Ligand validation:3QPW


ADP: ADENOSINE-5'-DIPHOSPHATE

ADP is a Ligand Of Interest in 3QPW designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3QPW_ADP_A_800Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3QPW_ADP_A_800Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3QPW_ADP_A_800Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
3QPW_ADP_A_800 92% 37% 0.098 0.9890.86 1.58 1 710100%1
6ETJ_ADP_A_604 89% 38% 0.106 0.9860.95 1.46 1 440100%1
3QPV_ADP_A_700 85% 36% 0.118 0.9851.07 1.43 2 520100%1
2DWO_ADP_A_700 85% 32% 0.102 0.9671.36 1.35 4 310100%1
2AXN_ADP_A_738 83% 34% 0.117 0.9771.29 1.3 4 210100%1
4MA4_ADP_A_601 83% 25% 0.124 0.9841.36 1.7 3 610100%1
3KB1_ADP_A_301 100% 22% 0.021 0.9962.06 1.21 6 410100%1
5GZA_ADP_A_401 100% 2% 0.019 0.9973.36 3.39 13 1110100%1
5KHW_ADP_A_1201 100% 41% 0.023 0.9951.1 1.2 1 200100%1
8VZA_ADP_A_603 100% 37% 0.024 0.9950.96 1.51 1 500100%1
1PHP_ADP_A_396 100% 24% 0.026 0.9951.29 1.8 3 1110100%1