Ligand validation:4DX7


D10: DECANE



Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4DX7_D10_C_1104Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4DX7_D10_C_1104Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4DX7_D10_C_1104Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4DX7_D10_C_1104 17% 75% 0.177 0.7540.25 0.73 - -00100%1
4DX7_D10_B_1105 17% 69% 0.184 0.7590.32 0.84 - -10100%1
4DX7_D10_A_1108 14% 73% 0.184 0.7320.28 0.76 - -20100%1
4DX7_D10_A_1109 2% 76% 0.29 0.545 0.25 0.69 - -00100%1
5NC5_D10_C_1104 55% 71% 0.174 0.9430.53 0.58 - -00100%1
4DX5_D10_B_1105 24% 67% 0.192 0.8190.37 0.9 - -10100%1
4XU5_D10_A_302 63% 81% 0.121 0.9170.29 0.52 - -00100%1
5AWZ_D10_A_306 56% 77% 0.118 0.8870.11 0.78 - -00100%1
1O84_D10_A_1074 51% 71% 0.18 0.9340.24 0.86 - -60100%1
3HAP_D10_A_409 38% 84% 0.135 0.8340.22 0.54 - -00100%1
1N6D_D10_G_2101 34% 60% 0.244 0.9270.52 1 - -20100%1