D.R., Binns, D.D., Grishin, N.V., Marquez, V.E., Osterman, A.L., Zhang, H.

(2002) J Biological Chem 277: 13148-13154

Released	2003-01-07
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	NICOTINAMIDE MONONUCLEOTIDE ADENYLYL TRANSFERASE (protein)
Unique Ligands	DND

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1KR2 \| pdb_00001kr2	Download File View File

CRYSTAL STRUCTURE OF HUMAN NMN/NAMN ADENYLYL TRANSFERASE COMPLEXED WITH TIAZOFURIN ADENINE DINUCLEOTIDE (TAD)

Zhou, T., Kurnasov, O., Tomchick, D.R., Binns, D.D., Grishin, N.V., Marquez, V.E., Osterman, A.L., Zhang, H.

(2002) J Biological Chem 277: 13148-13154

Released	2003-01-08
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	NICOTINAMIDE MONONUCLEOTIDE ADENYLYL TRANSFERASE (protein)
Unique Ligands	TAD

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1PS5 \| pdb_00001ps5	Download File View File

STRUCTURE OF THE MONOCLINIC C2 FORM OF HEN EGG-WHITE LYSOZYME AT 2.0 ANGSTROMS RESOLUTION

Majeed, S., Ofek, G., Belachew, A., Huang, C., Zhou, T., Kwong, P.D.

(2003) Structure 11: 1061-1070

Released	2003-09-09
Method	X-RAY DIFFRACTION 2 Å
Organisms	Gallus gallus
Macromolecule	Lysozyme C (protein)
Unique Ligands	SO4

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1U5Q \| pdb_00001u5q	Download File View File

Crystal Structure of the TAO2 Kinase Domain: Activation and Specifity of a Ste20p MAP3K

Zhou, T., Raman, M., Gao, Y., Earnest, S., Chen, Z., Machius, M., Cobb, M.H., Goldsmith, E.J.

(2004) Structure 12: 1891-1900

Released	2004-10-12
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Rattus norvegicus
Macromolecule	serine/threonine protein kinase TAO2 (protein)
Unique Ligands	CA

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1U5R \| pdb_00001u5r	Download File View File

Crystal Structure of the TAO2 Kinase Domain: Activation and Specifity of a Ste20p MAP3K

Zhou, T., Raman, M., Gao, Y., Earnest, S., Chen, Z., Machius, M., Cobb, M.H., Goldsmith, E.J.

(2004) Structure 12: 1891-1900

Released	2004-10-12
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Rattus norvegicus
Macromolecule	serine/threonine protein kinase TAO2 (protein)
Unique Ligands	ATP, CA, MG

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2ADG \| pdb_00002adg	Download File View File

Crystal structure of monoclonal anti-CD4 antibody Q425

Zhou, T., Hamer, D.H., Hendrickson, W.A., Sattentau, Q.J., Kwong, P.D.

(2005) Proc Natl Acad Sci U S A 102: 14575-14580

Released	2005-09-20
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Mus musculus
Macromolecule	Q425 Fab Light chain (protein) Q425 Fab heavy chain (protein)

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2ADI \| pdb_00002adi	Download File View File

Crystal structure of monoclonal anti-CD4 antibody Q425 in complex with Barium

Zhou, T., Hamer, D.H., Hendrickson, W.A., Sattentau, Q.J., Kwong, P.D.

(2005) Proc Natl Acad Sci U S A 102: 14575-14580

Released	2005-09-20
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Mus musculus
Macromolecule	Q425 Fab Heavy chain (protein) Q425 Fab Light chain (protein)
Unique Ligands	BA, TRS

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2ADJ \| pdb_00002adj	Download File View File

Crystal structure of monoclonal anti-CD4 antibody Q425 in complex with Calcium

Zhou, T., Hamer, D.H., Hendrickson, W.A., Sattentau, Q.J., Kwong, P.D.

(2005) Proc Natl Acad Sci U S A 102: 14575-14580

Released	2005-09-20
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Mus musculus
Macromolecule	Q425 Fab Heavy chain (protein) Q425 Fab Light chain (protein)
Unique Ligands	CA

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2GCD \| pdb_00002gcd	Download File View File

TAO2 kinase domain-staurosporine structure

Zhou, T., Sun, L., Gao, Y., Earnest, S., Cobb, M.H., Goldsmith, E.J.

