3B8T
Crystal structure of Escherichia coli alaine racemase mutant P219A
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Ala_racemase_C | e3b8tA1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: Ala_racemase_C | ECOD (1.6) |
A | Ala_racemase_N | e3b8tA2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Ala_racemase_N | ECOD (1.6) |
B | Ala_racemase_C | e3b8tB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: Ala_racemase_C | ECOD (1.6) |
B | Ala_racemase_N | e3b8tB2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Ala_racemase_N | ECOD (1.6) |
D | Ala_racemase_C | e3b8tD1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: Ala_racemase_C | ECOD (1.6) |
D | Ala_racemase_N | e3b8tD2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Ala_racemase_N | ECOD (1.6) |
C | Ala_racemase_C | e3b8tC1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: Ala_racemase_C | ECOD (1.6) |
C | Ala_racemase_N | e3b8tC2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Ala_racemase_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.40.37.10 | Mainly Beta | Beta Barrel | Lyase, Ornithine Decarboxylase | Chain A, domain 1 | CATH (4.3.0) |
A | 3.20.20.10 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Alanine racemase | CATH (4.3.0) |
B | 2.40.37.10 | Mainly Beta | Beta Barrel | Lyase, Ornithine Decarboxylase | Chain A, domain 1 | CATH (4.3.0) |
B | 3.20.20.10 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Alanine racemase | CATH (4.3.0) |
D | 2.40.37.10 | Mainly Beta | Beta Barrel | Lyase, Ornithine Decarboxylase | Chain A, domain 1 | CATH (4.3.0) |
D | 3.20.20.10 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Alanine racemase | CATH (4.3.0) |
C | 2.40.37.10 | Mainly Beta | Beta Barrel | Lyase, Ornithine Decarboxylase | Chain A, domain 1 | CATH (4.3.0) |
C | 3.20.20.10 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Alanine racemase | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR029066 | PLP-binding barrel | Homologous Superfamily | |
IPR020622 | Alanine racemase, pyridoxal-phosphate attachment site | Binding Site | |
IPR011079 | Alanine racemase, C-terminal | Domain | |
IPR009006 | Alanine racemase/group IV decarboxylase, C-terminal | Homologous Superfamily | |
IPR001608 | Alanine racemase, N-terminal | Domain | |
IPR000821 | Alanine racemase | Family |