Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad2fkwa_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits (Rhodoblastus acidophilus ) [TaxId: 1074 ], SCOPe (2.08)
Cd2fkwc_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits (Rhodoblastus acidophilus ) [TaxId: 1074 ], SCOPe (2.08)
Ed2fkwe_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits (Rhodoblastus acidophilus ) [TaxId: 1074 ], SCOPe (2.08)
Id2fkwi_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits (Rhodoblastus acidophilus ) [TaxId: 1074 ], SCOPe (2.08)
Kd2fkwk_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits (Rhodoblastus acidophilus ) [TaxId: 1074 ], SCOPe (2.08)
Od2fkwo_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits (Rhodoblastus acidophilus ) [TaxId: 1074 ], SCOPe (2.08)
Q [auth R]d2fkwr_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits (Rhodoblastus acidophilus ) [TaxId: 1074 ], SCOPe (2.08)
Gd2fkwg_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits (Rhodoblastus acidophilus ) [TaxId: 1074 ], SCOPe (2.08)
Md2fkwm_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits (Rhodoblastus acidophilus ) [TaxId: 1074 ], SCOPe (2.08)
Bd2fkwb_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits (Rhodoblastus acidophilus ) [TaxId: 1074 ], SCOPe (2.08)
Hd2fkwh_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits (Rhodoblastus acidophilus ) [TaxId: 1074 ], SCOPe (2.08)
Jd2fkwj_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits (Rhodoblastus acidophilus ) [TaxId: 1074 ], SCOPe (2.08)
Ld2fkwl_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits (Rhodoblastus acidophilus ) [TaxId: 1074 ], SCOPe (2.08)
Nd2fkwn_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits (Rhodoblastus acidophilus ) [TaxId: 1074 ], SCOPe (2.08)
Pd2fkwp_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits (Rhodoblastus acidophilus ) [TaxId: 1074 ], SCOPe (2.08)
R [auth S]d2fkws_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits (Rhodoblastus acidophilus ) [TaxId: 1074 ], SCOPe (2.08)
Dd2fkwd_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits (Rhodoblastus acidophilus ) [TaxId: 1074 ], SCOPe (2.08)
Fd2fkwf_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits (Rhodoblastus acidophilus ) [TaxId: 1074 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyLight-harvesting complex subunits 8043857 3000199 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyLight-harvesting complex subunits 8043857 3000199 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyLight-harvesting complex subunits 8043857 3000199 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyLight-harvesting complex subunits 8043857 3000199 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyLight-harvesting complex subunits 8043857 3000199 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyLight-harvesting complex subunits 8043857 3000199 SCOP2B (2022-06-29)
Q [auth R]SCOP2B SuperfamilyLight-harvesting complex subunits 8043857 3000199 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyLight-harvesting complex subunits 8043857 3000199 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyLight-harvesting complex subunits 8043857 3000199 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ALHC_likee2fkwA1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
CLHC_likee2fkwC1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
ELHC_likee2fkwE1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
ILHC_likee2fkwI1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
KLHC_likee2fkwK1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
OLHC_likee2fkwO1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
Q [auth R]LHC_likee2fkwR1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
GLHC_likee2fkwG1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
MLHC_likee2fkwM1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
BLHC_likee2fkwB1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
HLHC_likee2fkwH1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
JLHC_likee2fkwJ1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
LLHC_likee2fkwL1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
NLHC_likee2fkwN1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
PLHC_likee2fkwP1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
R [auth S]LHC_likee2fkwS1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
DLHC_likee2fkwD1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
FLHC_likee2fkwF1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A4.10.220.20 Few Secondary Structures Irregular Light-harvesting Protein Light-harvesting complexCATH (4.3.0)
C4.10.220.20 Few Secondary Structures Irregular Light-harvesting Protein Light-harvesting complexCATH (4.3.0)
E4.10.220.20 Few Secondary Structures Irregular Light-harvesting Protein Light-harvesting complexCATH (4.3.0)
I4.10.220.20 Few Secondary Structures Irregular Light-harvesting Protein Light-harvesting complexCATH (4.3.0)
K4.10.220.20 Few Secondary Structures Irregular Light-harvesting Protein Light-harvesting complexCATH (4.3.0)
O4.10.220.20 Few Secondary Structures Irregular Light-harvesting Protein Light-harvesting complexCATH (4.3.0)
Q [auth R]4.10.220.20 Few Secondary Structures Irregular Light-harvesting Protein Light-harvesting complexCATH (4.3.0)
G4.10.220.20 Few Secondary Structures Irregular Light-harvesting Protein Light-harvesting complexCATH (4.3.0)
M4.10.220.20 Few Secondary Structures Irregular Light-harvesting Protein Light-harvesting complexCATH (4.3.0)
B1.20.5.250 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
H1.20.5.250 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
J1.20.5.250 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
L1.20.5.250 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
N1.20.5.250 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
P1.20.5.250 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
R [auth S]1.20.5.250 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
D1.20.5.250 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
F1.20.5.250 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
C,
E,
G,
I,
PF00556Antenna complex alpha/beta subunit (LHC)Antenna complex alpha/beta subunit- Domain
B,
D,
F,
H,
J,
PF00556Antenna complex alpha/beta subunit (LHC)Antenna complex alpha/beta subunit- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
C,
E,
G,
I,
Light-harvesting protein B-800/850, alpha chain
B,
D,
F,
H,
J,
Light-harvesting protein B-800/850, beta chain

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B, C, D, E
PDBTMAnnotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

ChainsExternal LinkComment
A, B, C, D, E
MemProtMDAnnotated as membrane protein by MemProtMD

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A,
C,
E,
G,
I,
CXM Parent Component: MET

RESIDAA0363 , AA0493

PSI-MOD :  N-carboxy-L-methionine MOD:00368 , N-(dihydroxymethyl)-L-methionine (fMet) MOD:01446 , N-(dihydroxymethyl)-L-methionine (Met) MOD:01447