6WU3
Structure of VcINDY-Na+ in amphipol
External Resource: Annotation
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Na_sulph_symp | e6wu3A1 | A: alpha complex topology | X: dicarboxylate/sodium symporter (From Topology) | H: dicarboxylate/sodium symporter (From Topology) | T: dicarboxylate/sodium symporter | F: Na_sulph_symp | ECOD (1.6) |
B [auth C] | Na_sulph_symp | e6wu3C1 | A: alpha complex topology | X: dicarboxylate/sodium symporter (From Topology) | H: dicarboxylate/sodium symporter (From Topology) | T: dicarboxylate/sodium symporter | F: Na_sulph_symp | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B [auth C] | PF03600 | Citrate transporter (CitMHS) | Citrate transporter | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A, B [auth C] | VcINDY |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B [auth C] | IPR004680 | Citrate transporter-like domain | Domain |
A, B [auth C] | IPR001898 | Solute carrier family 13 | Family |
A, B [auth C] | IPR031312 | Sodium/sulphate symporter, conserved site | Conserved Site |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Ion transporter superfamily | Divalent anion:Na+ symporter (DASS) family |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Solute Carrier (SLC) Transporter Superfamily | Dicarboxylate/Sodium Symporter with bound Na+ in amphipol |