(2006) Acta Biochim Biophys Sinica 38: 385-392

Released	2006-09-05
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Rattus norvegicus
Macromolecule	Serine/threonine-protein kinase TAO2 (protein)
Unique Ligands	STU

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2GPH \| pdb_00002gph	Download File View File

Docking motif interactions in the MAP kinase ERK2

Zhou, T., Sun, L., Humphreys, J., Goldsmith, E.J.

(2006) Structure 14: 1011-1019

Released	2006-07-04
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens Rattus norvegicus
Macromolecule	Mitogen-activated protein kinase 1 (protein) Tyrosine-protein phosphatase non-receptor type 7 (protein)

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2NXY \| pdb_00002nxy	Download File View File

HIV-1 gp120 Envelope Glycoprotein(S334A) Complexed with CD4 and Antibody 17b

Zhou, T., Xu, L., Dey, B., Hessell, A.J., Van Ryk, D., Xiang, S.H., Yang, X., Zhang, M.Y., Zwick, M.B., Arthos, J., Burton, D.R., Dimitrov, D.S., Sodroski, J., Wyatt, R., Nabel, G.J., Kwong, P.D.

(2007) Nature 445: 732-737

Released	2007-02-06
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	ANTIBODY 17B, HEAVY CHAIN (protein) ANTIBODY 17B, LIGHT CHAIN (protein) ENVELOPE GLYCOPROTEIN GP120 (protein) T-cell surface glycoprotein CD4 (protein)
Unique Ligands	HEZ, NAG, TRS

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2NXZ \| pdb_00002nxz	Download File View File

HIV-1 gp120 Envelope Glycoprotein (T257S, S334A, S375W) Complexed with CD4 and Antibody 17b

Zhou, T., Xu, L., Dey, B., Hessell, A.J., Van Ryk, D., Xiang, S.H., Yang, X., Zhang, M.Y., Zwick, M.B., Arthos, J., Burton, D.R., Dimitrov, D.S., Sodroski, J., Wyatt, R., Nabel, G.J., Kwong, P.D.

(2007) Nature 445: 732-737

Released	2007-02-06
Method	X-RAY DIFFRACTION 2.04 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	ANTIBODY 17B, HEAVY CHAIN (protein) ANTIBODY 17B, LIGHT CHAIN (protein) ENVELOPE GLYCOPROTEIN GP120 (protein) T-cell surface glycoprotein CD4 (protein)
Unique Ligands	EDO, HEZ, IPA, NAG
Unique branched monosaccharides	FRU, GLC

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2NY0 \| pdb_00002ny0	Download File View File

HIV-1 gp120 Envelope Glycoprotein (M95W, W96C, T257S, V275C, S334A, S375W, A433M) Complexed with CD4 and Antibody 17b

Zhou, T., Xu, L., Dey, B., Hessell, A.J., Van Ryk, D., Xiang, S.H., Yang, X., Zhang, M.Y., Zwick, M.B., Arthos, J., Burton, D.R., Dimitrov, D.S., Sodroski, J., Wyatt, R., Nabel, G.J., Kwong, P.D.

(2007) Nature 445: 732-737

Released	2007-02-06
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	ANTIBODY 17B, HEAVY CHAIN (protein) ANTIBODY 17B, LIGHT CHAIN (protein) ENVELOPE GLYCOPROTEIN GP120 (protein) T-cell surface glycoprotein CD4 (protein)
Unique Ligands	HEZ, NAG

1 to 25 of 157 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1F48 | pdb_00001f48

1FWK | pdb_00001fwk

1FWL | pdb_00001fwl

1H72 | pdb_00001h72

1H73 | pdb_00001h73

1H74 | pdb_00001h74

1IHU | pdb_00001ihu

1II0 | pdb_00001ii0

1II9 | pdb_00001ii9

1K4K | pdb_00001k4k

1K4M | pdb_00001k4m

1KQN | pdb_00001kqn

1KQO | pdb_00001kqo

1KR2 | pdb_00001kr2

1PS5 | pdb_00001ps5

1U5Q | pdb_00001u5q

1U5R | pdb_00001u5r

2ADG | pdb_00002adg

2ADI | pdb_00002adi

2ADJ | pdb_00002adj

2GCD | pdb_00002gcd

2GPH | pdb_00002gph

2NXY | pdb_00002nxy

2NXZ | pdb_00002nxz

2NY0 | pdb_00002ny0