Ligand validation:4OXK


NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE

NAD is a Ligand Of Interest in 4OXK designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4OXK_NAD_B_301Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4OXK_NAD_B_301Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4OXK_NAD_B_301Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4OXK_NAD_B_301 96% 8% 0.076 0.9833.11 1.65 17 700100%1
4OXK_NAD_A_300 95% 8% 0.078 0.9843.08 1.59 17 700100%1
4OXK_NAD_D_300 95% 8% 0.075 0.983.09 1.56 17 600100%1
4OXK_NAD_C_300 95% 8% 0.076 0.9793.08 1.6 17 600100%1
2X23_NAD_A_1270 100% 24% 0.045 0.9921.42 1.68 5 900100%1
4TZK_NAD_A_500 99% 63% 0.058 0.9880.64 0.79 - 100100%0.99
4D0S_NAD_C_1270 99% 62% 0.054 0.9820.69 0.76 - 100100%1
5MTR_NAD_E_301 99% 37% 0.057 0.9841.39 1.11 3 510100%1
5MTP_NAD_A_301 98% 47% 0.062 0.9860.86 1.18 2 500100%1
3CMC_NAD_R_408 100% 20% 0.016 0.9981.63 1.74 4 900100%1
4RQU_NAD_B_403 100% 3% 0.019 0.9973.51 2.61 13 18 00100%1
3EC7_NAD_A_400 100% 18% 0.025 0.9951.8 1.74 5 810100%1
4URF_NAD_A_1249 100% 44% 0.034 0.9950.96 1.2 2 400100%1
2C5A_NAD_B_1374 100% 23% 0.039 0.9921.34 1.84 6 710100%1